Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_01257
- Subject:
- XM_017001562.1
- Aligned Length:
- 1641
- Identities:
- 930
- Gaps:
- 687
Alignment
Query 1 ATGGGCCGGACCGTGGTCGTGCTGGGCGGAGGCATCAGCGGCTTGGCCGCCAGTTACCACCTGAGCCGGGCCCC 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 CTGCCCCCCTAAGGTGGTCCTAGTGGAGAGCAGTGAGCGTCTGGGAGGCTGGATTCGCTCCGTTCGAGGCCCTA 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 ATGGTGCTATCTTTGAGCTTGGACCTCGGGGAATTAGGCCAGCGGGAGCCCTAGGGGCCCGGACCTTGCTCCTG 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 GTTTCTGAGCTTGGCTTGGATTCAGAAGTGCTGCCTGTCCGGGGAGACCACCCAGCTGCCCAGAACAGGTTCCT 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 CTACGTGGGCGGTGCCCTGCATGCCCTACCCACTGGCCTCAGGGGGCTACTCCGCCCTTCACCCCCCTTCTCCA 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 AACCTCTGTTTTGGGCTGGGCTGAGGGAGCTGACCAAGCCCCGGGGCAAAGAGCCTGATGAGACTGTGCACAGT 444
|||||||||||||||||
Sbjct 1 ---------------------------------------------------------ATGAGACTGTGCACAGT 17
Query 445 TTTGCCCAGCGCCGCCTTGGACCTG-------------------AGGTGGCGTCTCTAGCCATGGACAGTCTCT 499
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 18 TTTGCCCAGCGCCGCCTTGGACCTGAGTCCTAGTCTCACCCTTAAGGTGGCGTCTCTAGCCATGGACAGTCTCT 91
Query 500 GCCGTGGAGTGTTTGCAGGCAACAGCCGTGAGCTCAGCATCAGGTCCTGCTTTCCCAGTCTCTTCCAAGCTGAG 573
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 92 GCCGTGGAGTGTTTGCAGGCAACAGCCGTGAGCTCAGCATCAGGTCCTGCTTTCCCAGTCTCTTCCAAGCTGAG 165
Query 574 CAAACCCATCGTTCCATATTACTGGGCCTGCTGCTGGGGGCAGGGCGGACCCCACAGCCAGACTCAGCACTCAT 647
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 166 CAAACCCATCGTTCCATATTACTGGGCCTGCTGCTGGGGGCAGGGCGGACCCCACAGCCAGACTCAGCACTCAT 239
Query 648 TCGCCAGGCCTTGGCTGAGCGCTGGAGCCAGTGGTCACTTCGTGGAGGTCTAGAGATGTTGCCTCAGGCCCTTG 721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 240 TCGCCAGGCCTTGGCTGAGCGCTGGAGCCAGTGGTCACTTCGTGGAGGTCTAGAGATGTTGCCTCAGGCCCTTG 313
Query 722 AAACCCACCTGACTAGTAGGGGGGTCAGTGTTCTCAGAGGCCAGCCGGTCTGTGGGCTCAGCCTCCAGGCAGAA 795
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 314 AAACCCACCTGACTAGTAGGGGGGTCAGTGTTCTCAGAGGCCAGCCGGTCTGTGGGCTCAGCCTCCAGGCAGAA 387
Query 796 GGGCGCTGGAAGGTATCTCTAAGGGACAGCAGTCTGGAGGCTGACCACGTTATTAGTGCCATTCCAGCTTCAGT 869
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 388 GGGCGCTGGAAGGTATCTCTAAGGGACAGCAGTCTGGAGGCTGACCACGTTATTAGTGCCATTCCAGCTTCAGT 461
Query 870 GCTCAGTGAGCTGCTCCCTGCTGAGGCTGCCCCTCTGGCTCGTGCCCTGAGTGCCATCACTGCAGTGTCTGTAG 943
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 462 GCTCAGTGAGCTGCTCCCTGCTGAGGCTGCCCCTCTGGCTCGTGCCCTGAGTGCCATCACTGCAGTGTCTGTAG 535
Query 944 CTGTGGTGAATCTGCAGTACCAAGGAGCCCATCTGCCTGTCCAGGGATTTGGACATTTGGTGCCATCTTCAGAA 1017
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 536 CTGTGGTGAATCTGCAGTACCAAGGAGCCCATCTGCCTGTCCAGGGATTTGGACATTTGGTGCCATCTTCAGAA 609
Query 1018 GATCCAGGAGTCCTGGGAATCGTGTATGACTCAGTTGCTTTCCCTGAGCAGGACGGGAGCCCCCCTGGCCTCAG 1091
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 610 GATCCAGGAGTCCTGGGAATCGTGTATGACTCAGTTGCTTTCCCTGAGCAGGACGGGAGCCCCCCTGGCCTCAG 683
Query 1092 AGTGACTGTGATGCTGGGAGGTTCCTGGTTACAGACACTGGAGGCTAGTGGCTGTGTCTTATCTCAGGAGCTGT 1165
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 684 AGTGACTGTGATGCTGGGAGGTTCCTGGTTACAGACACTGGAGGCTAGTGGCTGTGTCTTATCTCAGGAGCTGT 757
Query 1166 TTCAACAGCGGGCCCAGGAAGCAGCTGCTACACAATTAGGACTGAAGGAGATGCCGAGCCACTGCTTGGTCCAT 1239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 758 TTCAACAGCGGGCCCAGGAAGCAGCTGCTACACAATTAGGACTGAAGGAGATGCCGAGCCACTGCTTGGTCCAT 831
Query 1240 CTACACAAGAACTGCATTCC-----CCAGT----------ATACACT------AGGTC-----ACTGGCAAAAA 1287
|||||||||| || ||||| |.|.|.| |||.| |.||||
Sbjct 832 CTACACAAGA--------CCAAGAACCAGTTGAAGTGGCGACAGAGTCATGACAGGACCGTGGAGTGGC----- 892
Query 1288 CTA--GAGT---CAG------CTAGGCAA----------------TTCCTG-------------ACTGCTCA-- 1319
||| |||| ||| .||||.|| |||.|| |||.||||
Sbjct 893 CTAAGGAGTACCCAGGGCGAAGTAGGAAACAGGCTCCTTCTATTCTTCATGTGCCTGGGTGCCAACTCCTCAGG 966
Query 1320 --CAGGTTGCCCCTGAC--TCTGGCTGGAGCCTCCTATGAGGGAGTTGCTGTTAATGACTGTATAGAGAGTGGG 1389
|||| |.||.|||| .||||..|..|||||| |.||.|.
Sbjct 967 TGCAGG--GACCGTGACCACCTGGGGGCTGCCTCC--------------------------------GTGTCGA 1006
Query 1390 CG-----CCAG-GCAGCA------GTCAGTGT-----CCTG--GGCACAG--AACCTAACAGC----------- 1431
|| |||| ||| || ||| |.| |||| |.|||.| |.||.||||||
Sbjct 1007 CGCATTCCCAGCGCA-CATACCTGGTC--TTTTGCTGCCTGTCGTCACCGCCACCCCAACAGCCGGGCAGGCAT 1077
Query 1432 -------------------------------------------------------------------------- 1431
Sbjct 1078 CGCTGCCGCCATCTTGGAAGCGGGCGCTGCGGGGGCGGGGTCTCGCGTCATGGGGCGGGGCCTCGGGGCGGAGC 1151
Query 1432 ------------- 1431
Sbjct 1152 CACCCGGGCTGAC 1164
