Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_01804
Subject:
NM_001364731.1
Aligned Length:
1656
Identities:
447
Gaps:
1209

Alignment

Query    1  ATGCCCTGCTGTAGTCACAGGAGGTGTAGAGAGGACCCCGGGACATCTGAAAGCCAGGAAATGGAGGAGTGGGC  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGCCCTGCTGTAGTCACAGGAGGTGTAGAGAGGACCCCGGGACATCTGAAAGCCAGGAAATGGAGGAGTGGGC  74

Query   75  TTTGCTGGATATTTCCCAGAGGAAACTCTACAAGGAAGTGATGCTGGAAACTTTCAGGAACCTGACCTCTGTAG  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  TTTGCTGGATATTTCCCAGAGGAAACTCTACAAGGAAGTGATGCTGGAAACTTTCAGGAACCTGACCTCTGTAG  148

Query  149  GAAAAAGTTGGAAAGACCAGAACATTGAATATGAGTACCAAAACCCCAGGAGAAACTTCAGGAGTCTCATAGAA  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  GAAAAAGTTGGAAAGACCAGAACATTGAATATGAGTACCAAAACCCCAGGAGAAACTTCAGGAGTCTCATAGAA  222

Query  223  AAGAAAGTCAATGAAATTAAAGATGACAGTCATTGTGGAGAAACTTTTACCCAGGTTCCAGATGACAGGCTGAA  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  AAGAAAGTCAATGAAATTAAAGATGACAGTCATTGTGGAGAAACTTTTACCCAGGTTCCAGATGACAGGCTGAA  296

Query  297  CTTCCAGGAGAAGAAAGCTTCTCCTGAAATAAAATCATGTGACAGCTTTGTGTGTGGAGAAGTTGGCCTAGGTA  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  CTTCCAGGAGAAGAAAGCTTCTCCTGAAATAAAATCATGTGACAGCTTTGTGTGTGGAGAAGTTGGCCTAGGTA  370

Query  371  ACTCATCTTTTAATATGAACATCAGAGGTGACATTGGACACAAGGCCTATGAGTATCAGGAATATGGACCGAAG  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  ACTCATCTTTTAATATGAACATCAGAGGTGACATTGGACACAAGGCCTATGAGTATCAGGAATATGGACCGAAG  444

Query  445  CCA-----------------------------------------------------------------------  447
            |||                                                                       
Sbjct  445  CCATGTAAGTGTCAACAACCTAAAAAAGCCTTCAGATATCACCCCTCCTTTAGAACACCACAAAGGGATCACAC  518

Query  448  --------------------------------------------------------------------------  447
                                                                                      
Sbjct  519  TGGAGAGAAACCCTATGCTTGTAAAGAATGTGGAAAAACTTTTATTTCCCATTCAAGCATTCAAAGACACGTGG  592

Query  448  --------------------------------------------------------------------------  447
                                                                                      
Sbjct  593  TAATGCACAGTGGGGATGGACCTTATAAATGTAAATTTTGTGGGAAAGCCTTCCATTGTCTCAGTTTATATCTT  666

Query  448  --------------------------------------------------------------------------  447
                                                                                      
Sbjct  667  ATCCATGAAAGAATTCACACTGGAGAGAAACCATATGAATGTAAACAATGTGGTAAATCCTTTAGTTATTCTGC  740

Query  448  --------------------------------------------------------------------------  447
                                                                                      
Sbjct  741  TACCCTTCGAATACACGAAAGAACTCACACTGGAGAAAAGCCTTATGAATGTCAGCAATGTGGGAAAGCATTTC  814

Query  448  --------------------------------------------------------------------------  447
                                                                                      
Sbjct  815  ATAGTCCCAGATGCTATCGTAGACATGAAAGGATTCACACGGGAGAGAAGGCTTATCAATGTAAGGAATGTGGA  888

Query  448  --------------------------------------------------------------------------  447
                                                                                      
Sbjct  889  AAAGCATTCACGTGTCCCCAGTATGTTCGTATACATGAAAGGACCCACTCTAGGAAAAAACCCTATGAATGTAC  962

Query  448  --------------------------------------------------------------------------  447
                                                                                      
Sbjct  963  GCAGTGTGGGAAAGCATTATCCTCTCTTACAAGTTTTCAAACACACATAAGAATGCACTCTGGAGAAAGACCTT  1036

Query  448  --------------------------------------------------------------------------  447
                                                                                      
Sbjct 1037  ATGAATGTAAGATATGTGGGAAAGGCTTTTGTTCTGCCAATTCATTTCAAAGACATGAAAAAACTCACAGTGGA  1110

Query  448  --------------------------------------------------------------------------  447
                                                                                      
Sbjct 1111  GAGAAACCCTATAAATGCAAGCAATGTGGTAAAGCCTTCATTCATTCCAGTTCCCTTCGTTATCATGAAAGGAT  1184

Query  448  --------------------------------------------------------------------------  447
                                                                                      
Sbjct 1185  TCACACTGGAGAGAAACCCTATGAGTGTAAGCAATGTGGGAAGGCCTTCAGATCTTCCTCACACCTTCAATTGC  1258

Query  448  --------------------------------------------------------------------------  447
                                                                                      
Sbjct 1259  ATGGTAGGACTCACACTGGAGAGAAGCCCTATGAATGTCAGGAATGTGGGAAAGCCTTCAGATCTATGAAGAAC  1332

Query  448  --------------------------------------------------------------------------  447
                                                                                      
Sbjct 1333  CTTCAAAGTCATGAAAGGACACAAACACACGTAAGAATACACTCTGGAGAAAGACCTTATAAATGTAAGCTATG  1406

Query  448  --------------------------------------------------------------------------  447
                                                                                      
Sbjct 1407  TGGGAAAGGCTTTTATTGTCCCAAATCATTGCAAAGACATGAAAAAACTCACACTGGAGAGAAACTCTATGAAT  1480

Query  448  --------------------------------------------------------------------------  447
                                                                                      
Sbjct 1481  GCAAGCAATGTGGTGAAGCCTTCAGTAGTTCCAGTTCCTTTCGATACCATGAAAGGACTCACACTGGAGAGAAA  1554

Query  448  --------------------------------------------------------------------------  447
                                                                                      
Sbjct 1555  CCCTATAAATGCAAGCAATGTGGGAAAGCCTTCAGAGCTGCCTCAGTCCTTCGAATGCATGGTAGGACTCACCC  1628

Query  448  ----------------------------  447
                                        
Sbjct 1629  TGAAGATAAACCCTATGAGTGTAAGCAA  1656