Construct: ORF ccsbBroadEn_01821

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF000708.1_s300c1, BRDN0000394892
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ZNF225 (7768)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 7768 ZNF225 zinc finger protein 225 NM_001321685.2 100% 100%
2 human 7768 ZNF225 zinc finger protein 225 NM_013362.4 100% 100%
3 human 7768 ZNF225 zinc finger protein 225 XM_011527285.2 100% 100%
4 human 7768 ZNF225 zinc finger protein 225 XM_011527286.2 100% 100%
5 human 7768 ZNF225 zinc finger protein 225 XM_005259223.3 88.2% 88.2% 0_1ins249
6 human 7767 ZNF224 zinc finger protein 224 NM_001321645.2 79.1% 71.4% (many diffs)
7 human 7767 ZNF224 zinc finger protein 224 NM_013398.4 79.1% 71.4% (many diffs)
8 human 7767 ZNF224 zinc finger protein 224 XM_017027261.2 79.1% 71.4% (many diffs)
9 human 342909 ZNF284 zinc finger protein 284 NM_001037813.4 73.7% 65.1% (many diffs)
10 human 342909 ZNF284 zinc finger protein 284 XM_011526907.3 73.7% 65.1% (many diffs)
11 human 342909 ZNF284 zinc finger protein 284 XM_011526908.3 73.7% 65.1% (many diffs)
12 human 342909 ZNF284 zinc finger protein 284 XM_024451486.1 73.7% 65.1% (many diffs)
13 human 7638 ZNF221 zinc finger protein 221 NM_001297588.1 70.7% 59.4% (many diffs)
14 human 7638 ZNF221 zinc finger protein 221 NM_001297589.1 70.7% 59.4% (many diffs)
15 human 7638 ZNF221 zinc finger protein 221 NM_013359.2 70.7% 59.4% (many diffs)
16 human 7638 ZNF221 zinc finger protein 221 XM_017027232.2 70.7% 59.4% (many diffs)
17 human 342909 ZNF284 zinc finger protein 284 XM_024451487.1 69.2% 60.9% (many diffs)
18 human 7638 ZNF221 zinc finger protein 221 XM_017027233.1 68.3% 56.8% (many diffs)
19 human 7711 ZNF155 zinc finger protein 155 NM_001260486.1 66.2% 58.6% (many diffs)
20 human 7711 ZNF155 zinc finger protein 155 NM_001260487.1 66.2% 58.6% (many diffs)
21 human 7711 ZNF155 zinc finger protein 155 NM_003445.3 66.2% 58.6% (many diffs)
22 human 7711 ZNF155 zinc finger protein 155 NM_198089.3 66.1% 58.4% (many diffs)
23 human 7711 ZNF155 zinc finger protein 155 XM_005259215.4 66.1% 58.4% (many diffs)
24 human 7711 ZNF155 zinc finger protein 155 NM_001260488.1 64.8% 57.1% (many diffs)
25 human 7711 ZNF155 zinc finger protein 155 XM_011527278.3 64.7% 57% (many diffs)
26 human 7711 ZNF155 zinc finger protein 155 XM_011527279.3 64.7% 57% (many diffs)
27 human 7711 ZNF155 zinc finger protein 155 XM_017027248.2 64.7% 57% (many diffs)
28 human 7711 ZNF155 zinc finger protein 155 XM_024451694.1 64.7% 57% (many diffs)
29 human 7773 ZNF230 zinc finger protein 230 NM_006300.4 57.5% 49.8% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
2187
ORF length:
2118
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaacttTG TACAAAAAAG
61TTGGCACCAT GACCACGTTG AAGGAGGCAG TGACCTTCAA GGACGTGGCT GTGGTCTTCA
121CTGAGGAAGA GCTGAGGCTG CTGGACCTTG CCCAGAGGAA ACTGTACCGA GAAGTGATGC
181TGGAGAACTT CAGGAACCTG CTCTCAGTGG GGCATCAATC ACTCCACAGA GATACTTTCC
241ACTTCCTAAA GGAAGAAAAG TTTTGGATGA TGGAGACAGC AACCCAAAGA GAAGGGAATT
301TAGGAGGCAA GATCCAAATG GAGATGGAGA CTGTTTCAGA ATCAGGAACA CATGAAGGCT
361TGTTCAGTCA TCAAACCTGG GAACAAATTT CAAGTGACTT AACCAGGTTT CAAGACTCCA
421TGGTAAACAG CTTTCAGTTC TCCAAACAAG ATGATATGCC CTGCCAGGTT GATGCAGGAC
481TATCTATAAT TCACGTAAGA CAGAAACCTT CTGAGGGTAG GACGTGTAAA AAGTCCTTTA
541GTGATGTCTC CGTCCTTGAT CTTCATCAAC AACTACAGTC AAGAGAGAAG TCTCATACAT
601GTGATGAATG TGGAAAGAGT TTCTGTTATA GCTCAGCTCT TCGTATTCAT CAGAGAGTTC
661ACATGGGGGA GAAACTCTAT AATTGTGATG TGTGTGGTAA GGAATTCAAT CAGAGCTCAC
721ATCTGCAAAT TCATCAGAGA ATCCACACTG GAGAGAAACC ATTCAAATGT GAGCAGTGTG
781GGAAAGGCTT TAGTCGTAGA TCAGGACTTT ATGTTCATCG TAAATTACAC ACAGGAGTGA
841AACCTCATAT TTGTGAGAAA TGTGGGAAGG CCTTCATTCA TGATTCCCAG CTTCAGGAAC
901ATCAAAGAAT CCATACTGGG GAGAAGCCAT TCAAATGTGA TATATGTTGT AAGAGCTTCC
961GTAGTAGAGC AAATCTTAAT AGGCATTCCA TGGTTCACAT GCGAGAGAAA CCATTCAGAT
1021GTGATACATG TGGTAAGAGC TTTGGTCTGA AATCAGCACT TAATAGTCAT CGCATGGTCC
1081ACACAGGAGA GAAACGGTAC AAATGTGAGG AATGTGGAAA ACGCTTCATT TATAGGCAAG
1141ATCTTTATAA GCATCAGATA GACCACACAG GGGAGAAGCC ATATAATTGT AAAGAATGTG
1201GAAAGAGCTT CAGATGGGCC TCAGGTCTTT CAAGACATGT GCGAGTCCAC AGTGGAGAGA
1261CAACATTCAA ATGTGAAGAA TGTGGGAAGG GATTTTATAC AAATTCACAA CGTTATTCTC
1321ACCAGAGAGC GCACAGTGGA GAAAAGCCAT ATAGATGTGA GGAGTGTGGG AAGGGCTACA
1381AAAGGAGGTT GGATCTTGAC TTTCATCAGA GGGTCCACAG AGGAGAGAAA CCCTATAATT
1441GTAAGGAATG TGGGAAGAGC TTTGGCTGGG CCTCGTGTCT TTTGAATCAT CAGAGAATCC
1501ACAGTGGAGA AAAACCATTT AAATGTGAAG AATGTGGGAA AAGATTTACT CAGAATTCAC
1561AACTTTATAC CCATCGTAGA GTCCACAGTG GAGAAAAACC ATTCAAATGT GAAGAGTGTG
1621GGAAAAGATT TACTCAGAAT TCACAACTTT ATTCTCATCG CAGAGTCCAC ACTGGAGTAA
1681AGCCATACAA ATGTGAAGAG TGTGGGAAGG GCTTCAACAG TAAGTTTAAT CTTGACATGC
1741ACCAGAGGGT CCACACCGGA GAGAGACCTT ATAATTGTAA AGAATGTGGG AAGAGCTTTA
1801GCCGGGCCTC AAGTATTTTG AATCATAAGA GACTCCATGG TGATGAAAAG CCATTCAAAT
1861GTGAAGAGTG TGGGAAGAGA TTTACTGAGA ATTCACAGCT TCATTCCCAT CAGAGGGTTC
1921ACACTGGGGA AAAGCCATAC AAATGTGAGA AGTGTGGAAA GAGCTTCAGA TGGGCCTCAA
1981CTCATCTAAC CCATCAGAGA CTCCACAGTA GAGAAAAACT ACTTCAATGT GAGGACTGTG
2041GGAAGAGCAT TGTGCACAGT TCATGCCTTA AAGACCAACA AAGAGACCAA AGTGGAGAGA
2101AAACATCTAA ATGTGAGGAC TGTGGGAAGC GCTACAAGAG GCGCTTGAAT CTTGATACGC
2161TTTTGTCATT ATTTTTAAAT GACACATTGC CAACTTTCTT GTACAAAGTt ggcattataa
2221gaaagcattg cttatcaatt tgttgcaacg aac

Download FASTA (ORF) (Full)