Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_00911
- Subject:
- XR_001748697.2
- Aligned Length:
- 2921
- Identities:
- 527
- Gaps:
- 2392
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCCCTTTTTCATTCACTGAATAATTTCACTACTTTACAAATATGTGTCAGGCACTAGGCTAGCAGACACACACA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TAATATTTGTTAAATAACCATACCTTTCTAGAAGGAACTTCCCCTTTAAAGTTTTTCTATATACAAATTGAGAA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ACAGGTAGAAAGAATCCACATTCTTAGAACTTATTCTTAGCAGATAATTTAATTTGAATCTCAATGAAAATGAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ATTTAATAAATATGACTATTAAGAGACAATCAGAGTCATATTTTTAAAAAGTACATTCACTGACCTAATGAGTT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 ATGATGTGTGGAGAACATATCACAGAACCAGAAACATCCTGTCCAAAACAGCCTAGCATATTTTAGTTCAACAA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ACAAAATGATGTGTTGAAATTTAGTTGGTGAGATAAGACAAAGCCAGCCCATTTGGGTCTAAATTTATGAGATT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TTTTATCCAGAACATGATTATAATGATTATTTCACTTAGAGTTGTGTGAATCTGACCTAACCAAGGATAACAAT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GGGTAGGTCGAAGATCATATTTATGACATCTTGGCCCTGGATTTTTCCAGTTCGTTCAGACTTCAAAACCTTTG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AAGGGAGTCTTAGGTTCTTACCTTATTGTTATTAAGATGTTCGAAAAGCTCAAGAATTCTAAAAAGCCAGAATG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AGGGGATAACTTTCACCAAAGACTTTTCCTTTATCTTTTGTTGTACGTGGTCACTTAACTGTTTTAGCTTAATT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TAACAAAAAAGATGAGAAAATATTTTTACAGTATCATGAGATGAGGCTTCTAATGGGCTGGTGGCCAAGGATGG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GGAAAAGAATCAAGGACAGATTAAATCTCCAAAGTAAGAGAATCTATTATATAGCAAACAAACTTGTATAATTA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ATCTCTAGGAGCACGGGTTCTAATAAGCCCAGGTACCACAAAGATAGAGAATTGCTTCTTCTGTCCAGGCAAAA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GGCATGACTAAAGGTGTGACTTGCTCTCTGGGGATGATACCAATTTGGCAGCAGCATTTCCTTCCTTCCTTCTT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TCCATCCTTCCTTCCTTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCTTCCTTC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CTTCCTTCCTTCCCTCCTTCCCTCCCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCTCTCTCTTTCTTTCTTCTTTTCTCTTTCTCTCTGTCTTT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TGTTTGTTCGTTCATTTTTGAGACAGAGTCTCACTCTGTTGCCCAGGCTGGAGTGCAGTGGCATGATCTCAGTT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CACTGTAACCTCCACTTCCCGGGTTCAGGCGATTCTCCTGCCTCAGCCTCCTAAGTAGCTGGGATTACAGGTGC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CCGCCATCATGCCCAGCTAATTTTTGTATTTTTACTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGACTTG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AACTCCTGACCTGAAGTGATCCGCCCGCCTCAGCCTTCCAAAGTGTTGGGATTACAGACGTGAGCCACTTTTTC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TCTTTCTTAAAACATTTTGCCCAATGCTAAATTTTACTGCTTGGTTTCACCATAGTAATCTGCTCTAGAAGAAA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 ATTACCACAGGTGGGATTGTCAAGGTGTTCCGGGATAATCATTTCTACTTTCTTTCTTTTTTTTTTTGGAGACA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GGTTCTTACTTTGTCACCCAGGCTGGAGTGCAGTGGCGTGATCTCAGCTCAATGCAGCCTCAACCTCCCAGGCT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CAAGCTACCTTCTTACCTCAGCCCCCCAAGTCGCTGGGACCACAGCTTCAACTCACTCCCCAATCAAGGTGAGT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GTGTATCTCCCATGAGTGAGTAAACTACCACGTGCCCATCACCCAGCTTCAACAAGCATCGACTCACTCTCCAA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TCAAGGTGAAATATCAGACATCATGTGATTTTATCGATTCTTTAATCTCCAGCTCAGCTTCAACAATTCAACGC 1998
Query 1 --------------------------------------------------------------ATGGCAGTGTTT 12
||||||||||||
Sbjct 1999 TGTTCTTTCTGAAAAAGTACACATCGTGCCTTCTCTACTTCGCTCTTGGAACATAATTTCTCATGGCAGTGTTT 2072
Query 13 AAGACCACTCTGTGGAGGTTAATTTCTGGGACCTTAGGGATAATATGCCTTTCGTTGATGGCTACGTTGGGAAT 86
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||
Sbjct 2073 AAGACCACTCTGTGGAGGTTAATTTCTGGGACCTTAGGGATAATATGCCTTTCGTTGATGTCTACGTTGGGAAT 2146
Query 87 TTTGTTGAAAAATTCTTTTACTAAACTGAGTATTGAGCCAGCATTTACTCCAGGACCCAACATAGAACTCCAGA 160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 TTTGTTGAAAAATTCTTTTACTAAACTGAGTATTGAGCCAGCATTTACTCCAGGACCCAACATAGAACTCCAGA 2220
Query 161 AAGACTCTGACTGCTGTTCTTGCCAAGAAAAATGGGTTGGGTACCGGTGCAACTGTTACTTCATTTCCAGTGAA 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 AAGACTCTGACTGCTGTTCTTGCCAAGAAAAATGGGTTGGGTACCGGTGCAACTGTTACTTCATTTCCAGTGAA 2294
Query 235 CAGAAAACTTGGAACGAAAGTCGGCATCTCTGTGCTTCTCAGAAATCCAGCCTGCTTCAGCTTCAAAACACAGA 308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 CAGAAAACTTGGAACGAAAGTCGGCATCTCTGTGCTTCTCAGAAATCCAGCCTGCTTCAGCTTCAAAACACAGA 2368
Query 309 TGAACT---GGATTTTATGAGCTCCAGTCAACAATTTTACTGGATTGGACTCTCTTACAGTGAGGAGCACACCG 379
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369 TGAACTGCAGGATTTTATGAGCTCCAGTCAACAATTTTACTGGATTGGACTCTCTTACAGTGAGGAGCACACCG 2442
Query 380 CCTGGTTGTGGGAGAATGGCTCTGCACTCTCCCAGTATCTATTTCCATCATTTGAAACTTTTAATACAAAGAAC 453
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443 CCTGGTTGTGGGAGAATGGCTCTGCACTCTCCCAGTATCTATTTCCATCATTTGAAACTTTTAATACAAAGAAC 2516
Query 454 TGCATAGCGTATAATCCAAATGGAAATGCTTTAGATGAATCCTGTGAAGATAAAAATCGTTATATCTGTAAGCA 527
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2517 TGCATAGCGTATAATCCAAATGGAAATGCTTTAGATGAATCCTGTGAAGATAAAAATCGTTATATCT------- 2583
Query 528 AC-AGCTCATT--------------------------------------------------------------- 537
|| ||.|| ||
Sbjct 2584 ACAAGGTC-TTGCTATGTTGCCCAGGCTGGTCTTGAACTCCTGGCCTCAAGGGATTCTCCCACCTTGGATTCCC 2656
Query 538 -------------------------------------------------------------------------- 537
Sbjct 2657 AAAGTGCTGGGATTATAGGTGTGAACCACCATCCCTGGCCCTCTTCACATTCTTGTATGAAGATTGATTTGGGA 2730
Query 538 -------------------------------------------------------------------------- 537
Sbjct 2731 AAAATGCATTTCAGAATGATCCATGTGCACTTGAGAAGAATGTATACTCTGCTGCTGTTGGATGGAATGTTCTG 2804
Query 538 -------------------------------------------------------------------------- 537
Sbjct 2805 CACATGTCTGTAGGTGACTTGACTTGCAGTGTTGATCAGGTCATCTGGGTCTTTGTTGCCTTTATGTTTGGTTG 2878
Query 538 ----------------------------------- 537
Sbjct 2879 TTCTATCCATTATTAAAAGTGAGCACTGAAATCTC 2913
