Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_01721
Subject:
NR_029431.1
Aligned Length:
2096
Identities:
1393
Gaps:
703

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AAGCCCTAGAGAGGCTACCACCGGTACACCCCGCCTTCCCACCCACGGGTAAAGTGGCGCCGCCTACGCACCGG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CACAGCCCCTGGGCTCCCGCCCCGGCGCGGAGACCACCGTGGACATCCGGGGGCGGGAGGCCGCTCTGGCCCCA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  AGCGGAGCCTCTCTCTGGTAGACGAGCCCGAGGGAGCCCTTCTGGGCGCGGCGCCGCGGAGCTGCTCTATGCTC  222

Query    1  -----------------------------------------------------------ATGGCGGCTGCCGCG  15
                                                                       |||||||||||||||
Sbjct  223  CAACCGGAAGTGCTCTTCACCGCCGGCCTCCCACCCAGCTCTCTGGTCCCGGCGGTAAGATGGCGGCTGCCGCG  296

Query   16  GAGTGCGATGTGGTAATGGCGGCGACCGAGCCGGAGCTGCTCGACGACCAAGAGGCGAAGAGGGAAGCAGAGAC  89
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||              
Sbjct  297  GAGTGCGATGTGGTAATGGCGGCGACCGAGCCGGAGCTGCTCGACGACCAAGAGGCGAAG--------------  356

Query   90  TTTCAAGGAACAAGGAAATGCATACTATGCCAAGAAAGATTACAATGAAGCTTATAATTATTATACAAAAGCCA  163
                                                                                      
Sbjct  357  --------------------------------------------------------------------------  356

Query  164  TAGATATGTGTCCTAAAAATGCTAGCTATTATGGTAATCGAGCAGCCACCTTGATGATGCTTGGAAGGTTCCGG  237
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  357  -AGATATGTGTCCTAAAAATGCTAGCTATTATGGTAATCGAGCAGCCACCTTGATGATGCTTGGAAGGTTCCGG  429

Query  238  GAAGCTCTTGGAGATGCACAACAGTCAGTGAGGTTGGATGACAGTTTTGTCCGGGGACATCTACGAGAGGGCAA  311
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  430  GAAGCTCTTGGAGATGCACAACAGTCAGTGAGGTTGGATGACAGTTTTGTCCGGGGACATCTACGAGAGGGCAA  503

Query  312  GTGCCACCTCTCTCTGGGGAATGCCATGGCAGCATGTCGCAGCTTCCAGAGAGCCCTAGAACTGGATCATAAAA  385
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  504  GTGCCACCTCTCTCTGGGGAATGCCATGGCAGCATGTCGCAGCTTCCAGAGAGCCCTAGAACTGGATCATAAAA  577

Query  386  ATGCTCAGGCACAACAAGAGTTCAAGAATGCTAATGCAGTCATGGAATATGAGAAAATAGCAGAAACAGATTTT  459
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  578  ATGCTCAGGCACAACAAGAGTTCAAGAATGCTAATGCAGTCATGGAATATGAGAAAATAGCAGAAACAGATTTT  651

Query  460  GAGAAGCGAGATTTTCGGAAGGTTGTTTTCTGCATGGACCGTGCCCTAGAATTTGCCCCTGCCTGCCATCGCTT  533
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  652  GAGAAGCGAGATTTTCGGAAGGTTGTTTTCTGCATGGACCGTGCCCTAGAATTTGCCCCTGCCTGCCATCGCTT  725

Query  534  CAAAATCCTCAAGGCAGAATGTTTAGCAATGCTGGGTCGTTATCCAGAAGCACAGTCTGTGGCTAGTGACATTC  607
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  726  CAAAATCCTCAAGGCAGAATGTTTAGCAATGCTGGGTCGTTATCCAGAAGCACAGTCTGTGGCTAGTGACATTC  799

Query  608  TACGAATGGATTCCACCAATGCAGATGCTCTGTATGTACGAGGTCTTTGCCTTTATTACGAAGATTGTATTGAG  681
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  800  TACGAATGGATTCCACCAATGCAGATGCTCTGTATGTACGAGGTCTTTGCCTTTATTACGAAGATTGTATTGAG  873

Query  682  AAGGCAGTTCAGTTTTTCGTACAGGCTCTCAGGATGGCTCCTGACCACGAGAAGGCCTGCATTGCCTGCAGAAA  755
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  874  AAGGCAGTTCAGTTTTTCGTACAGGCTCTCAGGATGGCTCCTGACCACGAGAAGGCCTGCATTGCCTGCAGAAA  947

Query  756  TGCCAAAGCACTCAAAGCAAAGAAAGAAGATGGGAATAAAGCATTTAAGGAAGGAAATTACAAACTAGCATATG  829
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  948  TGCCAAAGCACTCAAAGCAAAGAAAGAAGATGGGAATAAAGCATTTAAGGAAGGAAATTACAAACTAGCATATG  1021

Query  830  AACTGTACACAGAAGCCCTGGGGATAGACCCCAACAATATAAAAACAAATGCTAAACTCTACTGTAATCGGGGT  903
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1022  AACTGTACACAGAAGCCCTGGGGATAGACCCCAACAATATAAAAACAAATGCTAAACTCTACTGTAATCGGGGT  1095

Query  904  ACGGTTAATTCCAAGCTTAGGAAACTAGATGATGCAATAGAAGACTGCACAAATGCAGTGAAGCTTGATGACAC  977
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1096  ACGGTTAATTCCAAGCTTAGGAAACTAGATGATGCAATAGAAGACTGCACAAATGCAGTGAAGCTTGATGACAC  1169

Query  978  TTACATAAAAGCCTACTTGAGAAGAGCTCAGTGTTACATGGACACAGAACAGTATGAAGAAGCAGTACGAGACT  1051
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1170  TTACATAAAAGCCTACTTGAGAAGAGCTCAGTGTTACATGGACACAGAACAGTATGAAGAAGCAGTACGAGACT  1243

Query 1052  ATGAAAAAGTATACCAGACAGAGAAAACAAAAGAACACAAACAGCTCCTAAAAAATGCGCAGCTGGAACTGAAG  1125
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1244  ATGAAAAAGTATACCAGACAGAGAAAACAAAAGAACACAAACAGCTCCTAAAAAATGCGCAGCTGGAACTGAAG  1317

Query 1126  AAGAGTAAGAGGAAAGATTACTACAAGATTCTAGGAGTGGACAAGAATGCCTCTGAGGACGAGATCAAGAAAGC  1199
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1318  AAGAGTAAGAGGAAAGATTACTACAAGATTCTAGGAGTGGACAAGAATGCCTCTGAGGACGAGATCAAGAAAGC  1391

Query 1200  TTATCGGAAACGGGCCTTGATGCACCATCCAGATCGGCATAGTGGAGCCAGTGCTGAGGTTCAGAAGGAGGAGG  1273
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1392  TTATCGGAAACGGGCCTTGATGCACCATCCAGATCGGCATAGTGGAGCCAGTGCTGAGGTTCAGAAGGAGGAGG  1465

Query 1274  AGAAGAAGTTCAAGGAAGTTGGAGAGGCCTTTACTATCCTCTCTGATCCCAAGAAAAAGACTCGCTATGACAGT  1347
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1466  AGAAGAAGTTCAAGGAAGTTGGAGAGGCCTTTACTATCCTCTCTGATCCCAAGAAAAAGACTCGCTATGACAGT  1539

Query 1348  GGACAGGACCTAGATGAGGAGGGCATGAATATGGGTGATTTTGATCCAAACAATATCTTCAAGGCATTCTTTGG  1421
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1540  GGACAGGACCTAGATGAGGAGGGCATGAATATGGGTGATTTTGATCCAAACAATATCTTCAAGGCATTCTTTGG  1613

Query 1422  CGGTCCTGGCGGCTTCAGCTTTGAAGCATCTGGTCCAGGGAATTTCTTTTTTCAATTTGGC-------------  1482
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||             
Sbjct 1614  CGGTCCTGGCGGCTTCAGCTTTGAAGCATCTGGTCCAGGGAATTTCTTTTTTCAATTTGGCTAATGAAGGGCAA  1687

Query 1483  --------------------------------------------------------------------------  1482
                                                                                      
Sbjct 1688  CCACCCAGAACCCAGAAAATGCAGATTCACTCAGTTTAATCTTGAATGTGGAAACAGTTCACCTCCTCCCTTCA  1761

Query 1483  --------------------------------------------------------------------------  1482
                                                                                      
Sbjct 1762  TCACGTCTCCGTGTGCTTAGAGCAGTTTCGTTTTCTCAGTTGGATGCCCTGTGTCTCTGTGAGTGGGGTGGAGC  1835

Query 1483  --------------------------------------------------------------------------  1482
                                                                                      
Sbjct 1836  AAAGGGAACCAATGCCGAAGACCGAGGGCAGGGGAGGGAGGCGGGGGTGGACAGGGAGGCAGCTTGTGAATTTT  1909

Query 1483  --------------------------------------------------------------------------  1482
                                                                                      
Sbjct 1910  TGTTTTACTGTTTAACTTTATTAAAAAAGAAAAAAAAAAGAGAATAAAATGTTTTGACCCTTCCTGGCCCTTTG  1983

Query 1483  ------------------------  1482
                                    
Sbjct 1984  CTCTGGAAAAAAAAAAAAAAAAAA  2007

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