Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_00841
- Subject:
- XM_005273493.4
- Aligned Length:
- 2447
- Identities:
- 890
- Gaps:
- 1534
Alignment
Query 1 ATGAGCTGGTCACCTTCCCTGACAACGCAGACATGTGGGGCCTGGGAAATGAAAGAGCGCCTTGGGACAGGGGG 74
||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 --------------------------------ATGTGGGGCCTGGGAAATGAAAGAGCGCCTTGGGACAGGGGG 42
Query 75 ATTTGGAAATGTCATCCGATGGCACAATCAGGAAACAGGTGAGCAGATTGCCATCAAGCAGTGCCGGCAGGAGC 148
||||||||||||||||||||||||||||||
Sbjct 43 ATTTGGAAATGTCATCCGATGGCACAATCA-------------------------------------------- 72
Query 149 TCAGCCCCCGGAACCGAGAGCGGTGGTGCCTGGAGATCCAGATCATGAGAAGGCTGACCCACCCCAATGTGGTG 222
Sbjct 73 -------------------------------------------------------------------------- 72
Query 223 GCTGCCCGAGATGTCCCTGAGGGGATGCAGAACTTGGCGCCCAATGACCTGCCCCTGCTGGCCATGGAGTACTG 296
Sbjct 73 -------------------------------------------------------------------------- 72
Query 297 CCAAGGAGGAGATCTCCGGAAGTACCTGAACCAGTTTGAGAACTGCTGTGGTCTGCGGGAAGGTGCCATCCTCA 370
Sbjct 73 -------------------------------------------------------------------------- 72
Query 371 CCTTGCTGAGTGACATTGCCTCTGCGCTTAGATACCTTCATGAAAACAGAATCATCCATCGGGATCTAAAGCCA 444
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 73 -----------------GCCTCTGCGCTTAGATACCTTCATGAAAACAGAATCATCCATCGGGATCTAAAGCCA 129
Query 445 GAAAACATCGTCCTGCAGCAAGGAGAACAGAGGTTAATACACAAAATTATTGACCTAGGATATGCCAAGGAGCT 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 130 GAAAACATCGTCCTGCAGCAAGGAGAACAGAGGTTAATACACAAAATTATTGACCTAGGATATGCCAAGGAGCT 203
Query 519 GGATCAGGGCAGTCTTTGCACATCATTCGTGGGGACCCTGCAGTACCTGGCCCCAGAGCTACTGGAGCAGCAGA 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 204 GGATCAGGGCAGTCTTTGCACATCATTCGTGGGGACCCTGCAGTACCTGGCCCCAGAGCTACTGGAGCAGCAGA 277
Query 593 AGTACACAGTGACCGTCGACTACTGGAGCTTCGGCACCCTGGCCTTTGAGTGCATCACGGGCTTCCGGCCCTTC 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 278 AGTACACAGTGACCGTCGACTACTGGAGCTTCGGCACCCTGGCCTTTGAGTGCATCACGGGCTTCCGGCCCTTC 351
Query 667 CTCCCCAACTGGCAGCCCGTGCAGTGGCATTCAAAAGTGCGGCAGAAGAGTGAGGTGGACATTGTTGTTAGCGA 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 352 CTCCCCAACTGGCAGCCCGTGCAGTGGCATTCAAAAGTGCGGCAGAAGAGTGAGGTGGACATTGTTGTTAGCGA 425
Query 741 AGACTTGAATGGAACGGTGAAGTTTTCAAGCTCTTTACCCTACCCCAATAATCTTAACAGTGTCCTGGCTGAGC 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 426 AGACTTGAATGGAACGGTGAAGTTTTCAAGCTCTTTACCCTACCCCAATAATCTTAACAGTGTCCTGGCTGAGC 499
Query 815 GACTGGAGAAGTGGCTGCAACTGATGCTGATGTGGCACCCCCGACAGAGGGGCACGGATCCCACGTATGGGCCC 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 500 GACTGGAGAAGTGGCTGCAACTGATGCTGATGTGGCACCCCCGACAGAGGGGCACGGATCCCACGTATGGGCCC 573
Query 889 AATGGCTGCTTCAAGGCCCTGGATGACATCTTAAACTTAAAGCTGGTTCATATCTTGAACATGGTCACGGGCAC 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 574 AATGGCTGCTTCAAGGCCCTGGATGACATCTTAAACTTAAAGCTGGTTCATATCTTGAACATGGTCACGGGCAC 647
Query 963 CATCCACACCTACCCTGTGACAGAGGATGAGAGTCTGCAGAGCTTGAAGGCCAGAATCCAACAGGACACGGGCA 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 648 CATCCACACCTACCCTGTGACAGAGGATGAGAGTCTGCAGAGCTTGAAGGCCAGAATCCAACAGGACACGGGCA 721
Query 1037 TCCCAGAGGAGGACCAGGAGCTGCTGCAGGAAGCGGGCCTGGCGTTGATCCCCGATAAGCCTGCCACTCAGTGT 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 722 TCCCAGAGGAGGACCAGGAGCTGCTGCAGGAAGCGGGCCTGGCGTTGATCCCCGATAAGCCTGCCACTCAGTGT 795
Query 1111 ATTTCAGACGGCAAG----GTGAGCCCTGGCTTCGTACACAC----------CATCCTGTTTACCTTGGCTGTG 1170
||||||||||||||| .|||| ||| ||||| .|||.||||| ||..||.||
Sbjct 796 ATTTCAGACGGCAAGTTAAATGAG----GGC------CACACATTGGACATGGATCTTGTTT---TTCTCTTTG 856
Query 1171 CCTCCTGGGAAACTCAAC----ACACTTTCAGATTT-----------CAATTCTGCTT-----TGTCA--TGTA 1222
.|..| .|.|||.|||.| |.|| ||||||.| ||| |.| ||||| ||||
Sbjct 857 ACAAC-AGTAAAATCACCTATGAGAC--TCAGATCTCCCCACGGCCCCAA-----CCTGAAAGTGTCAGCTGTA 922
Query 1223 GTCTGTTAATCACACAGTGC------GGATACCTGGCTGGTTTT------------------------------ 1260
..|| ||| ||.|| ||| |.||.|| .||.|
Sbjct 923 TCCT-----TCA---AGAGCCCAAGAGGA-ATCTCGC--CTTCTTCCAGCTGAGGAAGGTGTGGGGCCAGGTCT 985
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 986 GGCACAGCATCCAGACCCTGAAGGAAGATTGCAACCGGCTGCAGCAGGGACAGCGAGCCGCCATGATGAATCTC 1059
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 1060 CTCCGAAACAACAGCTGCCTCTCCAAAATGAAGAATTCCATGGCTTCCATGTCTCAGCAGCTCAAGGCCAAGTT 1133
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 1134 GGATTTCTTCAAAACCAGCATCCAGATTGACCTGGAGAAGTACAGCGAGCAAACCGAGTTTGGGATCACATCAG 1207
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 1208 ATAAACTGCTGCTGGCCTGGAGGGAAATGGAGCAGGCTGTGGAGCTCTGTGGGCGGGAGAACGAAGTGAAACTC 1281
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 1282 CTGGTAGAACGGATGATGGCTCTGCAGACCGACATTGTGGACTTACAGAGGAGCCCCATGGGCCGGAAGCAGGG 1355
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 1356 GGGAACGCTGGACGACCTAGAGGAGCAAGCAAGGGAGCTGTACAGGAGACTAAGGGAAAAACCTCGAGACCAGC 1429
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 1430 GAACTGAGGGTGACAGTCAGGAAATGGTACGGCTGCTGCTTCAGGCAATTCAGAGCTTCGAGAAGAAAGTGCGA 1503
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 1504 GTGATCTATACGCAGCTCAGTAAAACTGTGGTTTGCAAGCAGAAGGCGCTGGAACTGTTGCCCAAGGTGGAAGA 1577
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 1578 GGTGGTGAGCTTAATGAATGAGGATGAGAAGACTGTTGTCCGGCTGCAGGAGAAGCGGCAGAAGGAGCTCTGGA 1651
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 1652 ATCTCCTGAAGATTGCTTGTAGCAAGGTCCGTGGTCCTGTCAGTGGAAGCCCGGATAGCATGAATGCCTCTCGA 1725
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 1726 CTTAGCCAGCCTGGGCAGCTGATGTCTCAGCCCTCCACGGCCTCCAACAGCTTACCTGAGCCAGCCAAGAAGAG 1799
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 1800 TGAAGAACTGGTGGCTGAAGCACATAACCTCTGCACCCTGCTAGAAAATGCCATACAGGACACTGTGAGGGAAC 1873
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 1874 AAGACCAGAGTTTCACGGTAACAGCTTGTGTGAGACTCCTGCGATTCCATGTCCTTTCTTTCTATGGCAAAATA 1947
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 1948 GAAGAGAAAATGGAAATGCAATCTGGCATTATCCTCAACCTCAGTGTTTGTTTGTTTGCTTGTTTATTTGTGAC 2021
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 2022 AGGGTCTCTCTCTCTCACCCAGGCTGGAGTGCAGTGGCATGATCTTGGCTCACTGCAACCTCCGCTTCCCGGGT 2095
Query 1261 ----- 1260
Sbjct 2096 TCAAG 2100
