Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_01305
- Subject:
- NM_001301709.2
- Aligned Length:
- 1279
- Identities:
- 637
- Gaps:
- 581
Alignment
Query 1 ATGGGAACCCTCTCAGCCCCTCCCTGCACACAGCGCATCAAATGGAAGGGGCTCCTGCTCACAGCATCACTTTT 74
|||||..|||||.||||||||.||||||||||||||||||..||||||||||||||||||||||||||||||||
Sbjct 1 ATGGGGCCCCTCCCAGCCCCTTCCTGCACACAGCGCATCACCTGGAAGGGGCTCCTGCTCACAGCATCACTTTT 74
Query 75 AAACTTCTGGAACCTGCCCACCACTGCCCAAGTCACGATTGAAGCCGAGCCAACCAAAGTTTCCGAGGGGAAGG 148
||||||||||||||.|||||||||||||.|||||||||||||||||.|||||.||||||||||.||||||||||
Sbjct 75 AAACTTCTGGAACCCGCCCACCACTGCCGAAGTCACGATTGAAGCCCAGCCACCCAAAGTTTCTGAGGGGAAGG 148
Query 149 ATGTTCTTCTACTTGTCCACAATTTGCCCCAGAATCTTACCGGCTACATCTGGTACAAAGGGCAAATGAGGGAC 222
||||||||||||||||||||||||||||||||||||||.|.||||||.||||||||||||||.||||||.||||
Sbjct 149 ATGTTCTTCTACTTGTCCACAATTTGCCCCAGAATCTTCCTGGCTACTTCTGGTACAAAGGGGAAATGACGGAC 222
Query 223 CTCTACCATTACATTACATCATATGTAGTAGACGGTGAAATAATTATATATGGGCCTGCATATAGTGGACGAGA 296
||||||||||||||||.|||.|||.||||.||.|||.|||||||||||||||||||||||||.||||||.||||
Sbjct 223 CTCTACCATTACATTATATCGTATATAGTTGATGGTAAAATAATTATATATGGGCCTGCATACAGTGGAAGAGA 296
Query 297 AACAGCATATTCCAATGCATCCCTGCTGATCCAGAATGTCACCCGGGAGGACGCAGGATCCTACACCTTACACA 370
|||||.|||||||||.||||||||||||||||||||||||||||||.||||.||||||.|||||||||||||||
Sbjct 297 AACAGTATATTCCAACGCATCCCTGCTGATCCAGAATGTCACCCGGAAGGATGCAGGAACCTACACCTTACACA 370
Query 371 TCATAAAGGGAGATGATGGGACTAGAGGAGTAACTGGACGTTTCACCTTCACCTTACACCTGGAGACTCCTAAG 444
||||||||.|||.|||||.||||||||.||.||.|.|||.||||||||||||||||.|
Sbjct 371 TCATAAAGCGAGGTGATGAGACTAGAGAAGAAATTCGACATTTCACCTTCACCTTATA---------------- 428
Query 445 CCCTCCATCTCCAGCAGCAACTTAAATCCCAGGGAGACCATGGAGGCTGTGAGCTTAACCTGTGACCCTGAGAC 518
Sbjct 429 -------------------------------------------------------------------------- 428
Query 519 TCCAGACGCAAGCTACCTGTGGTGGATGAATGGTCAGAGCCTCCCTATGACTCACAGCTTGAAGCTGTCCGAAA 592
Sbjct 429 -------------------------------------------------------------------------- 428
Query 593 CCAACAGGACCCTCTTTCTATTGGGTGTCACAAAGTATACTGCAGGACCCTATGAATGTGAAATACGGAACCCA 666
Sbjct 429 -------------------------------------------------------------------------- 428
Query 667 GTGAGTGCCAGCCGCAGTGACCCAGTCACCCTGAATCTCCTCCCGAAGCTGCCCAAGCCCTACATCACCATCAA 740
Sbjct 429 -------------------------------------------------------------------------- 428
Query 741 CAACTTAAACCCCAGGGAGAATAAGGATGTCTTAAACTTCACCTGTGAACCTAAGAGTGAGAACTACACCTACA 814
Sbjct 429 -------------------------------------------------------------------------- 428
Query 815 TTTGGTGGCTAAATGGTCAGAGCCTCCCGGTCAGTCCCAGGGTAAAGCGACCCATTGAAAACAGGATCCTCATT 888
Sbjct 429 -------------------------------------------------------------------------- 428
Query 889 CTACCCAGTGTCACGAGAAATGAAACAGGACCCTATCAATGTGAAATACGGGACCGATATGGTGGCATCCGCAG 962
Sbjct 429 -------------------------------------------------------------------------- 428
Query 963 TGACCCAGTCACCCTGAATGTCCTCTATGGTCCAGACCTCCCCAGAATTTACCCTTCATTCACCTATTACCGTT 1036
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 429 ------------------------CTATGGTCCAGACCTCCCCAGAATTTACCCTTCATTCACCTATTACCGTT 478
Query 1037 CAGGAGAAGTCCTCTACTTGTCCTG-TTCTGCGGACTCTAACCCACCGGCACAGTATTCTTGGACAATTAATGA 1109
||||||||..||||.|||||||||| ||| .||||.|||||||||||||||.||||||.||||||||||||||.
Sbjct 479 CAGGAGAAAACCTCGACTTGTCCTGCTTC-ACGGAATCTAACCCACCGGCAGAGTATTTTTGGACAATTAATGG 551
Query 1110 AAAGTTTCAGCTACCAGGACAAAAGCTCTTTATCCGCCATATTACTACAAAGCATAGCGGGCTCTATGTTTGCT 1183
.||||||||||.|.|||||||||||||||||||||.|||.|||||||.|||.||||||||||||||||.|||||
Sbjct 552 GAAGTTTCAGCAATCAGGACAAAAGCTCTTTATCCCCCAAATTACTAGAAATCATAGCGGGCTCTATGCTTGCT 625
Query 1184 CTGTTCGTAACTCAGCCACTGGCAAGGAAAGCTCCAAATCCATGACAGTCGAAGTCTCT--------------- 1242
||||||.|||||||||||||||||||||||.|||||||||||||||||||.||||||||
Sbjct 626 CTGTTCATAACTCAGCCACTGGCAAGGAAATCTCCAAATCCATGACAGTCAAAGTCTCTGGTCCCTGCCATGGA 699
Query 1243 GACTGGACAG-TTCCC----- 1257
|||..||||| .||.|
Sbjct 700 GACCTGACAGAGTCTCAGTCA 720
