Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_01257
- Subject:
- XM_011509673.2
- Aligned Length:
- 1736
- Identities:
- 1108
- Gaps:
- 604
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGAGCCGCCTCCCCGTGGACTGGCCTTAAGTGTCCCTATCTATTCTCCCTACGACCAAAGCTCCTGCGGCCT 74
Query 1 ----------------------------------------ATGGGCCGGACCGTGGTCGTGCTGGGCGGAGGCA 34
||||||||||||||||||||||||||||||||||
Sbjct 75 TCCCTCTAGGGTTGTCACCCTAGCTGGACCTGGTTTCCGCATGGGCCGGACCGTGGTCGTGCTGGGCGGAGGCA 148
Query 35 TCAGCGGCTTGGCCGCCAGTTACCACCTGAGCCGGGCCCCCTGCCCCCCTAAGGTGGTCCTAGTGGAGAGCAGT 108
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TCAGCGGCTTGGCCGCCAGTTACCACCTGAGCCGGGCCCCCTGCCCCCCTAAGGTGGTCCTAGTGGAGAGCAGT 222
Query 109 GAGCGTCTGGGAGGCTGGATTCGCTCCGTTCGAGGCCCTAATGGTGCTATCTTTGAGCTTGGACCTCGGGGAAT 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GAGCGTCTGGGAGGCTGGATTCGCTCCGTTCGAGGCCCTAATGGTGCTATCTTTGAGCTTGGACCTCGGGGAAT 296
Query 183 TAGGCCAGCGGGAGCCCTAGGGGCCCGGACCTTGCTCCTGGTTTCTGAGCTTGGCTTGGATTCAGAAGTGCTGC 256
|||||||||||||||||||||||||||||||||||||||
Sbjct 297 TAGGCCAGCGGGAGCCCTAGGGGCCCGGACCTTGCTCCT----------------------------------- 335
Query 257 CTGTCCGGGGAGACCACCCAGCTGCCCAGAACAGGTTCCTCTACGTGGGCGGTGCCCTGCATGCCCTACCCACT 330
Sbjct 336 -------------------------------------------------------------------------- 335
Query 331 GGCCTCAGGGGGCTACTCCGCCCTTCACCCCCCTTCTCCAAACCTCTGTTTTGGGCTGGGCTGAGGGAGCTGAC 404
Sbjct 336 -------------------------------------------------------------------------- 335
Query 405 CAAGCCCCGGGGCAAAGAGCCTGATGAGACTGTGCACAGTTTTGCCCAGCGCCGCCTTGGACCTGAGGTGGCGT 478
||||||||
Sbjct 336 ------------------------------------------------------------------GGTGGCGT 343
Query 479 CTCTAGCCATGGACAGTCTCTGCCGTGGAGTGTTTGCAGGCAACAGCCGTGAGCTCAGCATCAGGTCCTGCTTT 552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 344 CTCTAGCCATGGACAGTCTCTGCCGTGGAGTGTTTGCAGGCAACAGCCGTGAGCTCAGCATCAGGTCCTGCTTT 417
Query 553 CCCAGTCTCTTCCAAGCTGAGCAAACCCATCGTTCCATATTACTGGGCCTGCTGCTGGGGGCAGGGCGGACCCC 626
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 418 CCCAGTCTCTTCCAAGCTGAGCAAACCCATCGTTCCATATTACTGGGCCTGCTGCTGGGGGCAGGGCGGACCCC 491
Query 627 ACAGCCAGACTCAGCACTCATTCGCCAGGCCTTGGCTGAGCGCTGGAGCCAGTGGTCACTTCGTGGAGGTCTAG 700
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 492 ACAGCCAGACTCAGCACTCATTCGCCAGGCCTTGGCTGAGCGCTGGAGCCAGTGGTCACTTCGTGGAGGTCTAG 565
Query 701 AGATGTTGCCTCAGGCCCTTGAAACCCACCTGACTAGTAGGGGGGTCAGTGTTCTCAGAGGCCAGCCGGTCTGT 774
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 566 AGATGTTGCCTCAGGCCCTTGAAACCCACCTGACTAGTAGGGGGGTCAGTGTTCTCAGAGGCCAGCCGGTCTGT 639
Query 775 GGGCTCAGCCTCCAGGCAGAAGGGCGCTGGAAGGTATCTCTAAGGGACAGCAGTCTGGAGGCTGACCACGTTAT 848
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 640 GGGCTCAGCCTCCAGGCAGAAGGGCGCTGGAAGGTATCTCTAAGGGACAGCAGTCTGGAGGCTGACCACGTTAT 713
Query 849 TAGTGCCATTCCAGCTTCAGTGCTCAGTGAGCTGCTCCCTGCTGAGGCTGCCCCTCTGGCTCGTGCCCTGAGTG 922
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 714 TAGTGCCATTCCAGCTTCAGTGCTCAGTGAGCTGCTCCCTGCTGAGGCTGCCCCTCTGGCTCGTGCCCTGAGTG 787
Query 923 CCATCACTGCAGTGTCTGTAGCTGTGGTGAATCTGCAGTACCAAGGAGCCCATCTGCCTGTCCAGGGATTTGGA 996
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 788 CCATCACTGCAGTGTCTGTAGCTGTGGTGAATCTGCAGTACCAAGGAGCCCATCTGCCTGTCCAGGGATTTGGA 861
Query 997 CATTTGGTGCCATCTTCAGAAGATCCAGGAGTCCTGGGAATCGTGTATGACTCAGTTGCTTTCCCTGAGCAGGA 1070
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 862 CATTTGGTGCCATCTTCAGAAGATCCAGGAGTCCTGGGAATCGTGTATGACTCAGTTGCTTTCCCTGAGCAGGA 935
Query 1071 CGGGAGCCCCCCTGGCCTCAGAGTGACTGTGATGCTGGGAGGTTCCTGGTTACAGACACTGGAGGCTAGTGGCT 1144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 936 CGGGAGCCCCCCTGGCCTCAGAGTGACTGTGATGCTGGGAGGTTCCTGGTTACAGACACTGGAGGCTAGTGGCT 1009
Query 1145 GTGTCTTATCTCAGGAGCTGTTTCAACAGCGGGCCCAGGAAGCAGCTGCTACACAATTAGGACTGAAGGAGATG 1218
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1010 GTGTCTTATCTCAGGAGCTGTTTCAACAGCGGGCCCAGGAAGCAGCTGCTACACAATTAGGACTGAAGGAGATG 1083
Query 1219 CCGAGCCACTGCTTGGTCCATCTACACAAGAACTGCATTCC-----CCAGT----------ATACACT------ 1271
||||||||||||||||||||||||||||||| || ||||| |.|.|.|
Sbjct 1084 CCGAGCCACTGCTTGGTCCATCTACACAAGA--------CCAAGAACCAGTTGAAGTGGCGACAGAGTCATGAC 1149
Query 1272 AGGTC-----ACTGGCAAAAACTA--GAGT---CAG------CTAGGCAA----------------TTCCTG-- 1311
|||.| |.|||| ||| |||| ||| .||||.|| |||.||
Sbjct 1150 AGGACCGTGGAGTGGC-----CTAAGGAGTACCCAGGGCGAAGTAGGAAACAGGCTCCTTCTATTCTTCATGTG 1218
Query 1312 -----------ACTGCTCA----CAGGTTGCCCCTGAC--TCTGGCTGGAGCCTCCTATGAGGGAGTTGCTGTT 1368
|||.|||| |||| |.||.|||| .||||..|..||||||
Sbjct 1219 CCTGGGTGCCAACTCCTCAGGTGCAGG--GACCGTGACCACCTGGGGGCTGCCTCC------------------ 1272
Query 1369 AATGACTGTATAGAGAGTGGGCG-----CCAG-GCAGCA------GTCAGTGT-----CCTG--GGCACAG--A 1421
|.||.|.|| |||| ||| || ||| |.| |||| |.|||.| |
Sbjct 1273 --------------GTGTCGACGCATTCCCAGCGCA-CATACCTGGTC--TTTTGCTGCCTGTCGTCACCGCCA 1329
Query 1422 ACCTAACAGC---------------------------------------------------------------- 1431
.||.||||||
Sbjct 1330 CCCCAACAGCCGGGCAGGCATCGCTGCCGCCATCTTGGAAGCGGGCGCTGCGGGGGCGGGGTCTCGCGTCATGG 1403
Query 1432 ---------------------------------- 1431
Sbjct 1404 GGCGGGGCCTCGGGGCGGAGCCACCCGGGCTGAC 1437
