Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_00958
• Subject: NM_011839.4
• Aligned Length: 1082
• Identities: 852
• Gaps: 10

Alignment

Query    1  ATGATTGCGGCCCAGGCCAAGCTGGTCTACCATCTGAATAAATACTACAACGAAAAATGCCAAGCCAGGAAAGC  74
            |||||.||.||.||||||||||||||.|||||.||.|||||||||||||.|||....|||||.||..|.||.||
Sbjct    1  ATGATCGCCGCTCAGGCCAAGCTGGTTTACCAGCTCAATAAATACTACACCGAGCGCTGCCAGGCGCGCAAGGC  74

Query   75  TGCCATTGCCAAAACTATCCGGGAAGTCTGCAAAGTAGTTTCCGACGTACTGAAGGAAGTGGAAGTGCAGGAGC  148
            |||.||.|||||.||.|||||.|||||||||||.|||||.||.||.||.||.|||||||||||.|||||.||||
Sbjct   75  TGCGATCGCCAAGACCATCCGAGAAGTCTGCAAGGTAGTGTCGGATGTGCTAAAGGAAGTGGAGGTGCAAGAGC  148

Query  149  CGCGGTTCATCAGCTCTCTCAACGAGATGGACAATCGCTACGAGGGCCTCGAGGTCATCTCCCCCACCGAATTT  222
            |.||.||||||||||||||.|..|||||.|||...|||||||||||.||.|||||.|||||.||||||||.||.
Sbjct  149  CCCGCTTCATCAGCTCTCTGAGTGAGATTGACGCCCGCTACGAGGGGCTGGAGGTAATCTCGCCCACCGAGTTC  222

Query  223  GAAGTGGTGCTTTATCTCAACCAAATGGGGGTGTTCAACTTCGTGGACGATGGCTCACTGCCCGGCTGCGCGGT  296
            ||.|||||.||.||.||||||||.|||||.||.|||||||||||||||||.||.||.|||||||||||.||.||
Sbjct  223  GAGGTGGTACTCTACCTCAACCAGATGGGAGTCTTCAACTTCGTGGACGACGGATCTCTGCCCGGCTGTGCCGT  296

Query  297  GCTGAAGTTGAGCGACGGGCGCAAGAGGAGCATGTCCCTCTGGGTGGAATTCATTACCGCCTCCGGCTACCTCT  370
            |||.||..|.|||||.|||||.|||.||||||||||.||.|||||.||.|||||.||.||.||.||||||||.|
Sbjct  297  GCTCAAACTAAGCGATGGGCGGAAGCGGAGCATGTCTCTTTGGGTCGAGTTCATCACAGCGTCTGGCTACCTTT  370

Query  371  CGGCGCGCAAAATCCGGTCCAGGTTTCAGACGCTGGTGGCTCAAGCGGTAGACAAATGTAGCTACCGGGATGTG  444
            |.||||||||.|||||.||..|.||.|||||.||.||.||.||.|||||.|||||.||.|||||||||||.|||
Sbjct  371  CTGCGCGCAAGATCCGCTCGCGTTTCCAGACACTAGTAGCCCAGGCGGTGGACAAGTGCAGCTACCGGGACGTG  444

Query  445  GTAAAGATGGTGGCAGACACCAGCGAAGTGAAACTGAGAATCCGAGATAGGTACGTGGTGCAGATCACGCCGGC  518
            ||.||||||.|.||.|||||.||.||.||.||..||.|.|||.|.||..|.|||||||||||.|||||.||.||
Sbjct  445  GTCAAGATGATCGCCGACACTAGTGAGGTCAAGTTGCGCATCAGGGAGCGCTACGTGGTGCAAATCACCCCAGC  518

Query  519  CTTTAAATGCACCGGGATCTGGCCGAGGAGTGCTGCCCACTGGCCACTTCCCCACATCCCCTGGCCGGGACCCA  592
            .||.||.|||||||||||||||||..|.||.||.||.||.|||||..|.|||||||||||||||||.||.||||
Sbjct  519  GTTCAAGTGCACCGGGATCTGGCCTCGCAGCGCGGCACAGTGGCCTATGCCCCACATCCCCTGGCCCGGCCCCA  592

Query  593  ACCGGGTGGCGGAGGTCAAGGCGGAAGGTTTCAATCTCTTG---TCCAAGGAGTGCCACTCCTTGGCCGGCAAG  663
            |.||||||||||||||||||||.|||||.|||||   ||||   ||||||||||||.||||..||.|.||||||
Sbjct  593  ATCGGGTGGCGGAGGTCAAGGCCGAAGGGTTCAA---CTTGCTCTCCAAGGAGTGCTACTCGCTGACTGGCAAG  663

Query  664  CAGAGCTCGGCGGAGAGCGACGCCTGGGTGCTGCAGTTCGCGGAGGCAGAGAACAGACTGCAGATGGGGGGCTG  737
            ||||||||.||.||.|||||||||||||||||||||||||..|||||.||||||.|..|||.||||||.|||||
Sbjct  664  CAGAGCTCCGCAGAAAGCGACGCCTGGGTGCTGCAGTTCGGTGAGGCGGAGAACCGCTTGCTGATGGGCGGCTG  737

Query  738  CAGAAAGAAGTGCCTCTCCATCCTCAAAACCTTAAGGGATCGTCACCTTGAACTGCCGGGCCAGCCCTTGAACA  811
            .|||||.|||||||||||..|.||.||.||..|..||||.||.|||||.||.|||||.||||||||..|.||.|
Sbjct  738  TAGAAACAAGTGCCTCTCGGTGCTGAAGACGCTGCGGGACCGCCACCTGGAGCTGCCTGGCCAGCCGCTCAATA  811

Query  812  ATTACCATATGAAGACTCTGGTTTCCTACGAGTGTGAAAAGCATCCCCGA--GAGTCGGACTGGGACGAGTCTT  883
            |.|||||.||||||||.|||.|....||||||||.||.||.||  |||||  ||..||||||||||||||.|||
Sbjct  812  ACTACCACATGAAGACGCTGCTGCTGTACGAGTGCGAGAAACA--CCCGAGGGAAACGGACTGGGACGAGGCTT  883

Query  884  GCCTGGGTGATCGGCTGAACGGGATTTTGCTGCAACTTATCTCCTGCCTGCAGTGCCGGCGGTGTCCCCACTAC  957
            ||.||||.||.||.||||||||.||..||||.||.||.||||||||||||||||||||.||.||.||.||||||
Sbjct  884  GCTTGGGCGACCGTCTGAACGGCATCCTGCTACAGCTCATCTCCTGCCTGCAGTGCCGCCGCTGCCCTCACTAC  957

Query  958  TTTCTACCGAACTTAGATCTGTTTCAAGGCAAACCTCACTCAGCTCTGGAAAACGCTGCCAAACAAACGTGGCG  1031
            |||.|.||.|||.|.||.||.||.||.||.||.||.|||||.||.|||||.|.|||||||||.||.||.|||.|
Sbjct  958  TTTTTGCCCAACCTCGACCTCTTCCAGGGTAAGCCCCACTCGGCCCTGGAGAGCGCTGCCAAGCAGACCTGGAG  1031

Query 1032  ACTGGCAAGAGAGATCCTGACCAACCCGAAAAGTTTGGAAAAACTT  1077
            |.||||.||.||.|||||.|||||.||.|||||.|||||.|||||.
Sbjct 1032  ATTGGCCAGGGAAATCCTCACCAATCCCAAAAGCTTGGACAAACTA  1077