Construct: ORF ccsbBroadEn_00958

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF011290.1_s300c1, BRDN0000396518
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
MAB21L1 (4081)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 4081 MAB21L1 mab-21 like 1 NM_005584.5 100% 100%
2 human 10586 MAB21L2 mab-21 like 2 NM_006439.5 79.6% 94.1% (many diffs)
3 mouse 17116 Mab21l1 mab-21-like 1 (C. elegans) NM_010750.3 90.2% 100% (many diffs)
4 mouse 23937 Mab21l2 mab-21-like 2 NM_011839.4 78.7% 93.8% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1143
ORF length:
1077
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGAT TGCGGCCCAG GCCAAGCTGG TCTACCATCT GAATAAATAC TACAACGAAA
121AATGCCAAGC CAGGAAAGCT GCCATTGCCA AAACTATCCG GGAAGTCTGC AAAGTAGTTT
181CCGACGTACT GAAGGAAGTG GAAGTGCAGG AGCCGCGGTT CATCAGCTCT CTCAACGAGA
241TGGACAATCG CTACGAGGGC CTCGAGGTCA TCTCCCCCAC CGAATTTGAA GTGGTGCTTT
301ATCTCAACCA AATGGGGGTG TTCAACTTCG TGGACGATGG CTCACTGCCC GGCTGCGCGG
361TGCTGAAGTT GAGCGACGGG CGCAAGAGGA GCATGTCCCT CTGGGTGGAA TTCATTACCG
421CCTCCGGCTA CCTCTCGGCG CGCAAAATCC GGTCCAGGTT TCAGACGCTG GTGGCTCAAG
481CGGTAGACAA ATGTAGCTAC CGGGATGTGG TAAAGATGGT GGCAGACACC AGCGAAGTGA
541AACTGAGAAT CCGAGATAGG TACGTGGTGC AGATCACGCC GGCCTTTAAA TGCACCGGGA
601TCTGGCCGAG GAGTGCTGCC CACTGGCCAC TTCCCCACAT CCCCTGGCCG GGACCCAACC
661GGGTGGCGGA GGTCAAGGCG GAAGGTTTCA ATCTCTTGTC CAAGGAGTGC CACTCCTTGG
721CCGGCAAGCA GAGCTCGGCG GAGAGCGACG CCTGGGTGCT GCAGTTCGCG GAGGCAGAGA
781ACAGACTGCA GATGGGGGGC TGCAGAAAGA AGTGCCTCTC CATCCTCAAA ACCTTAAGGG
841ATCGTCACCT TGAACTGCCG GGCCAGCCCT TGAACAATTA CCATATGAAG ACTCTGGTTT
901CCTACGAGTG TGAAAAGCAT CCCCGAGAGT CGGACTGGGA CGAGTCTTGC CTGGGTGATC
961GGCTGAACGG GATTTTGCTG CAACTTATCT CCTGCCTGCA GTGCCGGCGG TGTCCCCACT
1021ACTTTCTACC GAACTTAGAT CTGTTTCAAG GCAAACCTCA CTCAGCTCTG GAAAACGCTG
1081CCAAACAAAC GTGGCGACTG GCAAGAGAGA TCCTGACCAA CCCGAAAAGT TTGGAAAAAC
1141TTTACCCAAC TTTCTTGTAC AAAGTtggca ttataagaaa gcattgctta tcaatttgtt
1201gcaacgaac

Download FASTA (ORF) (Full)