Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_01287
- Subject:
- XM_017008453.2
- Aligned Length:
- 1398
- Identities:
- 504
- Gaps:
- 768
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAGCCTCCATTTCTTATACTACTGCAGTGAACCAACATTGGATGTGAAAATTGCCTTTTGTCAGGGATTCGA 74
Query 1 ----------------------------------------ATGAGCAGAAGCAAGCGTGACAACAATTTTTATA 34
|||||||.||||||...|||||||.|.||.||.|
Sbjct 75 TAAACAAGTGGATGTGTCATATATTGCCAAACATTACAACATGAGCAAAAGCAAAGTTGACAACCAGTTCTACA 148
Query 35 GTGTAGAGATTGGAGATTCTACATTCACAGTCCTGAAACGATATCAGAATTTAAAACCTATAGGCTCAGGAGCT 108
||||.||..|.|||||.||.||.||||||||.||.||.||.||.||||||.||||.|||||.|||||.||.|||
Sbjct 149 GTGTGGAAGTGGGAGACTCAACCTTCACAGTTCTCAAGCGCTACCAGAATCTAAAGCCTATTGGCTCTGGGGCT 222
Query 109 CAAGGAATAGTATGCGCAGCTTATGATGCCATTCTTGAAAGAAATGTTGCAATCAAGAAGCTAAGCCGACCATT 182
||.||.|||||.||.||.||.||||||||..|.|||||.||||||||.||.||.||||||||.|||.||||.||
Sbjct 223 CAGGGCATAGTTTGTGCCGCGTATGATGCTGTCCTTGACAGAAATGTGGCCATTAAGAAGCTCAGCAGACCCTT 296
Query 183 TCAGAATCAGACTCATGCCAAGCGGGCCTACAGAGAGCTAGTTCTTATGAAATGTGTTAATCACAAAAATATAA 256
||||||.||.||.|||||||||.|.||.|||.|.|||||.||.||.|||||.|||||.||.||.|||||.||.|
Sbjct 297 TCAGAACCAAACACATGCCAAGAGAGCGTACCGGGAGCTGGTCCTCATGAAGTGTGTGAACCATAAAAACATTA 370
Query 257 TTGGCCTTTTGAATGTTTTCACACCACAGAAATCCCTAGAAGAATTTCAAGATGTTTACATAGTCATGGAGCTC 330
||.|..|.||.|||||.||||||||.||||||.|.||.||.||.||.||||||||||||.||||.|||||.||.
Sbjct 371 TTAGTTTATTAAATGTCTTCACACCCCAGAAAACGCTGGAGGAGTTCCAAGATGTTTACTTAGTAATGGAACTG 444
Query 331 ATGGATGCAAATCTT-TGCCAAGTGATTCAGATGGAGCTAGATCATGAAAGAATGTCCTACCTTCTCTATCAGA 403
||||||||.|| ||| ||.|||||||||||||||||..||||.|||||..|||||||.|||||.||.||.||.|
Sbjct 445 ATGGATGCCAA-CTTATGTCAAGTGATTCAGATGGAATTAGACCATGAGCGAATGTCTTACCTGCTGTACCAAA 517
Query 404 TGCTGTGTGGAATCAAGCACCTTCATTCTGCTGGAATTATTCATCGGGACTTAAAGCCCAGTAATATAGTAGTA 477
||.|||||||.||.||||||||.||||||||||||||||||||..||||.|||||.||.|||||.||.|||||.
Sbjct 518 TGTTGTGTGGCATTAAGCACCTCCATTCTGCTGGAATTATTCACAGGGATTTAAAACCAAGTAACATTGTAGTC 591
Query 478 AAATCTGATTGCACTTTGAAGATTCTTGACTTCGGTCTGGCCAGGACTGCAGGAACGAGTTTTATGATGACGCC 551
||.|||||||||||.|||||.||.||.|||||.||.|||||||||||.|||||.||.||.||.||||||||.||
Sbjct 592 AAGTCTGATTGCACATTGAAAATCCTGGACTTTGGACTGGCCAGGACAGCAGGCACAAGCTTCATGATGACTCC 665
Query 552 TTATGTAGTGACTCGCTACTACAGAGCACCCGAGGTCATCCTTGGCATGGGCTACAAGGAAAACGTTGACATTT 625
.|||||.|||||.||.||.||||||||.||.|||||||||||.||.||||||||||||||.|||| ||| ||
Sbjct 666 ATATGTGGTGACACGTTATTACAGAGCCCCTGAGGTCATCCTGGGGATGGGCTACAAGGAGAACG--GAC--TT 735
Query 626 GGT--CAGTTGGGTGCATCATGGGAGAAATGATCAAAGGTGGTGTTTTGTTCCCAGGTACAGATCATATTGATC 697
..| || .||.|
Sbjct 736 CCTACCA-------ACAAC------------------------------------------------------- 747
Query 698 AGTGGAATAAAGTTATTGAACAGCTTGGAACACCATGTCCTGAATTCATGAAGAAACTGCAACCAACAGTAAGG 771
Sbjct 748 -------------------------------------------------------------------------- 747
Query 772 ACTTACGTTGAAAACAGACCTAAATATGCTGGATATAGCTTTGAGAAACTCTTCCCTGATGTCCTTTTCCCAGC 845
Sbjct 748 -------------------------------------------------------------------------- 747
Query 846 TGACTCAGAACACAACAAACTTAAAGCCAGTCAGGCAAGGGATTTGTTATCCAAAATGCTGGTAATAGATGCAT 919
Sbjct 748 -------------------------------------------------------------------------- 747
Query 920 CTAAAAGGATCTCTGTAGATGAAGCTCTCCAACACCCGTACATCAATGTCTGGTATGATCCTTCTGAAGCAGAA 993
Sbjct 748 -------------------------------------------------------------------------- 747
Query 994 GCTCCACCACCAAAGATCCCTGACAAGCAGTTAGATGAAAGGGAACACACAATAGAAGAGTGGAAAGAATTGAT 1067
Sbjct 748 -------------------------------------------------------------------------- 747
Query 1068 ATATAAGGAAGTTATGGACTTGGAGGAGAGAACCAAGAATGGAGTTATACGGGGGCAGCCCTCTCCTTTAGGTG 1141
Sbjct 748 -------------------------------------------------------------------------- 747
Query 1142 CAGCAGTGATCAATGGCTCTCAGCATCCATCATCATCGTCGTCTGTCAATGATGTGTCTTCAATGTCAACAGAT 1215
Sbjct 748 -------------------------------------------------------------------------- 747
Query 1216 CCGACTTTGGCCTCTGATACAGACAGCAGTCTAGAAGCAGCAGCTGGGCCTCTGGGCTGCTGTAGA 1281
Sbjct 748 ------------------------------------------------------------------ 747