Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_01821
Subject:
XM_005259215.4
Aligned Length:
2118
Identities:
1402
Gaps:
504

Alignment

Query    1  ATGACCACGTTGAAGGAGGCAGTGACCTTCAAGGACGTGGCTGTGGTCTTCACTGAGGAAGAGCTGAGGCTGCT  74
            ||||||||.||.|||||||||||||||||||||||.|||||||||||||||||||||||.||||||.|||||||
Sbjct    1  ATGACCACATTCAAGGAGGCAGTGACCTTCAAGGATGTGGCTGTGGTCTTCACTGAGGAGGAGCTGGGGCTGCT  74

Query   75  GGACCTTGCCCAGAGGAAACTGTACCGAGAAGTGATGCTGGAGAACTTCAGGAACCTGCTCTCAGTGGGGCATC  148
            |||||.||||||||||||.|||||||||||.|||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  GGACCCTGCCCAGAGGAAGCTGTACCGAGATGTGATGCTGGAGAACTTCAGGAACCTGCTCTCAGTGGGGCATC  148

Query  149  AATCACTCCACAGAGATACTTTCCACTTCCTAAAGGAAGAAAAGTTTTGGATGATGGAGACAGCAACCCAAAGA  222
            ||.|..|||||..||||||||.|||||||||||.|||||||||||||||||||||||.||||||||||||||||
Sbjct  149  AACCGTTCCACCAAGATACTTGCCACTTCCTAAGGGAAGAAAAGTTTTGGATGATGGGGACAGCAACCCAAAGA  222

Query  223  GAAGGGAATTTAGGAGGCAAGATCCAAATGGAGATGGAGACTGTTTCAGAATCAGGAACACATGAAGGCTTGTT  296
            ||||||||||.|||||||||||||||||..|||.|||||.|||||.|||||.|||||.|||||||||..|.||.
Sbjct  223  GAAGGGAATTCAGGAGGCAAGATCCAAACTGAGTTGGAGTCTGTTCCAGAAGCAGGAGCACATGAAGAGTGGTC  296

Query  297  CAGTCATCAAACCTGGGAACAAATTTCAAGTGACTTAACCAGGTTTCAAGACTCCATGGTAAACAGCTTTCAGT  370
            |.|.||.||||.|||||||||||||.|||..|||||||||||||.|||.|||||.||..||||.|.||.|||||
Sbjct  297  CTGCCAGCAAATCTGGGAACAAATTGCAAAAGACTTAACCAGGTCTCAGGACTCTATCATAAATAACTCTCAGT  370

Query  371  TCTCCAAACAAGATGATATGCCCTGCCAGGTTGATGCAGGACTATCTATAATTCACGTAAGACAGAAACCTTCT  444
            |||...||.|.|.||||.|.||||.|||||||||.|||||||||.|.|.||||||...|.|||||||||||||.
Sbjct  371  TCTTTGAAAATGGTGATGTCCCCTCCCAGGTTGAAGCAGGACTACCCACAATTCATACAGGACAGAAACCTTCC  444

Query  445  GAGGGTAGGACGTGTAAAAAGTCCTTTAGTGATGTCTCCGTCCTTGATCTTCATCAACAACTACAGTCAAGAGA  518
            .|||||.|||.|||||||.|||||.|.||||||||..||.||.|||||||||.|||.||..||.|.|||..|||
Sbjct  445  CAGGGTGGGAAGTGTAAACAGTCCATCAGTGATGTTCCCATCTTTGATCTTCCTCAGCAGTTATACTCAGAAGA  518

Query  519  GAAGTCTCATACATGTGATGAATGTGGAAAGAGTTTCTGTTATAGCTCAGCTCTTCGTATTCATCAGAGAGTTC  592
            |||||||.|||||||||||||.||||||||.||..|||||||.|.|||||||||||.|.|||||||||||||.|
Sbjct  519  GAAGTCTTATACATGTGATGAGTGTGGAAAAAGCATCTGTTACATCTCAGCTCTTCATGTTCATCAGAGAGTCC  592

Query  593  ACATGGGGGAGAAACTCTATAATTGTGATGTGTGTGGTAAGGAATTCAATCAGAGCTCACATCTGCAAATTCAT  666
            ||.||||.||||||||||.||..||||||||||||||.||||||||.|.|||.||||||||||||||||.||||
Sbjct  593  ACGTGGGAGAGAAACTCTTTATGTGTGATGTGTGTGGCAAGGAATTTAGTCAAAGCTCACATCTGCAAACTCAT  666

Query  667  CAGAGAATCCACACTGGAGAGAAACCATTCAAATGTGAGCAGTGTGGGAAAGGCTTTAGTCGTAGATCAGGACT  740
            ||||||.||||||||||||||||||||||||||||||||||.|||||||||||.||.|||||||||||||.|||
Sbjct  667  CAGAGAGTCCACACTGGAGAGAAACCATTCAAATGTGAGCAATGTGGGAAAGGTTTCAGTCGTAGATCAGCACT  740

Query  741  TTATGTTCATCGTAAATTACACACAGGAGTGAAACCTCATATTTGTGAGAAATGTGGGAAGGCCTTCATTCATG  814
            |.|||||||||||||||||||||||||||.|||||||.|.|||||||||..|||||||||||||||||||||||
Sbjct  741  TAATGTTCATCGTAAATTACACACAGGAGAGAAACCTTACATTTGTGAGGCATGTGGGAAGGCCTTCATTCATG  814

Query  815  ATTCCCAGCTTCAGGAACATCAAAGAATCCATACTGGGGAGAAGCCATTCAAATGTGATATATGTTGTAAGAGC  888
            |||||||||||.||||||||.|.||||||||||||||||||||.|||||||||||||||||||||.||||||.|
Sbjct  815  ATTCCCAGCTTAAGGAACATAAGAGAATCCATACTGGGGAGAAACCATTCAAATGTGATATATGTGGTAAGACC  888

Query  889  TTCCGTAGTAGAGCAAATCTTAATAGGCATTCCATGGTTCACATGCGAGAGAAACCATTCAGATGTGATACATG  962
            |||..|..|||..|||..|||||.||.||||||||||||||||...||||.||||||||.||.|||||||||||
Sbjct  889  TTCTATTTTAGGTCAAGACTTAAGAGCCATTCCATGGTTCACACAGGAGAAAAACCATTTAGGTGTGATACATG  962

Query  963  TGGTAAGAGCTTTGGTCTGAAATCAGCACTTAATAGTCATCGCATGGTCCACACAGGAGAGAAACGGTACAAAT  1036
            ||.||||||||||..||.||.|||||||||||||||.|||.||||||||||||||||||||||||.|||||.||
Sbjct  963  TGATAAGAGCTTTCATCAGAGATCAGCACTTAATAGGCATTGCATGGTCCACACAGGAGAGAAACCGTACAGAT  1036

Query 1037  GTGAGGAATGTGGAAAACGCTTCATTTATAGGCAAGATCTTTATAAGCATCAGATAGACCACACAGGGGAGAAG  1110
            |||||.|.|||||||||.||||.|||..|||||.||||.||||||||||||||.|.|.|||||||||.||.||.
Sbjct 1037  GTGAGCAGTGTGGAAAAGGCTTTATTGGTAGGCTAGATTTTTATAAGCATCAGGTGGTCCACACAGGAGAAAAA  1110

Query 1111  CCATATAATTGTAAAGAATGTGGAAAGAGCTTCAGATGGGCCTCAGGTCTTTCAAGACATGTGCGAGTCCACAG  1184
            |||||||||||||||||||||||.|||||||||||||||.|||||.|.||||..|..|||..||||||||||||
Sbjct 1111  CCATATAATTGTAAAGAATGTGGGAAGAGCTTCAGATGGTCCTCATGCCTTTTGAACCATCAGCGAGTCCACAG  1184

Query 1185  TGGAGAGACAACATTCAAATGTGAAGAATGTGGGAAGGGATTTTATACAAATTCACAACGTTATTCTCACCAGA  1258
            ||||||.|.||..||||||||||||||||||||.|||||||||||||||||||||||||..|.|||.||.||||
Sbjct 1185  TGGAGAAAAAAGCTTCAAATGTGAAGAATGTGGAAAGGGATTTTATACAAATTCACAACTGTCTTCCCATCAGA  1258

Query 1259  GAGCGCACAGTGGAGAAAAGCCATATAGATGTGAGGAGTGTGGGAAGGGCTACAAAAGGAGGTTGGATCTTGAC  1332
            ||.|.||||||||.|||||||||||||.||||||||||||||||||||||||           ||         
Sbjct 1259  GATCCCACAGTGGTGAAAAGCCATATAAATGTGAGGAGTGTGGGAAGGGCTA-----------TG---------  1312

Query 1333  TTTCATCAGAGGGTCCACAGAGGAGAGAAACCCTATAATTGTAAGGAATGTGGGAAGAGCTTTGGCTGGGCCTC  1406
                                                                                      
Sbjct 1313  --------------------------------------------------------------------------  1312

Query 1407  GTGTCTTTTGAATCATCAGAGAATCCACAGTGGAGAAAAACCATTTAAATGTGAAGAATGTGGGAAAAGATTTA  1480
                                                                                   |||
Sbjct 1313  -----------------------------------------------------------------------TTA  1315

Query 1481  CTCAGAATTCACAACTTTATACCCATCGTAGAGTCCACAGTGGAGAAAAACCATTCAAATGTGAAGAGTGTGGG  1554
            |                                                                         
Sbjct 1316  C-------------------------------------------------------------------------  1316

Query 1555  AAAAGATTTACTCAGAATTCACAACTTTATTCTCATCGCAGAGTCCACACTGGAGTAAAGCCATACAAATGTGA  1628
                                                                                      
Sbjct 1317  --------------------------------------------------------------------------  1316

Query 1629  AGAGTGTGGGAAGGGCTTCAACAGTAAGTTTAATCTTGACATGCACCAGAGGGTCCACACCGGAGAGAGACCTT  1702
                                    ||||||||||||||||.|||||||||||||||||||.|||||||||||||
Sbjct 1317  ------------------------TAAGTTTAATCTTGACTTGCACCAGAGGGTCCACACGGGAGAGAGACCTT  1366

Query 1703  ATAATTGTAAAGAATGTGGGAAGAGCTTTAGCCGGGCCTCAAGTATTTTGAATCATAAGAGACTCCATGGTGAT  1776
            ||||||||||.|||||||||||||.|||||||||||||||||||||||||||||||||||||||||        
Sbjct 1367  ATAATTGTAAGGAATGTGGGAAGAACTTTAGCCGGGCCTCAAGTATTTTGAATCATAAGAGACTCC--------  1432

Query 1777  GAAAAGCCATTCAAATGTGAAGAGTGTGGGAAGAGATTTACTGAGAATTCACAGCTTCATTCCCATCAGAGGGT  1850
                                                   ||||                   |||         
Sbjct 1433  ---------------------------------------ACTG-------------------CCA---------  1439

Query 1851  TCACACTGGGGAAAAGCCATACAAATGTGAGAAGTGTGGAAAGAGCTTCAGATGGGCCTCAACTCATCTAACCC  1924
                     |.||||.||||.||                                                   
Sbjct 1440  ---------GAAAAAACCATTCA---------------------------------------------------  1453

Query 1925  ATCAGAGACTCCACAGTAGAGAAAAACTACTTCAATGTGAGGACTGTGGGAAGAGCATTGTGCACAGTTCATGC  1998
                                             ||||||||||||||||.|||||..||||.|||||..|||.|
Sbjct 1454  ---------------------------------AATGTGAGGACTGTGGAAAGAGGCTTGTACACAGGACATAC  1494

Query 1999  CTTAAAGACCAACAAAGAGACCAAAGTGGAGAGAAAACATCTAAATGTGAGGACTGTGGGAAGCGCTACAAGAG  2072
            |.|||||||||.|..||||||.|.|||||.||.||..||||.|||||||||||.|||||||..|||||||||||
Sbjct 1495  CGTAAAGACCAGCCGAGAGACTATAGTGGGGAAAACCCATCCAAATGTGAGGATTGTGGGAGACGCTACAAGAG  1568

Query 2073  GCGCTTGAATCTTGATACGCTTTTGTCATTATTTTTAAATGACACA  2118
            ||||||||||||.||||..|||||.|||||||||.|||||||||||
Sbjct 1569  GCGCTTGAATCTGGATATACTTTTATCATTATTTCTAAATGACACA  1614

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