Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_00591
Subject:
NR_033907.2
Aligned Length:
1676
Identities:
557
Gaps:
1091

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATTTGGGTGAAGACGGAGGTGGGTTCTGGACAGACCTACGCTGTCAGGGAGTGTTTACTTCGCCTACACTTCTG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TTCCTCCCCGCCCTGGTGCTGCTCCAGGTCACATACTCGTCCTGAGCTGGCTTCAGCCTCTGCACAGAAGTCTC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CCGGAGCCATGGCCTAGTACTCTTATGTGAAGTCTACCAAGCTTGTGCTCAAGGGAACCGAGGTGAAGAGCTGG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GTCCTGCAGCTCCGGCGGGAGCCTCCTCAGTTCTTTTCGGACGCACTCCACCCCCGCGAATCCGGTGGGAGCCG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TGGTGCGGAGAGCCGGCTTCGTGGCCTCCCAGGCTTCGCTCTGACCCTGTCTGGGCTGGACGGAGGCCGGACCA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  CCCTTCCTGGCGCCTGTGCAGAGAGGGGAAGCCTCCTGCGCGGACGACCCTGGAAACAGGATAGACAGGCGGGT  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GACCCGTGGCCCCGTACCCACGAGTTTGGGTCCCCTGAGGCATCTCTCCAGGCCTCTGCCTGATTTGCCTGAGG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  TTGACTGTACATACAAATATTGAGCATTTCCTCCTGGCCTCCGTGATAAACAGAAGTTTTGATATTGTTAGGCG  592

Query    1  -------------------------------------ATGGCC--GAGTACTCCT-ACGTGAAGTCTACCAAGC  34
                                                 .||.||  |||.|| ||| .||.|.|||||..|   |
Sbjct  593  AGATGGAAAGAAAGTATCAAGGAGTGAGCTGAAGCCACTGCCCTTGAGAAC-CCTCTCGAGGAGTCTGGC---C  662

Query   35  TCGTGCTCAAGGGAACCAAGACGAA----GAGTAAGAAGAAAAAGAGCAAAGATAAGAAAAGAAAAAGAGAAGA  104
            ||.||   ||  ||..|.|||..||    .|||||||||||||||||||||||||||||.||||||||||||||
Sbjct  663  TCATG---AA--GATGCCAGAATAAATGGCAGTAAGAAGAAAAAGAGCAAAGATAAGAAGAGAAAAAGAGAAGA  731

Query  105  AGATGAAGAAACCCAGCTTGATATTGT-----------------------------------------------  131
            ||||||||||| ||||||||||| |||                                               
Sbjct  732  AGATGAAGAAA-CCAGCTTGATA-TGTTGGAACGCAGCTGCTCACCAGCAACGGAACAAAGCTGGACGGAGAAT  803

Query  132  --------------------------------------------------------------------------  131
                                                                                      
Sbjct  804  GACTTTGAAGAGCTGAGAGAAGAAGGCTTCAGATGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAA  877

Query  132  --------------------------------------------------TGGAATCTGGTGGACAGTAACAAA  155
                                                              ||||||||||||.|||||||||||
Sbjct  878  AGGCAAAGAAGTTGAAAACTTTGAAAAAAATAAATATACATTTCTTAACGTGGAATCTGGTGAACAGTAACAAA  951

Query  156  CTTTGGTGAAATTTCAGGAACCATAGCCATTGAAATGGATAAGGGAACCTATATACATGCACTCGACAATGGTC  229
            ||||||||||||||||||||||.|||||||||||||||||.|||||||||||||||||||||||||||||||||
Sbjct  952  CTTTGGTGAAATTTCAGGAACCCTAGCCATTGAAATGGATGAGGGAACCTATATACATGCACTCGACAATGGTC  1025

Query  230  TTTTTACCCTGGGAGCTCCACACAAAGAAGTTGATGAGGGCCCTAGTCCTCCAGAGCAGTTTACGGCTGTCAAA  303
            ||||||||||||||||||||||||||||||                                            
Sbjct 1026  TTTTTACCCTGGGAGCTCCACACAAAGAAG--------------------------------------------  1055

Query  304  TTATCTGATTCCAGAATCGCCCTGAAGTCTGGCTATGGAAAATATCTTGGTATAAATTCAGATGGACTTGTTGT  377
                                                                                      
Sbjct 1056  --------------------------------------------------------------------------  1055

Query  378  TGGGCGTTCAGATGCAATTGGACCAAGAGAACAATGGGAACCAGTCTTTCAAAATGGGAAAATGGCTTTGTTGG  451
                                                                   |||||||||||||||||||
Sbjct 1056  -------------------------------------------------------GGGAAAATGGCTTTGTTGG  1074

Query  452  CCTCAAATAGCTGCTTTATTAGATGCAATGAAGCAGGGGACATAGAAGCAAAAAGTAAAACAGCAGGAGAAGAA  525
            ||||||||||.|||||||||||||.|||||||||||||||||||||||||||||||||||||||   |||||||
Sbjct 1075  CCTCAAATAGATGCTTTATTAGATACAATGAAGCAGGGGACATAGAAGCAAAAAGTAAAACAGC---AGAAGAA  1145

Query  526  GAAATGATCAAGATTAGATCCTGTGCTGAAAGAGAAACCAAGAAAAAAGATGACATTCCAGAAGAAGACAAAGG  599
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1146  GAAATGATCAAGATTAGATCCTGTGCTGAAAGAGAAACCAAGAAAAAAGATGACATTCCAGAAGAAGACAAAGG  1219

Query  600  AAATGTAAAACAATGTGAAATCAATTATGTAAAGAAATTTCAGAGCTTCCAAGACCACAAACTTAAAATAAGTA  673
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1220  AAATGTAAAACAATGTGAAATCAATTATGTAAAGAAATTTCAGAGCTTCCAAGACCACAAACTTAAAATAAGTA  1293

Query  674  AAGAAGACAGTAAAATTCTTAAAAAGGCTCGGAAAGATGGATTTTTGCATGAGACGCTTCTGGACAGGAGAGCC  747
            |||||| |||||||||||||||||||...|.|||||||||||||||||||||||.||||||||||| ||||.||
Sbjct 1294  AAGAAG-CAGTAAAATTCTTAAAAAGATGCAGAAAGATGGATTTTTGCATGAGATGCTTCTGGACA-GAGAACC  1365

Query  748  AAATTGAAAGCCGACAGATACTGCAAG-----------------------------------------------  774
            ||||||||||||||||||||||||||.                                               
Sbjct 1366  AAATTGAAAGCCGACAGATACTGCAAATGACTGGGATTTTTGTTTCTGCCTTATCTTTTTGTGTTTTTTTCTGA  1439

Query  775  ------------------------------------------------  774
                                                            
Sbjct 1440  ATAAAATATTCAGAGGAAATGCTTTTACGGAAAAAAAAAAAAAAAAAA  1487

GPP Web Portal Terms of Service

Effective Date: December 8, 2025
By using this site, you agree to our terms and conditions below.

Overview of Terms

The data made available on this website were generated for research purposes and are not intended for clinical or commercial uses. Commercial use (or other use for profit-making purposes) of the GPP Web Portal and its tools, is not permitted under these terms and may require a separate license agreement from Broad or its contributors. For more information, please contact partnering@broadinstitute.org.

The original data may be subject to rights claimed by third parties, including but not limited to, patent, copyright, other intellectual property rights, biodiversity-related access and benefit-sharing rights. It is the responsibility of users of Broad Institute services to ensure that their use of the data does not infringe any of the rights of such third parties.

Any questions or comments concerning these Terms of Use can be addressed to: legal@broadinstitute.org.

By accessing and viewing this GPP Web Portal, you agree to the following terms and conditions:

Attribution

You agree to acknowledge the Broad Institute (e.g., in publications, services or products) for any of your use of its online services, databases or software in accordance with good scientific practice. You agree to use the acknowledgment wording provided for the relevant tools as indicated on the FAQ for each tool.

Updating the Terms of Use

We reserve the right to update these Terms of Use at any time. When alterations are inevitable, we will attempt to give reasonable notice of any changes by placing a notice on our website, but you may wish to check each time you use the website. The date of the most recent revision will appear on this, the "GPP Web Portal Terms of Use" page. If you do not agree to these changes, please do not continue to use our online services. We will also make available an archived copy of the previous Terms of Use for comparison.

Indemnification and Disclaimer of Warranties

You are using this GPP Web Portal at your own risk, and you hereby agree to hold Broad and its contributors and their trustees, directors, officers, employees, and affiliated investigators harmless for any third party claims which may arise from your use of the GPP Web Portal, the tools available therein, or any portion thereof. Further, you agree to indemnify Broad, its contributors, and its and their trustees, directors, officers, employees, affiliated investigators, students, and affiliates for any loss, costs, claims, damages, or other liabilities arising from any unpermitted commercial or profit-making use you make of the GPP Web Portal. The GPP Web Portal is a research tool and is provided "as is". Broad does not represent that the GPP Web Portal is free of errors or bugs or suitable for any particular tasks.

ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE, NONINFRINGEMENT, OR THE ABSENCE OF LATENT OR OTHER DEFECTS ARE DISCLAIMED. IN NO EVENT SHALL BROAD OR ITS CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THE GPP WEB PORTAL, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.

Governing Law

The terms and conditions herein shall be construed, governed, interpreted, and applied in accordance with the internal laws of the Commonwealth of Massachusetts, U.S.A. Furthermore, by accessing, downloading, or using the Database, You consent to the personal jurisdiction of, and venue in, the state and federal courts within Massachusetts with respect to Your download or use of the Database.