Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_01804
- Subject:
- NM_001348722.1
- Aligned Length:
- 1473
- Identities:
- 311
- Gaps:
- 1143
Alignment
Query 1 ATGCCCTGCTGTAGTCACAGGAGGTGTAGAGAGGACCCCGGGACATCTGAAAGCCAGGAAATGGAGGAGTGGGC 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 TTTGCTGGATATTTCCCAGAGGAAACTCTACAAGGAAGTGATGCTGGAAACTTTCAGGAACCTGACCTCTGTAG 148
|||||||||||||||.||||||||||||||.|||
Sbjct 1 ----------------------------------------ATGCTGGAAACTTTCTGGAACCTGACCTCTATAG 34
Query 149 GAAAAAGTTGGAAAGACCAGAACATTGAATATGAGTACCAAAACCCCAGGAGAAACTTCAGGAGTCTCATAGAA 222
||||||..|||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||.||||
Sbjct 35 GAAAAAAGTGGAAAGACCAGAACATTGAATATGAGTACCAAAACCCCAGGAGAAACTTCAGGAGTGTCACAGAA 108
Query 223 AAGAAAGTCAATGAAATTAAAGATGACAGTCATTGTGGAGAAACTTTTACCCAGGTTCCAGATGACAGGCTGAA 296
.||||||||||||||||||||||.||||||||||||||||||||||||||||..||||||||||||||||||||
Sbjct 109 GAGAAAGTCAATGAAATTAAAGAAGACAGTCATTGTGGAGAAACTTTTACCCCAGTTCCAGATGACAGGCTGAA 182
Query 297 CTTCCAGGAGAAGAAAGCTTCTCCTGAAATAAAATCATGTGACAGCTTTGTGTGTGGAGAAGTTGGCCTAGGTA 370
|||||||.||||||||||||||||||||.|||||||||||||||||||||||||| ||||||||||||||||
Sbjct 183 CTTCCAGAAGAAGAAAGCTTCTCCTGAAGTAAAATCATGTGACAGCTTTGTGTGT---GAAGTTGGCCTAGGTA 253
Query 371 ACTCATCTTTTAATATGAACATCAGAGGTGACATTGGACACAAGGCCTATGAGTATCAGGAATATGGACCGAAG 444
|||||||||.|||||||||||||||||||||||.||||||||||||.|.|||.|.|||||||||||||||.|||
Sbjct 254 ACTCATCTTCTAATATGAACATCAGAGGTGACACTGGACACAAGGCATGTGAATGTCAGGAATATGGACCAAAG 327
Query 445 CCA----------------------------------------------------------------------- 447
|||
Sbjct 328 CCATGGAAGAGTCAACAACCTAAAAAAGCCTTCAGATATCACCCCTCCTTGAGAACACAAGAAAGGGATCACAC 401
Query 448 -------------------------------------------------------------------------- 447
Sbjct 402 TGGAAAGAAACCCTATGCTTGTAAAGAATGTGGAAAAAACATTATTTACCATTCAAGCATTCAAAGACACATGG 475
Query 448 -------------------------------------------------------------------------- 447
Sbjct 476 TAGTGCACAGTGGGGATGGACCTTATAAATGTAAGTTTTGTGGGAAAGCATTCCATTGTCTCAGTTTATATCTT 549
Query 448 -------------------------------------------------------------------------- 447
Sbjct 550 ATCCATGAAAGAACTCACACTGGAGAGAAACCGTATGAATGTAAACAATGTGGTAAATCTTTTAGTTATTCTGC 623
Query 448 -------------------------------------------------------------------------- 447
Sbjct 624 TACCCATCGAATACATGAAAGAACTCACATTGGAGAAAAGCCTTATGAATGTCAGGAATGTGGGAAAGCATTCC 697
Query 448 -------------------------------------------------------------------------- 447
Sbjct 698 ATAGTCCCAGATCCTGTCACAGACATGAAAGGAGTCACATGGGAGAGAAGGCTTATCAATGTAAGGAATGTGGA 771
Query 448 -------------------------------------------------------------------------- 447
Sbjct 772 AAAGCATTCATGTGTCCCCGTTATGTTCGTAGACATGAAAGGACCCACTCTAGGAAAAAACTTTATGAATGTAA 845
Query 448 -------------------------------------------------------------------------- 447
Sbjct 846 GCAGTGTGGGAAAGCATTATCCTCTCTTACAAGTTTTCAAACACACATAAGAATGCACTCTGGAGAAAGACCTT 919
Query 448 -------------------------------------------------------------------------- 447
Sbjct 920 ATGAATGTAAGACATGTGGGAAAGGCTTTTATTCTGCCAAGTCATTTCAAAGACATGAAAAAACTCACAGTGGA 993
Query 448 -------------------------------------------------------------------------- 447
Sbjct 994 GAGAAACCGTATAAATGCAAGCAATGTGGTAAAGCCTTCACTCGTTCCGGTTCCTTTCGATATCATGAAAGGAC 1067
Query 448 -------------------------------------------------------------------------- 447
Sbjct 1068 TCACACTGGAGAGAAACCCTATGAGTGTAAGCAATGTGGGAAAGCCTTCAGATCTGCCCCAAATCTTCAATTGC 1141
Query 448 -------------------------------------------------------------------------- 447
Sbjct 1142 ATGGTAGGACTCACACTGGAGAGAAACCGTATCAATGTAAGGAATGTGGGAAAGCTTTCAGATCTGCCTCACAA 1215
Query 448 -------------------------------------------------------------------------- 447
Sbjct 1216 CTTCGAATCCATCGTAGGATTCACACTGGAGAGAAACCCTATGAATGTAAGAAATGTGGGAAAGCCTTCAGATA 1289
Query 448 ------------------------------------------------------------------- 447
Sbjct 1290 TGTCCAGAACTTTCGATTTCATGAAAGGACACAAACACATAAGAATGCACTCTGGAGAAAGACCTTA 1356
