Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_00914
- Subject:
- NM_001366309.2
- Aligned Length:
- 1677
- Identities:
- 920
- Gaps:
- 756
Alignment
Query 1 ---------------------------------------------------------ATG---GATGCCATGGC 14
|.| |||||||||||
Sbjct 1 ATGGGGCGACAGCGGTCGCGGGGGCGTGGCAGCCGGACCTTTCCCTTGCGGACGCGAAGGCGTGATGCCATGGC 74
Query 15 TAGTCCAGGGAAAGATAACTATAGAATGAAAAGTTATAAGAATAAAGCCCTAAATCCTCAAGAGATGCGTAGAC 88
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 TAGTCCAGGGAAAGATAACTATAGAATGAAAAGTTATAAGAATAAAGCCCTAAATCCTCAAGAGATGCGTAGAC 148
Query 89 GAAGAGAAGAAGAAGGAATACAGCTTAGAAAACAAAAAAGAGAAGAACAGTTGTTCAAACGCAGAAATGTCTAT 162
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GAAGAGAAGAAGAAGGAATACAGCTTAGAAAACAAAAAAGAGAAGAACAGTTGTTCAAACGCAGAAATGTCTAT 222
Query 163 TTGCCCAGAAATGATGAATCTATGCTTGAAAGTCCTATACAGGATCCAGATATTAGTTCCACTGTACCCATTCC 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 TTGCCCAGAAATGATGAATCTATGCTTGAAAGTCCTATACAGGATCCAGATATTAGTTCCACTGTACCCATTCC 296
Query 237 AGAGGAAGAAGTTGTTACTACAGATATGGTTCAGATGATTTTTTCTAATAATGCTGATCAACAGCTAACAGCAA 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 AGAGGAAGAAGTTGTTACTACAGATATGGTTCAGATGATTTTTTCTAATAATGCTGATCAACAGCTAACAGCAA 370
Query 311 CACAGAAATTTAGAAAGCTGCTTTCTAAAGAACCTAATCCACCAATAGATCAAGTTATACAGAAACCAGGAGTT 384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CACAGAAATTTAGAAAGCTGCTTTCTAAAGAACCTAATCCACCAATAGATCAAGTTATACAGAAACCAGGAGTT 444
Query 385 GTACAGAGATTTGTGAAATTTCTTGAAAGAAATGAAAATTGCACTTTACAATTTGAAGCTGCATGGGCATTAAC 458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GTACAGAGATTTGTGAAATTTCTTGAAAGAAATGAAAATTGCACTTTACAATTTGAAGCTGCATGGGCATTAAC 518
Query 459 AAATATAGCATCTGGAACTTTTCTGCATACCAAGGTAGTGATTGAAACTGGGGCTGTTCCGATTTTTATCAAAC 532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 AAATATAGCATCTGGAACTTTTCTGCATACCAAGGTAGTGATTGAAACTGGGGCTGTTCCGATTTTTATCAAAC 592
Query 533 TTCTTAATTCTGAACATGAAGATGTTCAGGAACAGGCTGTTTGGGCACTTGGTAATATTGCTGGTGACAATGCA 606
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TTCTTAATTCTGAACATGAAGATGTTCAGGAACAGGCTGTTTGGGCACTTGGTAATATTGCTGGTGACAATGCA 666
Query 607 GAATGCAGAGATTTTGTTTTGAATTGTGAAATACTTCCACCTCTTTTAGAGTTATTAACAAATTCAAACAGACT 680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GAATGCAGAGATTTTGTTTTGAATTGTGAAATACTTCCACCTCTTTTAGAGTTATTAACAAATTCAAACAGACT 740
Query 681 CACAACAACAAGAAATGCCGTGTGGGCCCTCTCAAATTTATGTAGAGGCAAAAACCCTCCTCCAAACTTTAGTA 754
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CACAACAACAAGAAATGCCGTGTGGGCCCTCTCAAATTTATGTAGAGGCAAAAACCCTCCTCCAAACTTTAGTA 814
Query 755 AGGTTTCACCTTGCTTAAATGTCCTGTCACGACTGTTGTTTAGCAGTGACCCAGATGTGTTAGCAGACGTGTGT 828
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 AGGTTTCACCTTGCTTAAATGTCCTGTCACGACTGTTGTTTAGCAGTGACCCAGATGTGTTAGCAGACGTGTGT 888
Query 829 TGGGCCCTTTCTTATCTCTCCGATGGACCCAATGATAAAATTCAAGCAGTCATTGATTCTGGAGTCTGTCGAAG 902
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 TGGGCCCTTTCTTATCTCTCCGATGGACCCAATGATAAAATTCAAGCAGTCATTGATTCTGGAGTCTGTCGAAG 962
Query 903 ATTGGTGGAACTTTTGATGCACAATGATTATAAAGTTGTATCACCTGCATTAAGGGCAGTTGGTAATATTGTGA 976
|||||||||||||||||||
Sbjct 963 ATTGGTGGAACTTTTGATG------------------------------------------------------- 981
Query 977 CTGGTGATGATATTCAAACACAGGTAATTTTGAATTGTTCTGCATTACCCTGTCTCTTACATTTATTGAGTAGC 1050
Sbjct 982 -------------------------------------------------------------------------- 981
Query 1051 CCAAAGGAGTCAATTAGAAAAGAAGCCTGCTGGACTGTTTCTAACATCACTGCTGGAAATAGAGCTCAGATTCA 1124
Sbjct 982 -------------------------------------------------------------------------- 981
Query 1125 GGCTGTTATAGATGCAAATATTTTTCCTGTTTTGATTGAGATTCTTCAGAAAGCAGAGTTTCGTACCAGAAAAG 1198
Sbjct 982 -------------------------------------------------------------------------- 981
Query 1199 AAGCAGCTTGGGCTATAACTAATGCAACATCAGGAGGTACTCCAGAGCAAATAAGGTATTTGGTAGCTTTAGGC 1272
Sbjct 982 -------------------------------------------------------------------------- 981
Query 1273 TGCATTAAACCACTTTGTGATCTTTTGACTGTTATGGACTCCAAAATAGTCCAAGTGGCTTTAAATGGACTTGA 1346
Sbjct 982 -------------------------------------------------------------------------- 981
Query 1347 AAATATTTTACGTCTTGGAGAACAAGAATCTAAGCAGAATGGAATAGGCATTAATCCATACTGTGCTCTCATTG 1420
Sbjct 982 -------------------------------------------------------------------------- 981
Query 1421 AAGAAGCATATGGTCTGGATAAAATTGAGTTTTTGCAAAGCCATGAAAATCAGGAAATTTACCAGAAGGCATTT 1494
Sbjct 982 -------------------------------------------------------------------------- 981
Query 1495 GATCTGATTGAACATTACTTTGGTGTAGAAGAAGATGACCCCAGCATTGTACCTCAGGTGGATGAAAACCAACA 1568
Sbjct 982 -------------------------------------------------------------------------- 981
Query 1569 ACAGTTTATATTTCAGCAGCAGGAAGCACCAATGGATGGATTTCAACTT 1617
Sbjct 982 ------------------------------------------------- 981
