Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_00683
Subject:
XM_024450727.1
Aligned Length:
1659
Identities:
1452
Gaps:
198

Alignment

Query    1  ATGAGGGATAGCTCGGCCCCCAGCTCGGCCTCCTCGTCAGTGACAGATCTGTACTGCACCCCTCACAGCAGTAG  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  GTCAGACCTCGTCCTGCCCGGCACGGCCGGGGACTTCAGCCTGAGCGCCAGCCTGTCGGCCTGTACGCTGCTCT  148
                         .|||    |.|.|||||    ||||                   ||..|.||...|||   
Sbjct    1  -------------ATGC----CGCTGCCGG----TTCA-------------------GGTGTTTAACTTGC---  31

Query  149  ACGAGGGGGCCGTGGAGCCCATGCAGATCGACGTGGACCCCCAGGAAGACCCGCAGAATGCACCTGACGTCAAC  222
               |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   32  ---AGGGGGCCGTGGAGCCCATGCAGATCGACGTGGACCCCCAGGAAGACCCGCAGAATGCACCTGACGTCAAC  102

Query  223  TACGTGGTGGAGAACCCCAGCCTGGATCTGGAACAGTACGCGGCCAGCTACAGCGGCCTGATGCGCATCGAACG  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  103  TACGTGGTGGAGAACCCCAGCCTGGATCTGGAACAGTACGCGGCCAGCTACAGCGGCCTGATGCGCATCGAACG  176

Query  297  GCTGCAGTTCATTGCTGATCACTGCCCCACGCTGCGGGTGGAGGCCCTGAAGATGGCCCTCTCCTTCGTGCAGA  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  177  GCTGCAGTTCATTGCTGATCACTGCCCCACGCTGCGGGTGGAGGCCCTGAAGATGGCCCTCTCCTTCGTGCAGA  250

Query  371  GAACCTTTAACGTGGACATGTACGAGGAGATCCACCGCAAGCTCTCAGAGGCCACCAGGGAGCTGCAGAACGCA  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  251  GAACCTTTAACGTGGACATGTACGAGGAGATCCACCGCAAGCTCTCAGAGGCCACCAGGGAGCTGCAGAACGCA  324

Query  445  CCCGACGCCATCCCTGAGAGCGGCGTGGAGCCCCCAGCCCTGGACACGGCCTGGGTGGAGGCCACGCGGAAGAA  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  325  CCCGACGCCATCCCTGAGAGCGGCGTGGAGCCCCCAGCCCTGGACACGGCCTGGGTGGAGGCCACGCGGAAGAA  398

Query  519  GGCGCTGCTGAAGCTGGAGAAGCTGGACACAGACCTGAAGAACTACAAGGGCAACTCCATCAAAGAGAGCATCC  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  399  GGCGCTGCTGAAGCTGGAGAAGCTGGACACAGACCTGAAGAACTACAAGGGCAACTCCATCAAAGAGAGCATCC  472

Query  593  GGCGCGGCCACGACGACCTGGGCGACCACTACCTGGACTGTGGGGACCTCAGCAACGCCCTCAAGTGCTATTCC  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  473  GGCGCGGCCACGACGACCTGGGCGACCACTACCTGGACTGTGGGGACCTCAGCAACGCCCTCAAGTGCTATTCC  546

Query  667  CGGGCCCGGGACTACTGCACCAGCGCCAAACACGTCATCAACATGTGCCTCAATGTCATCAAGGTCAGCGTCTA  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  547  CGGGCCCGGGACTACTGCACCAGCGCCAAACACGTCATCAACATGTGCCTCAATGTCATCAAGGTCAGCGTCTA  620

Query  741  CTTGCAGAATTGGTCTCATGTGCTCAGCTACGTCAGCAAGGCTGAGTCCACCCCAGAGATTGCCGAGCAGCGAG  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  621  CTTGCAGAATTGGTCTCATGTGCTCAGCTACGTCAGCAAGGCTGAGTCCACCCCAGAGATTGCCGAGCAGCGAG  694

Query  815  GAGAGCGTGACAGCCAGACCCAGGCCATCCTCACCAAGCTCAAGTGTGCCGCAGGCTTGGCAGAGCTGGCCGCC  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  695  GAGAGCGTGACAGCCAGACCCAGGCCATCCTCACCAAGCTCAAGTGTGCCGCAGGCTTGGCAGAGCTGGCCGCC  768

Query  889  AGGAAGTACAAGCAGGCTGCCAAGTGCCTCCTGCTGGCTTCCTTTGATCACTGTGACTTCCCTGAGCTGCTGTC  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  769  AGGAAGTACAAGCAGGCTGCCAAGTGCCTCCTGCTGGCTTCCTTTGATCACTGTGACTTCCCTGAGCTGCTGTC  842

Query  963  CCCCAGCAACGTGGCCATCTACGGTGGCCTGTGCGCCTTGGCTACCTTTGACCGGCAGGAGCTGCAGCGCAATG  1036
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  843  CCCCAGCAACGTGGCCATCTACGGTGGCCTGTGCGCCTTGGCTACCTTTGACCGGCAGGAGCTGCAGCGCAATG  916

Query 1037  TCATCTCCAGCAGCTCCTTCAAGTTGTTCTTGGAGCTGGAGCCACAGGTCCGAGACATCATCTTCAAATTCTAC  1110
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  917  TCATCTCCAGCAGCTCCTTCAAGTTGTTCTTGGAGCTGGAGCCACAGGTCCGAGACATCATCTTCAAATTCTAC  990

Query 1111  GAGTCCAAGTACGCCTCATGTCTCAAGATGCTGGACGAGATGA-------------------------------  1153
            |||||||||||||||||||||||||||||||||||||||||||                               
Sbjct  991  GAGTCCAAGTACGCCTCATGTCTCAAGATGCTGGACGAGATGAAGGTGGGCCCCGCCTGGGGTAGGGGTGAGGT  1064

Query 1154  -----------------------------------------------AGGACAACCTGCTCCTGGACATGTATC  1180
                                                           |||||||||||||||||||||||||||
Sbjct 1065  GGGGCCCTGCCTGGCCTCCTGTCCTGGTCCTGACCAGCCCCTTCCCCAGGACAACCTGCTCCTGGACATGTATC  1138

Query 1181  TGGCCCCCCATGTCAGGACCCTGTACACCCAGATTCGCAACCGTGCCCTCATCCAGTATTTCAGCCCCTACGTG  1254
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1139  TGGCCCCCCATGTCAGGACCCTGTACACCCAGATTCGCAACCGTGCCCTCATCCAGTATTTCAGCCCCTACGTG  1212

Query 1255  TCAGCCGACATGCATAGGATGGCGGCAGCCTTCAATACCACGGTGGCCGCCCTGGAGGACGAGCTGACGCAGCT  1328
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1213  TCAGCCGACATGCATAGGATGGCGGCAGCCTTCAATACCACGGTGGCCGCCCTGGAGGACGAGCTGACGCAGCT  1286

Query 1329  AATCCTGGAGGGGCTGATCAGTGCCCGTGTGGACTCACACAGCAAGATCCTATACGCCCGGGACGTGGATCAGC  1402
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1287  AATCCTGGAGGGGCTGATCAGTGCCCGTGTGGACTCACACAGCAAGATCCTATACGCCCGGGACGTGGATCAGC  1360

Query 1403  GCAGCACCACCTTTGAGAAGTCTCTGTTGATGGGCAAGGAGTTCCAGCGCCGCGCCAAGGCCATGATGCTGCGG  1476
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1361  GCAGCACCACCTTTGAGAAGTCTCTGTTGATGGGCAAGGAGTTCCAGCGCCGCGCCAAGGCCATGATGCTGCGG  1434

Query 1477  GCAGCTGTGCTCCGCAACCAGATCCATGTCAAGTCCCCGCCCAGAGAAGGGAGCCAGGGGGAGCTGACTCCAGC  1550
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1435  GCAGCTGTGCTCCGCAACCAGATCCATGTCAAGTCCCCGCCCAGAGAAGGGAGCCAGGGGGAGCTGACTCCAGC  1508

Query 1551  CAACAGCCAGTCCCGGATGAGCACCAACATG  1581
            |||||||||||||||||||||||||||||||
Sbjct 1509  CAACAGCCAGTCCCGGATGAGCACCAACATG  1539

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