Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_00841
- Subject:
- XM_011544520.2
- Aligned Length:
- 2475
- Identities:
- 922
- Gaps:
- 1530
Alignment
Query 1 ----------------------------ATGAGCTGGTCACCTTCCCTGACAACGCAGACATGTGGGGCCTGGG 46
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGCTCAGAAAGTTAGCACGACATCAGTATGAGCTGGTCACCTTCCCTGACAACGCAGACATGTGGGGCCTGGG 74
Query 47 AAATGAAAGAGCGCCTTGGGACAGGGGGATTTGGAAATGTCATCCGATGGCACAATCAGGAAACAGGTGAGCAG 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 AAATGAAAGAGCGCCTTGGGACAGGGGGATTTGGAAATGTCATCCGATGGCACAATCA---------------- 132
Query 121 ATTGCCATCAAGCAGTGCCGGCAGGAGCTCAGCCCCCGGAACCGAGAGCGGTGGTGCCTGGAGATCCAGATCAT 194
Sbjct 133 -------------------------------------------------------------------------- 132
Query 195 GAGAAGGCTGACCCACCCCAATGTGGTGGCTGCCCGAGATGTCCCTGAGGGGATGCAGAACTTGGCGCCCAATG 268
Sbjct 133 -------------------------------------------------------------------------- 132
Query 269 ACCTGCCCCTGCTGGCCATGGAGTACTGCCAAGGAGGAGATCTCCGGAAGTACCTGAACCAGTTTGAGAACTGC 342
Sbjct 133 -------------------------------------------------------------------------- 132
Query 343 TGTGGTCTGCGGGAAGGTGCCATCCTCACCTTGCTGAGTGACATTGCCTCTGCGCTTAGATACCTTCATGAAAA 416
|||||||||||||||||||||||||||||
Sbjct 133 ---------------------------------------------GCCTCTGCGCTTAGATACCTTCATGAAAA 161
Query 417 CAGAATCATCCATCGGGATCTAAAGCCAGAAAACATCGTCCTGCAGCAAGGAGAACAGAGGTTAATACACAAAA 490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 162 CAGAATCATCCATCGGGATCTAAAGCCAGAAAACATCGTCCTGCAGCAAGGAGAACAGAGGTTAATACACAAAA 235
Query 491 TTATTGACCTAGGATATGCCAAGGAGCTGGATCAGGGCAGTCTTTGCACATCATTCGTGGGGACCCTGCAGTAC 564
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 236 TTATTGACCTAGGATATGCCAAGGAGCTGGATCAGGGCAGTCTTTGCACATCATTCGTGGGGACCCTGCAGTAC 309
Query 565 CTGGCCCCAGAGCTACTGGAGCAGCAGAAGTACACAGTGACCGTCGACTACTGGAGCTTCGGCACCCTGGCCTT 638
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 310 CTGGCCCCAGAGCTACTGGAGCAGCAGAAGTACACAGTGACCGTCGACTACTGGAGCTTCGGCACCCTGGCCTT 383
Query 639 TGAGTGCATCACGGGCTTCCGGCCCTTCCTCCCCAACTGGCAGCCCGTGCAGTGGCATTCAAAAGTGCGGCAGA 712
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 384 TGAGTGCATCACGGGCTTCCGGCCCTTCCTCCCCAACTGGCAGCCCGTGCAGTGGCATTCAAAAGTGCGGCAGA 457
Query 713 AGAGTGAGGTGGACATTGTTGTTAGCGAAGACTTGAATGGAACGGTGAAGTTTTCAAGCTCTTTACCCTACCCC 786
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 458 AGAGTGAGGTGGACATTGTTGTTAGCGAAGACTTGAATGGAACGGTGAAGTTTTCAAGCTCTTTACCCTACCCC 531
Query 787 AATAATCTTAACAGTGTCCTGGCTGAGCGACTGGAGAAGTGGCTGCAACTGATGCTGATGTGGCACCCCCGACA 860
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 532 AATAATCTTAACAGTGTCCTGGCTGAGCGACTGGAGAAGTGGCTGCAACTGATGCTGATGTGGCACCCCCGACA 605
Query 861 GAGGGGCACGGATCCCACGTATGGGCCCAATGGCTGCTTCAAGGCCCTGGATGACATCTTAAACTTAAAGCTGG 934
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 606 GAGGGGCACGGATCCCACGTATGGGCCCAATGGCTGCTTCAAGGCCCTGGATGACATCTTAAACTTAAAGCTGG 679
Query 935 TTCATATCTTGAACATGGTCACGGGCACCATCCACACCTACCCTGTGACAGAGGATGAGAGTCTGCAGAGCTTG 1008
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 680 TTCATATCTTGAACATGGTCACGGGCACCATCCACACCTACCCTGTGACAGAGGATGAGAGTCTGCAGAGCTTG 753
Query 1009 AAGGCCAGAATCCAACAGGACACGGGCATCCCAGAGGAGGACCAGGAGCTGCTGCAGGAAGCGGGCCTGGCGTT 1082
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 754 AAGGCCAGAATCCAACAGGACACGGGCATCCCAGAGGAGGACCAGGAGCTGCTGCAGGAAGCGGGCCTGGCGTT 827
Query 1083 GATCCCCGATAAGCCTGCCACTCAGTGTATTTCAGACGGCAAG----GTGAGCCCTGGCTTCGTACACAC---- 1148
||||||||||||||||||||||||||||||||||||||||||| .|||| ||| |||||
Sbjct 828 GATCCCCGATAAGCCTGCCACTCAGTGTATTTCAGACGGCAAGTTAAATGAG----GGC------CACACATTG 891
Query 1149 ------CATCCTGTTTACCTTGGCTGTGCCTCCTGGGAAACTCAAC----ACACTTTCAGATTT---------- 1202
.|||.||||| ||..||.||.|..| .|.|||.|||.| |.|| ||||||.|
Sbjct 892 GACATGGATCTTGTTT---TTCTCTTTGACAAC-AGTAAAATCACCTATGAGAC--TCAGATCTCCCCACGGCC 959
Query 1203 -CAATTCTGCTT-----TGTCA--TGTAGTCTGTTAATCACACAGTGC------GGATACCTGGCTGGTTTT-- 1260
||| |.| ||||| ||||..|| ||| ||.|| ||| |.||.|| .||.|
Sbjct 960 CCAA-----CCTGAAAGTGTCAGCTGTATCCT-----TCA---AGAGCCCAAGAGGA-ATCTCGC--CTTCTTC 1017
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 1018 CAGCTGAGGAAGGTGTGGGGCCAGGTCTGGCACAGCATCCAGACCCTGAAGGAAGATTGCAACCGGCTGCAGCA 1091
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 1092 GGGACAGCGAGCCGCCATGATGAATCTCCTCCGAAACAACAGCTGCCTCTCCAAAATGAAGAATTCCATGGCTT 1165
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 1166 CCATGTCTCAGCAGCTCAAGGCCAAGTTGGATTTCTTCAAAACCAGCATCCAGATTGACCTGGAGAAGTACAGC 1239
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 1240 GAGCAAACCGAGTTTGGGATCACATCAGATAAACTGCTGCTGGCCTGGAGGGAAATGGAGCAGGCTGTGGAGCT 1313
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 1314 CTGTGGGCGGGAGAACGAAGTGAAACTCCTGGTAGAACGGATGATGGCTCTGCAGACCGACATTGTGGACTTAC 1387
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 1388 AGAGGAGCCCCATGGGCCGGAAGCAGGGGGGAACGCTGGACGACCTAGAGGAGCAAGCAAGGGAGCTGTACAGG 1461
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 1462 AGACTAAGGGAAAAACCTCGAGACCAGCGAACTGAGGGTGACAGTCAGGAAATGGTACGGCTGCTGCTTCAGGC 1535
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 1536 AATTCAGAGCTTCGAGAAGAAAGTGCGAGTGATCTATACGCAGCTCAGTAAAACTGTGGTTTGCAAGCAGAAGG 1609
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 1610 CGCTGGAACTGTTGCCCAAGGTGGAAGAGGTGGTGAGCTTAATGAATGAGGATGAGAAGACTGTTGTCCGGCTG 1683
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 1684 CAGGAGAAGCGGCAGAAGGAGCTCTGGAATCTCCTGAAGATTGCTTGTAGCAAGGTCCGTGGTCCTGTCAGTGG 1757
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 1758 AAGCCCGGATAGCATGAATGCCTCTCGACTTAGCCAGCCTGGGCAGCTGATGTCTCAGCCCTCCACGGCCTCCA 1831
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 1832 ACAGCTTACCTGAGCCAGCCAAGAAGAGTGAAGAACTGGTGGCTGAAGCACATAACCTCTGCACCCTGCTAGAA 1905
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 1906 AATGCCATACAGGACACTGTGAGGGAACAAGACCAGAGTTTCACGGTAACAGCTTGTGTGAGACTCCTGCGATT 1979
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 1980 CCATGTCCTTTCTTTCTATGGCAAAATAGAAGAGAAAATGGAAATGCAATCTGGCATTATCCTCAACCTCAGTG 2053
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 2054 TTTGTTTGTTTGCTTGTTTATTTGTGACAGGGTCTCTCTCTCTCACCCAGGCTGGAGTGCAGTGGCATGATCTT 2127
Query 1261 --------------------------------- 1260
Sbjct 2128 GGCTCACTGCAACCTCCGCTTCCCGGGTTCAAG 2160
