Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_01524
- Subject:
- XR_001750513.2
- Aligned Length:
- 2058
- Identities:
- 813
- Gaps:
- 1245
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATTTTGTGGAGCGCCAGAGCTGCTAAGTGCGTCAGTTGTGGAGTGGCGTAGACGAGTTAAGTCCTGGTCTGCGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGAGGTCGACGACTCCGTCGCAGACTACGGACCTGTCTGGGTCTCAGCCGCCAAAGACCCCGTCCGGTAGGAAG 148
Query 1 ---------------ATGAGTGGCTGTCGGGTATTCATCGGGAGACTAAATCCAGCGGCCAGGGAGAAGGACGT 59
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TACTAGCCGGACATCATGAGTGGCTGTCGGGTATTCATCGGGAGACTAAATCCAGCGGCCAGGGAGAAGGACGT 222
Query 60 GGAAAGATTCTTCAAGGGATATGGACGGATAAGAGATATTGATCTGAAAAGAGGCTTTGGTTTTGTGGAATTTG 133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GGAAAGATTCTTCAAGGGATATGGACGGATAAGAGATATTGATCTGAAAAGAGGCTTTGGTTTTGTGGAATTTG 296
Query 134 AGGATCCAAGGGATGCAGATGATGCTGTGTATGAGCTTGATGGAAAAGAACTCTGTAGTGAAAGGGTTACTATT 207
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 AGGATCCAAGGGATGCAGATGATGCTGTGTATGAGCTTGATGGAAAAGAACTCTGTAGTGAAAGGGTTACTATT 370
Query 208 GAACATGCTAGGGCTCGGTCACGAGGTGGAAGAGGTAGAGGACGATACTCTGACCGTTTTAGTAGTCGCAGACC 281
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GAACATGCTAGGGCTCGGTCACGAGGTGGAAGAGGTAGAGGACGATACTCTGACCGTTTTAGTAGTCGCAGACC 444
Query 282 TCGAAATGATAGACGAAATGCTCCACCTGTAAGAACAGAAAATCGTCTTATAGTTGAGAATTTATCCTCAAGAG 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 TCGAAATGATAGACGAAATGCTCCACCTGTAAGAACAGAAAATCGTCTTATAGTTGAGAATTTATCCTCAAGAG 518
Query 356 TCAGCTGGC----------------------------------------------------------------- 364
|||||||||
Sbjct 519 TCAGCTGGCAGCCTGTCTGTGTCGTTGGCCTTATGACGAGGAGTGCCTGTGGGTTATCCTAATCGTTGTCTTGG 592
Query 365 -------------------------------------------------------------------------- 364
Sbjct 593 TCACTCTTGGTTGGGCCTGGTTGACTTTGCCAGTCAGCTCCTACAGTGATCAGTTGGCCACCTCTAGATCTGTG 666
Query 365 -------------------------------------------------------------------------- 364
Sbjct 667 TTTGCCGGTCTAGACGTTATCGGTGCACTTCCTTGAAGTGCCAGGTTGCAGCGATCCCAGAGCGTTGATAACGT 740
Query 365 -------------------------------------------------------------------------- 364
Sbjct 741 GATCTGATCCCTAAGTTGAGACCTGTCTTCCTGTAACGCTTCCGAATAAGAGGTCCGGTCGAAAAGAGTTGAAA 814
Query 365 -------------------------------------------------------------------------- 364
Sbjct 815 GATACGAAATTAGGTGGTCGTTGGAATCCTGATCGCAGTAAAGTGGTCCTTGGTAACTGCTCGAGTAGAACATG 888
Query 365 -------------------------------------------------------------------------- 364
Sbjct 889 TCTGCATCCGCCAATAGTCCGCTAATAGGGAGGGCTGTGCGATTAAAGGCTTCCATCGATTGGGTAGTGTCCTT 962
Query 365 -------------------------------------------------------------------------- 364
Sbjct 963 CAAGTGGGTGGCGAAGAGCCAGTCGGGCATATGTCATGAAGGTTTCTCCGACCGATTAATGGTTTGCTGCTTGA 1036
Query 365 -----------------------AGGATCTCAAAGATTTCATGAGACAAGCTGGGGAAGTAACGTTTGCGGATG 415
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 CTAGCCTAGGGAAATAATAATAAAGGATCTCAAAGATTTCATGAGACAAGCTGGGGAAGTAACGTTTGCGGATG 1110
Query 416 CACACCGACCTAAATTAAATGAAGGGGTGGTTGAGTTTGCCTCTTATGGTGACTTAAAGAATGCTATTGAAAAA 489
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 CACACCGACCTAAATTAAATGAAGGGGTGGTTGAGTTTGCCTCTTATGGTGACTTAAAGAATGCTATTGAAAAA 1184
Query 490 CTTTCTGGAAAGGAAATAAATGGGAGAAAAATAAAATTAATTGAAGGCAGCAAAAGGCACAGTAGGTCAAGAAG 563
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1185 CTTTCTGGAAAGGAAATAAATGGGAGAAAAATAAAATTAATTGAAGGCAGCAAAAGGCAC---AGGTCAAGAAG 1255
Query 564 CAGGTCTCGATCCCGGACCAGAAGTTCCTCTAGGTCTCGTAGCCGATCCCGTTCCCGTAGTCGCAAATCTTACA 637
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1256 CAGGTCTCGATCCCGGACCAGAAGTTCCTCTAGGTCTCGTAGCCGATCCCGTTCCCGTAGTCGCAAATCTTACA 1329
Query 638 GCCGGTCAAGAAGCAGGAGCAGGAGCCGGAGCCGGAGCAAGTCCCGTTCTGTTAGTAGGTCTCCCGTGCCTGAG 711
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1330 GCCGGTCAAGAAGCAGGAGCAGGAGCCGGAGCCGGAGCAAGTCCCGTTCTGTTAGTAGGTCTCCCGTGCCTGAG 1403
Query 712 AAGAGCCAGAAACGTGGTTCTTCAAGTAGATCTAAGTCTCCAGCATCTGTGGATCGCCAGAGGTCCCGGTCCCG 785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1404 AAGAGCCAGAAACGTGGTTCTTCAAGTAGATCTAAGTCTCCAGCATCTGTGGATCGCCAGAGGTCCCGGTCCCG 1477
Query 786 ATCAAGGTCCAGATCAGTTGACAGTGGCAAT------------------------------------------- 816
|||||||||||||||||||||||||||||||
Sbjct 1478 ATCAAGGTCCAGATCAGTTGACAGTGGCAATTAAACTGTAAATAACTTGCCCTGGGGGCCTTTTTTTAAAAAAC 1551
Query 817 -------------------------------------------------------------------------- 816
Sbjct 1552 AAAAACCACAAAAATTCCCAAACCATACTTGCTAAAAATTCTGGTAAGTATGTGCTTTTCTGTGGGGGTGGGAT 1625
Query 817 -------------------------------------------------------------------------- 816
Sbjct 1626 TTGGAAGGGGGGTTGGGTTGGGCTGGATATCTTTGTAGATGTGGACCACCAAGGGGTTGTTGAAAACTAATTGT 1699
Query 817 -------------------------------------------------------------------------- 816
Sbjct 1700 ATTAAATGTCTTTTGATAAGCCTTCTGCTCACATTTTTGTGAATGTCTGAAGTATATAGTTTGTGTATATTGAC 1773
Query 817 -------------------------------------------------------------------------- 816
Sbjct 1774 AGAGCTCTTTTATAACTAAAGCAAATTTAATTTTTTTGTACTAGAAAAAAATTTGAACATTTTAGTTCTTGGTT 1847
Query 817 -------------------------------------------------------------------------- 816
Sbjct 1848 ATAAAAATGTTAATTCAGAATTAGTTTAATGCCTTAATTAAACTAATTAATAGCTTTGGACACTTAAAAGAGCT 1921
Query 817 -------------------------------------------------------------------------- 816
Sbjct 1922 CTAAATTTGCTTGTACATAAAGGCTTAATTTGTTTTCCTTGTTAGGGTCAAGGGTGTCCTCCACTCTTTAACAG 1995
Query 817 ------------------------------------------------------------ 816
Sbjct 1996 CTGCTGGACAGACACATTAGAGCAGCTGTTTGTTATTGATAATAAAATATTATAAAACTA 2055
