Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_01257
- Subject:
- XM_011509674.2
- Aligned Length:
- 1751
- Identities:
- 1066
- Gaps:
- 661
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGAGCCGCCTCCCCGTGGACTGGCCTTAAGTGTCCCTATCTATTCTCCCTACGACCAAAGCTCCTGCGGCCT 74
Query 1 ----------------------------------------ATGGGCCGGACCGTGGTCGTGCTGGGCGGAGGCA 34
||||||||||||||||||||||||||||||||||
Sbjct 75 TCCCTCTAGGGTTGTCACCCTAGCTGGACCTGGTTTCCGCATGGGCCGGACCGTGGTCGTGCTGGGCGGAGGCA 148
Query 35 TCAGCGGCTTGGCCGCCAGTTACCACCTGAGCCGGGCCCCCTGCCCCCCTAAGGTGGTCCTAGTGGAGAGCAGT 108
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TCAGCGGCTTGGCCGCCAGTTACCACCTGAGCCGGGCCCCCTGCCCCCCTAAGGTGGTCCTAGTGGAGAGCAGT 222
Query 109 GAGCGTCTGGGAGGCTGGATTCGCTCCGTTCGAGGCCCTAATGGTGCTATCTTTGAGCTTGGACCTCGGGGAAT 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GAGCGTCTGGGAGGCTGGATTCGCTCCGTTCGAGGCCCTAATGGTGCTATCTTTGAGCTTGGACCTCGGGGAAT 296
Query 183 TAGGCCAGCGGGAGCCCTAGGGGCCCGGACCTTGCTCCT---------------GGTTTCTGAGCTTGGCTTGG 241
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 297 TAGGCCAGCGGGAGCCCTAGGGGCCCGGACCTTGCTCCTGGCATGTGGAGAGCAGGTTTCTGAGCTTGGCTTGG 370
Query 242 ATTCAGAAGTGCTGCCTGTCCGGGGAGACCACCCAGCTGCCCAGAACAGGTTCCTCTACGTGGGCGGTGCCCTG 315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 ATTCAGAAGTGCTGCCTGTCCGGGGAGACCACCCAGCTGCCCAGAACAGGTTCCTCTACGTGGGCGGTGCCCTG 444
Query 316 CATGCCCTACCCACTGGCCTCAGGGGGCTACTCCGCCCTTCACCCCCCTTCTCCAAACCTCTGTTTTGGGCTGG 389
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CATGCCCTACCCACTGGCCTCAGGGGGCTACTCCGCCCTTCACCCCCCTTCTCCAAACCTCTGTTTTGGGCTGG 518
Query 390 GCTGAGGGAGCTGACCAAGCCCCGGGGCAAAGAGCCTGATGAGACTGTGCACAGTTTTGCCCAGCGCCGCCTTG 463
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GCTGAGGGAGCTGACCAAGCCCCGGGGCAAAGAGCCTGATGAGACTGTGCACAGTTTTGCCCAGCGCCGCCTTG 592
Query 464 GACCTGAGGTGGCGTCTCTAGCCATGGACAGTCTCTGCCGTGGAGTGTTTGCAGGCAACAGCCGTGAGCTCAGC 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GACCTGAGGTGGCGTCTCTAGCCATGGACAGTCTCTGCCGTGGAGTGTTTGCAGGCAACAGCCGTGAGCTCAGC 666
Query 538 ATCAGGTCCTGCTTTCCCAGTCTCTTCCAAGCTGAGCAAACCCATCGTTCCATATTACTGGGCCTGCTGCTGGG 611
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 ATCAGGTCCTGCTTTCCCAGTCTCTTCCAAGCTGAGCAAACCCATCGTTCCATATTACTGGGCCTGCTGCTGGG 740
Query 612 GGCAGGGCGGACCCCACAGCCAGACTCAGCACTCATTCGCCAGGCCTTGGCTGAGCGCTGGAGCCAGTGGTCAC 685
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GGCAGGGCGGACCCCACAGCCAGACTCAGCACTCATTCGCCAGGCCTTGGCTGAGCGCTGGAGCCAGTGGTCAC 814
Query 686 TTCGTGGAGGTCTAGAGATGTTGCCTCAGGCCCTTGAAACCCACCTGACTAGTAGGGGGGTCAGTGTTCTCAGA 759
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TTCGTGGAGGTCTAGAGATGTTGCCTCAGGCCCTTGAAACCCACCTGACTAGTAGGGGGGTCAGTGTTCTCAGA 888
Query 760 GGCCAGCCGGTCTGTGGGCTCAGCCTCCAGGCAGAAGGGCGCTGGAAGGTATCTCTAAGGGACAGCAGTCTGGA 833
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 GGCCAGCCGGTCTGTGGGCTCAGCCTCCAGGCAGAAGGGCGCTGGAAG-------------------------- 936
Query 834 GGCTGACCACGTTATTAGTGCCATTCCAGCTTCAGTGCTCAGTGAGCTGCTCCCTGCTGAGGCTGCCCCTCTGG 907
Sbjct 937 -------------------------------------------------------------------------- 936
Query 908 CTCGTGCCCTGAGTGCCATCACTGCAGTGTCTGTAGCTGTGGTGAATCTGCAGTACCAAGGAGCCCATCTGCCT 981
Sbjct 937 -------------------------------------------------------------------------- 936
Query 982 GTCCAGGGATTTGGACATTTGGTGCCATCTTCAGAAGATCCAGGAGTCCTGGGAATCGTGTATGACTCAGTTGC 1055
Sbjct 937 -------------------------------------------------------------------------- 936
Query 1056 TTTCCCTGAGCAGGACGGGAGCCCCCCTGGCCTCAGAGTGACTGTGATGCTGGGAGGTTCCTGGTTACAGACAC 1129
|||||||||||||||||||||||||||||||
Sbjct 937 -------------------------------------------GTGATGCTGGGAGGTTCCTGGTTACAGACAC 967
Query 1130 TGGAGGCTAGTGGCTGTGTCTTATCTCAGGAGCTGTTTCAACAGCGGGCCCAGGAAGCAGCTGCTACACAATTA 1203
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 968 TGGAGGCTAGTGGCTGTGTCTTATCTCAGGAGCTGTTTCAACAGCGGGCCCAGGAAGCAGCTGCTACACAATTA 1041
Query 1204 GGACTGAAGGAGATGCCGAGCCACTGCTTGGTCCATCTACACAAGAACTGCATTCC-----CCAGT-------- 1264
|||||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct 1042 GGACTGAAGGAGATGCCGAGCCACTGCTTGGTCCATCTACACAAGA--------CCAAGAACCAGTTGAAGTGG 1107
Query 1265 --ATACACT------AGGTC-----ACTGGCAAAAACTA--GAGT---CAG------CTAGGCAA--------- 1305
|.|.|.| |||.| |.|||| ||| |||| ||| .||||.||
Sbjct 1108 CGACAGAGTCATGACAGGACCGTGGAGTGGC-----CTAAGGAGTACCCAGGGCGAAGTAGGAAACAGGCTCCT 1176
Query 1306 -------TTCCTG-------------ACTGCTCA----CAGGTTGCCCCTGAC--TCTGGCTGGAGCCTCCTAT 1353
|||.|| |||.|||| |||| |.||.|||| .||||..|..||||||
Sbjct 1177 TCTATTCTTCATGTGCCTGGGTGCCAACTCCTCAGGTGCAGG--GACCGTGACCACCTGGGGGCTGCCTCC--- 1245
Query 1354 GAGGGAGTTGCTGTTAATGACTGTATAGAGAGTGGGCG-----CCAG-GCAGCA------GTCAGTGT-----C 1410
|.||.|.|| |||| ||| || ||| |.| |
Sbjct 1246 -----------------------------GTGTCGACGCATTCCCAGCGCA-CATACCTGGTC--TTTTGCTGC 1287
Query 1411 CTG--GGCACAG--AACCTAACAGC------------------------------------------------- 1431
||| |.|||.| |.||.||||||
Sbjct 1288 CTGTCGTCACCGCCACCCCAACAGCCGGGCAGGCATCGCTGCCGCCATCTTGGAAGCGGGCGCTGCGGGGGCGG 1361
Query 1432 ------------------------------------------------- 1431
Sbjct 1362 GGTCTCGCGTCATGGGGCGGGGCCTCGGGGCGGAGCCACCCGGGCTGAC 1410
