Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_01287
Subject:
XM_017008453.2
Aligned Length:
1398
Identities:
504
Gaps:
768

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGAGCCTCCATTTCTTATACTACTGCAGTGAACCAACATTGGATGTGAAAATTGCCTTTTGTCAGGGATTCGA  74

Query    1  ----------------------------------------ATGAGCAGAAGCAAGCGTGACAACAATTTTTATA  34
                                                    |||||||.||||||...|||||||.|.||.||.|
Sbjct   75  TAAACAAGTGGATGTGTCATATATTGCCAAACATTACAACATGAGCAAAAGCAAAGTTGACAACCAGTTCTACA  148

Query   35  GTGTAGAGATTGGAGATTCTACATTCACAGTCCTGAAACGATATCAGAATTTAAAACCTATAGGCTCAGGAGCT  108
            ||||.||..|.|||||.||.||.||||||||.||.||.||.||.||||||.||||.|||||.|||||.||.|||
Sbjct  149  GTGTGGAAGTGGGAGACTCAACCTTCACAGTTCTCAAGCGCTACCAGAATCTAAAGCCTATTGGCTCTGGGGCT  222

Query  109  CAAGGAATAGTATGCGCAGCTTATGATGCCATTCTTGAAAGAAATGTTGCAATCAAGAAGCTAAGCCGACCATT  182
            ||.||.|||||.||.||.||.||||||||..|.|||||.||||||||.||.||.||||||||.|||.||||.||
Sbjct  223  CAGGGCATAGTTTGTGCCGCGTATGATGCTGTCCTTGACAGAAATGTGGCCATTAAGAAGCTCAGCAGACCCTT  296

Query  183  TCAGAATCAGACTCATGCCAAGCGGGCCTACAGAGAGCTAGTTCTTATGAAATGTGTTAATCACAAAAATATAA  256
            ||||||.||.||.|||||||||.|.||.|||.|.|||||.||.||.|||||.|||||.||.||.|||||.||.|
Sbjct  297  TCAGAACCAAACACATGCCAAGAGAGCGTACCGGGAGCTGGTCCTCATGAAGTGTGTGAACCATAAAAACATTA  370

Query  257  TTGGCCTTTTGAATGTTTTCACACCACAGAAATCCCTAGAAGAATTTCAAGATGTTTACATAGTCATGGAGCTC  330
            ||.|..|.||.|||||.||||||||.||||||.|.||.||.||.||.||||||||||||.||||.|||||.||.
Sbjct  371  TTAGTTTATTAAATGTCTTCACACCCCAGAAAACGCTGGAGGAGTTCCAAGATGTTTACTTAGTAATGGAACTG  444

Query  331  ATGGATGCAAATCTT-TGCCAAGTGATTCAGATGGAGCTAGATCATGAAAGAATGTCCTACCTTCTCTATCAGA  403
            ||||||||.|| ||| ||.|||||||||||||||||..||||.|||||..|||||||.|||||.||.||.||.|
Sbjct  445  ATGGATGCCAA-CTTATGTCAAGTGATTCAGATGGAATTAGACCATGAGCGAATGTCTTACCTGCTGTACCAAA  517

Query  404  TGCTGTGTGGAATCAAGCACCTTCATTCTGCTGGAATTATTCATCGGGACTTAAAGCCCAGTAATATAGTAGTA  477
            ||.|||||||.||.||||||||.||||||||||||||||||||..||||.|||||.||.|||||.||.|||||.
Sbjct  518  TGTTGTGTGGCATTAAGCACCTCCATTCTGCTGGAATTATTCACAGGGATTTAAAACCAAGTAACATTGTAGTC  591

Query  478  AAATCTGATTGCACTTTGAAGATTCTTGACTTCGGTCTGGCCAGGACTGCAGGAACGAGTTTTATGATGACGCC  551
            ||.|||||||||||.|||||.||.||.|||||.||.|||||||||||.|||||.||.||.||.||||||||.||
Sbjct  592  AAGTCTGATTGCACATTGAAAATCCTGGACTTTGGACTGGCCAGGACAGCAGGCACAAGCTTCATGATGACTCC  665

Query  552  TTATGTAGTGACTCGCTACTACAGAGCACCCGAGGTCATCCTTGGCATGGGCTACAAGGAAAACGTTGACATTT  625
            .|||||.|||||.||.||.||||||||.||.|||||||||||.||.||||||||||||||.||||  |||  ||
Sbjct  666  ATATGTGGTGACACGTTATTACAGAGCCCCTGAGGTCATCCTGGGGATGGGCTACAAGGAGAACG--GAC--TT  735

Query  626  GGT--CAGTTGGGTGCATCATGGGAGAAATGATCAAAGGTGGTGTTTTGTTCCCAGGTACAGATCATATTGATC  697
            ..|  ||       .||.|                                                       
Sbjct  736  CCTACCA-------ACAAC-------------------------------------------------------  747

Query  698  AGTGGAATAAAGTTATTGAACAGCTTGGAACACCATGTCCTGAATTCATGAAGAAACTGCAACCAACAGTAAGG  771
                                                                                      
Sbjct  748  --------------------------------------------------------------------------  747

Query  772  ACTTACGTTGAAAACAGACCTAAATATGCTGGATATAGCTTTGAGAAACTCTTCCCTGATGTCCTTTTCCCAGC  845
                                                                                      
Sbjct  748  --------------------------------------------------------------------------  747

Query  846  TGACTCAGAACACAACAAACTTAAAGCCAGTCAGGCAAGGGATTTGTTATCCAAAATGCTGGTAATAGATGCAT  919
                                                                                      
Sbjct  748  --------------------------------------------------------------------------  747

Query  920  CTAAAAGGATCTCTGTAGATGAAGCTCTCCAACACCCGTACATCAATGTCTGGTATGATCCTTCTGAAGCAGAA  993
                                                                                      
Sbjct  748  --------------------------------------------------------------------------  747

Query  994  GCTCCACCACCAAAGATCCCTGACAAGCAGTTAGATGAAAGGGAACACACAATAGAAGAGTGGAAAGAATTGAT  1067
                                                                                      
Sbjct  748  --------------------------------------------------------------------------  747

Query 1068  ATATAAGGAAGTTATGGACTTGGAGGAGAGAACCAAGAATGGAGTTATACGGGGGCAGCCCTCTCCTTTAGGTG  1141
                                                                                      
Sbjct  748  --------------------------------------------------------------------------  747

Query 1142  CAGCAGTGATCAATGGCTCTCAGCATCCATCATCATCGTCGTCTGTCAATGATGTGTCTTCAATGTCAACAGAT  1215
                                                                                      
Sbjct  748  --------------------------------------------------------------------------  747

Query 1216  CCGACTTTGGCCTCTGATACAGACAGCAGTCTAGAAGCAGCAGCTGGGCCTCTGGGCTGCTGTAGA  1281
                                                                              
Sbjct  748  ------------------------------------------------------------------  747