Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_00808
Subject:
XM_017318067.1
Aligned Length:
1336
Identities:
667
Gaps:
596

Alignment

Query    1  ATGATGGACGTTAACAGCAGCGGCCGCCCGGACCTCTACGGGCACCTCCGCTCTTTCCTTCTGCCAGAAGTGGG  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  GCGCGGGCTGCCCGACTTGAGCCCCGACGGTGGCGCCGACCCGGTCGCGGGCTCCTGGGCGCCGCACCTGCTGA  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  GCGAGGTGACAGCCAGCCCGGCGCCCACCTGGGACGCGCCCCCGGACAATGCCTCCGGCTGTGGGGAACAGATC  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  AACTACGGCAGAGTCGAGAAAGTTGTGATCGGCTCCATCCTGACGCTCATCACGCTGCTGACGATCGCGGGCAA  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  CTGCCTGGTGGTGATCTCCGTGTGCTTCGTCAAGAAGCTCCGCCAGCCCTCCAACTACCTGATCGTGTCCCTGG  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  CGCTGGCCGACCTCTCGGTGGCTGTGGCGGTCATGCCCTTCGTCAGCGTCACCGACCTCATCGGGGGCAAGTGG  444
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  445  ATCTTTGGACACTTTTTCTGTAATGTCTTCATCGCCATGGACGTCATGTGCTGCACGGCCTCGATCATGACCCT  518
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  519  GTGCGTGATCAGCATTGACAGGTACCTTGGGATCACAAGGCCCCTCACATACCCTGTGAGGCAGAATGGGAAAT  592
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  593  GCATGGCGAAGATGATTCTCTCCGTCTGGCTTCTCTCCGCCTCCATCACCTTACCTCCACTCTTTGGATGGGCT  666
              |||||.||.||||||||.||.||||||||||||||.||||||||||||||||||||.|||||.|||||||||
Sbjct    1  --ATGGCCAAAATGATTCTGTCGGTCTGGCTTCTCTCTGCCTCCATCACCTTACCTCCTCTCTTCGGATGGGCT  72

Query  667  CAGAATGTAAATGATGATAAGGTGTGCTTGATCAGCCAGGACTTTGGCTATACGATTTACTCTACCGCAGTGGC  740
            ||||||||.||.|||||.||.||||||||||||||||||||.||||||||.|||||.|||||.|||||||||||
Sbjct   73  CAGAATGTGAACGATGACAAAGTGTGCTTGATCAGCCAGGATTTTGGCTACACGATCTACTCCACCGCAGTGGC  146

Query  741  ATTTTATATCCCCATGTCCGTCATGCTTTTCATGTACTACCAGATTTACAAGGCTGCCAGGAAGAGTGCTGCCA  814
            .|||||||||||||||||.||||||||.|||||||||||.||||||||||||||.|||||||||||.||.||||
Sbjct  147  GTTTTATATCCCCATGTCGGTCATGCTGTTCATGTACTATCAGATTTACAAGGCCGCCAGGAAGAGCGCAGCCA  220

Query  815  AACACAAGTTTCCTGGCTTCCCTCGAGTGGAGCCAGACAGCGTCATCGCCCTGAATGGCATAGTGAAGCTCCAG  888
            ||||||||||..|.||||||||.||.|||.||||.||.|||||||||.|||||||||||.|.|||||.||||||
Sbjct  221  AACACAAGTTCTCAGGCTTCCCACGCGTGCAGCCGGAGAGCGTCATCTCCCTGAATGGCGTGGTGAAACTCCAG  294

Query  889  AAGGAGGTGGAAGAGTGTGCAAACCTTTCGAGACTCCTCAAGCATGAAAGGAAAAACATCTCCATCTTTAAGCG  962
            ||||||||||||||||||||.||||||||||||||.|||||.||.||||||||||||||.||||||||.|||.|
Sbjct  295  AAGGAGGTGGAAGAGTGTGCGAACCTTTCGAGACTGCTCAAACACGAAAGGAAAAACATTTCCATCTTCAAGAG  368

Query  963  AGAACAGAAAGCAGCCACCACCCTGGGGATCATCGTCGGGGCCTTTACCGTGTGCTGGCTGCCATTTTTCCTCC  1036
            .|||||||||||||||||.|||.|||||||||||||.||.|||||.||.||||||||||||||.|||||||||.
Sbjct  369  GGAACAGAAAGCAGCCACTACCTTGGGGATCATCGTGGGAGCCTTCACGGTGTGCTGGCTGCCGTTTTTCCTCT  442

Query 1037  TCTCGACAGCCAGACCCTTCATCTGTGGCACTTCCTGCAGCTGCATCCCACTGTGGGTGGAGAGGACATTTCTG  1110
            |.||.|||||.||.|||||.|||||||||||.|||||.|||||||||||.|||||||||||||||||||.||||
Sbjct  443  TGTCCACAGCAAGGCCCTTTATCTGTGGCACCTCCTGTAGCTGCATCCCGCTGTGGGTGGAGAGGACATGTCTG  516

Query 1111  TGGCTAGGCTATGCAAACTCTCTCATTAACCCTTTTATATATGCCTTCTTCAACCGGGACCTGAGGACCACCTA  1184
            |||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  517  TGGCTGGGCTATGCAAACTCTCTCATTAACCCTTTTATATATGCCTTCTTCAACCGGGACCTGAGGACCACCTA  590

Query 1185  TCGCAGCCTGCTCCAGTGCCAGTACCGGAATATCAACCGGAAGCTCTCAGCTGCAGGCATGCATGAAGCCCTGA  1258
            |||.|||||.||||||||||||||||||||||||||||||||||||||.||||||||||||||.||||||||||
Sbjct  591  TCGTAGCCTACTCCAGTGCCAGTACCGGAATATCAACCGGAAGCTCTCTGCTGCAGGCATGCACGAAGCCCTGA  664

Query 1259  AGCTTGCTGAGAGGCCAGAGAGACCTGAGTTTGTGCTACAAAA-TGCTGACTACTGTAGAAAAAAAGGTCATGA  1331
            |.||||||||||||||.||||||...||||||||||||||||| || ||||.|||||.|.||||||||||||||
Sbjct  665  AACTTGCTGAGAGGCCTGAGAGAAGCGAGTTTGTGCTACAAAACTG-TGACCACTGTGGGAAAAAAGGTCATGA  737

Query 1332  TTCA  1335
            |.||
Sbjct  738  TACA  741