Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_01804
Subject:
NM_001364730.1
Aligned Length:
1698
Identities:
447
Gaps:
1251

Alignment

Query    1  ATGCCCTGCTGTAGTCACAGGAGGTGTAGAGAGGACCCCGGGACATCTGAAAGCCAGGAAAT------------  62
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||            
Sbjct    1  ATGCCCTGCTGTAGTCACAGGAGGTGTAGAGAGGACCCCGGGACATCTGAAAGCCAGGAAATGGACCCAGTGGC  74

Query   63  ------------------------------GGAGGAGTGGGCTTTGCTGGATATTTCCCAGAGGAAACTCTACA  106
                                          ||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  CTTTGATGATGTTGCTGTGAACTTCACCCAGGAGGAGTGGGCTTTGCTGGATATTTCCCAGAGGAAACTCTACA  148

Query  107  AGGAAGTGATGCTGGAAACTTTCAGGAACCTGACCTCTGTAGGAAAAAGTTGGAAAGACCAGAACATTGAATAT  180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  AGGAAGTGATGCTGGAAACTTTCAGGAACCTGACCTCTGTAGGAAAAAGTTGGAAAGACCAGAACATTGAATAT  222

Query  181  GAGTACCAAAACCCCAGGAGAAACTTCAGGAGTCTCATAGAAAAGAAAGTCAATGAAATTAAAGATGACAGTCA  254
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GAGTACCAAAACCCCAGGAGAAACTTCAGGAGTCTCATAGAAAAGAAAGTCAATGAAATTAAAGATGACAGTCA  296

Query  255  TTGTGGAGAAACTTTTACCCAGGTTCCAGATGACAGGCTGAACTTCCAGGAGAAGAAAGCTTCTCCTGAAATAA  328
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  TTGTGGAGAAACTTTTACCCAGGTTCCAGATGACAGGCTGAACTTCCAGGAGAAGAAAGCTTCTCCTGAAATAA  370

Query  329  AATCATGTGACAGCTTTGTGTGTGGAGAAGTTGGCCTAGGTAACTCATCTTTTAATATGAACATCAGAGGTGAC  402
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  AATCATGTGACAGCTTTGTGTGTGGAGAAGTTGGCCTAGGTAACTCATCTTTTAATATGAACATCAGAGGTGAC  444

Query  403  ATTGGACACAAGGCCTATGAGTATCAGGAATATGGACCGAAGCCA-----------------------------  447
            |||||||||||||||||||||||||||||||||||||||||||||                             
Sbjct  445  ATTGGACACAAGGCCTATGAGTATCAGGAATATGGACCGAAGCCATGTAAGTGTCAACAACCTAAAAAAGCCTT  518

Query  448  --------------------------------------------------------------------------  447
                                                                                      
Sbjct  519  CAGATATCACCCCTCCTTTAGAACACCACAAAGGGATCACACTGGAGAGAAACCCTATGCTTGTAAAGAATGTG  592

Query  448  --------------------------------------------------------------------------  447
                                                                                      
Sbjct  593  GAAAAACTTTTATTTCCCATTCAAGCATTCAAAGACACGTGGTAATGCACAGTGGGGATGGACCTTATAAATGT  666

Query  448  --------------------------------------------------------------------------  447
                                                                                      
Sbjct  667  AAATTTTGTGGGAAAGCCTTCCATTGTCTCAGTTTATATCTTATCCATGAAAGAATTCACACTGGAGAGAAACC  740

Query  448  --------------------------------------------------------------------------  447
                                                                                      
Sbjct  741  ATATGAATGTAAACAATGTGGTAAATCCTTTAGTTATTCTGCTACCCTTCGAATACACGAAAGAACTCACACTG  814

Query  448  --------------------------------------------------------------------------  447
                                                                                      
Sbjct  815  GAGAAAAGCCTTATGAATGTCAGCAATGTGGGAAAGCATTTCATAGTCCCAGATGCTATCGTAGACATGAAAGG  888

Query  448  --------------------------------------------------------------------------  447
                                                                                      
Sbjct  889  ATTCACACGGGAGAGAAGGCTTATCAATGTAAGGAATGTGGAAAAGCATTCACGTGTCCCCAGTATGTTCGTAT  962

Query  448  --------------------------------------------------------------------------  447
                                                                                      
Sbjct  963  ACATGAAAGGACCCACTCTAGGAAAAAACCCTATGAATGTACGCAGTGTGGGAAAGCATTATCCTCTCTTACAA  1036

Query  448  --------------------------------------------------------------------------  447
                                                                                      
Sbjct 1037  GTTTTCAAACACACATAAGAATGCACTCTGGAGAAAGACCTTATGAATGTAAGATATGTGGGAAAGGCTTTTGT  1110

Query  448  --------------------------------------------------------------------------  447
                                                                                      
Sbjct 1111  TCTGCCAATTCATTTCAAAGACATGAAAAAACTCACAGTGGAGAGAAACCCTATAAATGCAAGCAATGTGGTAA  1184

Query  448  --------------------------------------------------------------------------  447
                                                                                      
Sbjct 1185  AGCCTTCATTCATTCCAGTTCCCTTCGTTATCATGAAAGGATTCACACTGGAGAGAAACCCTATGAGTGTAAGC  1258

Query  448  --------------------------------------------------------------------------  447
                                                                                      
Sbjct 1259  AATGTGGGAAGGCCTTCAGATCTTCCTCACACCTTCAATTGCATGGTAGGACTCACACTGGAGAGAAGCCCTAT  1332

Query  448  --------------------------------------------------------------------------  447
                                                                                      
Sbjct 1333  GAATGTCAGGAATGTGGGAAAGCCTTCAGATCTATGAAGAACCTTCAAAGTCATGAAAGGACACAAACACACGT  1406

Query  448  --------------------------------------------------------------------------  447
                                                                                      
Sbjct 1407  AAGAATACACTCTGGAGAAAGACCTTATAAATGTAAGCTATGTGGGAAAGGCTTTTATTGTCCCAAATCATTGC  1480

Query  448  --------------------------------------------------------------------------  447
                                                                                      
Sbjct 1481  AAAGACATGAAAAAACTCACACTGGAGAGAAACTCTATGAATGCAAGCAATGTGGTGAAGCCTTCAGTAGTTCC  1554

Query  448  --------------------------------------------------------------------------  447
                                                                                      
Sbjct 1555  AGTTCCTTTCGATACCATGAAAGGACTCACACTGGAGAGAAACCCTATAAATGCAAGCAATGTGGGAAAGCCTT  1628

Query  448  ----------------------------------------------------------------------  447
                                                                                  
Sbjct 1629  CAGAGCTGCCTCAGTCCTTCGAATGCATGGTAGGACTCACCCTGAAGATAAACCCTATGAGTGTAAGCAA  1698