Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_01248
- Subject:
- NM_001304965.1
- Aligned Length:
- 1729
- Identities:
- 795
- Gaps:
- 827
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGATCCCGGAGCTGGATCGGACTCATCTCTGACTGTCAATGAGCAGGTCATTGTGATGTCAGGCCACGAGAC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CATCCGAGTATTGGAGGTGGGAGTGGATGCCCAGCTTCCAGCCGAGGAGGAGAGCAAAGGACTGGAGAGTGTGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CAGCTGGTGGCTCCCAGAGTGGAGGCCCTGTTGAAGCCAGTGGACCTGCTGAAGCTGGGTCATGTGACCCCGAC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CATTCTGCAGAGGCAACTGTCGCTGCCCGGAGTCCCTCCGAGTCCTGCCCCAGCGATTGCCACCTTCAACCAAG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCCCGAGCCAGCCTCAGGCATCACAGACCCTGACGCCGCTGGCTGTACAAGCTGCCCCCCAGGTCAAGTGGCTG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GGCAGCAGGGGCTGGCCGTGTGGACAATCCCTACAGCAACTGTGGCTGCCCTCCCAGGACTGACCGCGGCCTCT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CCCACGGGGGGAACTTTCAAGCCACCTTTAGCTGGTCTCCAAGCAGCTGCCGTGCTGAACACCGCTCTCCCGAC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ACCTGTACAAGCTGCCCCACCAATCCAGGCCTCCTCGCCCGCCCAGCCCCGGCCACCAGCTCAGCCCCAGCCAC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TGTTCCAGACCCAGCCGCTGCTACAGACCACGCCTGCCATCCTCCCACAACCCACCGCTGCCACCGTTGCTGCC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CCCACACCCAAGACAGTGGACGCCACCCCGCAGATCACTGTCCAGCCTGCAGGCTTCGCATTTAGCCCAGGGAT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CATCAGTGCAGCCTCCCTCGGGGGACAGACGCAGATCCTGGGCTCCCTCACTACAGCTCCAGTTATTACCAACA 814
Query 1 -----------ATGCCAGGGATCAGCAGTCAGATCCTCACCAATGCTCAGGGACAGGTTATTGGAACCCTTCCA 63
|||||.|||||||||||||||||||||||.||||||||||||||||||||||||.|.|||||.
Sbjct 815 CCATTCCCAGCATGCCCGGGATCAGCAGTCAGATCCTCACGAATGCTCAGGGACAGGTTATTGGAGCACTTCCG 888
Query 64 TGGGTAGTGAACTCAGCTAGTGTGGCGGCCCCAGCACCAGCCCAAAGCCTGCAGGTCCAGGCCGTGACCCCCCA 137
||||||||||||||||||||.|||||..|.||||||||.||.||.||||||||||||||.||||||||.|||||
Sbjct 889 TGGGTAGTGAACTCAGCTAGCGTGGCCACACCAGCACCGGCACAGAGCCTGCAGGTCCAAGCCGTGACTCCCCA 962
Query 138 GCTGTTGTTGAACGCCCAGGGCCAGGTGATTGCGACCCTGGCTAGCAGCCCCCTGCCTCCACCTGTGGCTGTCC 211
|||.||||||||.|||||||||||||||||.||.|||||.||.||||||||||||||||..||||||||||||.
Sbjct 963 GCTCTTGTTGAATGCCCAGGGCCAGGTGATCGCAACCCTAGCCAGCAGCCCCCTGCCTCAGCCTGTGGCTGTCA 1036
Query 212 GGAAGCCAAGCACACCTGAGTCCCCTGCTAAGAGTGAGGTGCAGCCCATCCAGCCCACACCAACCGTGCCCCAG 285
|||||||||.||||||.|||||||||||||||||||||||||||||.||||||||.||||.|.|||||||||||
Sbjct 1037 GGAAGCCAAACACACCGGAGTCCCCTGCTAAGAGTGAGGTGCAGCCTATCCAGCCGACACAAGCCGTGCCCCAG 1110
Query 286 CCTGCTGTGGTCATTGCCAGCCCAGCTCCAGCCGC-CAAGCCATCTGCCTCTGCTCCTATCCCAATTACCTGCT 358
|||||.||..||.|..||||||||.|.|||| ||| ||||||.||.||..|..||||.||||||||.|||||||
Sbjct 1111 CCTGCAGTAATCCTCACCAGCCCAACGCCAG-CGCTCAAGCCGTCAGCTGCAACTCCCATCCCAATCACCTGCT 1183
Query 359 CAGAGACCCCCACCGTCAGCCAGTTGGTGTCCAAGCCACATACTCCAAGTCTGGATGAGGATGGGATCAACTTA 432
||||||||||.||||||||.||||||||.||.|||||.||.||.|||||||||||||||||.||||||||||||
Sbjct 1184 CAGAGACCCCAACCGTCAGTCAGTTGGTATCAAAGCCGCACACCCCAAGTCTGGATGAGGACGGGATCAACTTA 1257
Query 433 GAAGAGATCCGGGAGTTTGCCAAGAACTTTAAGATCCGGCGGCTCTCGCTGGGCCTTACACAGACCCAGGTGGG 506
||||||||||||||||||||.|||||.||||||||||||||||||||.|||||.||.|||||||||||||||||
Sbjct 1258 GAAGAGATCCGGGAGTTTGCTAAGAATTTTAAGATCCGGCGGCTCTCCCTGGGTCTGACACAGACCCAGGTGGG 1331
Query 507 TCAGGCTCTGACTGCAACGGAAGGTCCAGCCTACAGCCAGTCAGCCATCTGCCGGTTCGAGAAGCTAGACATCA 580
.||||||.||||.||.||.|||||.||.|||||||||||.||||||||||||.||||.|||||..|.|||||||
Sbjct 1332 CCAGGCTTTGACGGCGACAGAAGGGCCGGCCTACAGCCAATCAGCCATCTGCAGGTTTGAGAAATTGGACATCA 1405
Query 581 CACCCAAGAGTGCCCAGAAGCTAAAGCCGGTGCTGGAAAAGTGGCTAAACGAAGCTGAACTGCGGAACCAGGAA 654
||||||||||.|||||||||||.||||||||..|||||||||||.|.|..||.||.||.||.||.|||||||||
Sbjct 1406 CACCCAAGAGCGCCCAGAAGCTGAAGCCGGTTTTGGAAAAGTGGTTGATGGAGGCAGAGCTCCGCAACCAGGAA 1479
Query 655 GGCCAGCAGAACCTGATGGAGTTTGTGGGAGGCGAGCCCTCCAAGAAACGCAAACGCCGCACCTCCTTCACCCC 728
|||||||||||||||||||||||.|||||.|||||||||||||||||||||||.||.|||||.||||||||.||
Sbjct 1480 GGCCAGCAGAACCTGATGGAGTTCGTGGGCGGCGAGCCCTCCAAGAAACGCAAGCGGCGCACTTCCTTCACACC 1553
Query 729 CCAGGCCATAGAGGCTCTCAATGCCTATTTTGAGAAGAACCCACTGCCCACAGGCCAGGAGATCACTGAAATTG 802
.||||||||||||||||||||||||||.||||||||.|||||.||||||||.||||||||||||||.||.||.|
Sbjct 1554 GCAGGCCATAGAGGCTCTCAATGCCTACTTTGAGAAAAACCCCCTGCCCACCGGCCAGGAGATCACGGAGATCG 1627
Query 803 CTAAGGAGCTCAACTACGACCGTGAGGTAGTGCGGGTCTGGTTCTGCAATCGGCGCCAGACGCTCAAGAACACC 876
|.||||||||||||||||||||.|||||.|||.|||||||||||||.|||||.||||||||.||.|||||||||
Sbjct 1628 CCAAGGAGCTCAACTACGACCGGGAGGTGGTGAGGGTCTGGTTCTGTAATCGACGCCAGACACTGAAGAACACC 1701
Query 877 AGCAAGCTGAACGTCTTTCAGATCCCT 903
||||||||||||||||||||||||||.
Sbjct 1702 AGCAAGCTGAACGTCTTTCAGATCCCG 1728
