Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_02030
• Subject: NM_001351591.1
• Aligned Length: 1456
• Identities: 640
• Gaps: 809

Alignment

Query    1  ATGTCTGCTGAAGTCATCCATCAGGTTGAAGAAGCACTTGATACAGATGAGAAGGAGATGCTGCTCTTTTTGTG  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGTCTGCTGAAGTCATCCATCAGGTTGAAGAAGCACTTGATACAGATGAGAAGGAGATGCTGCTCTTTTTGTG  74

Query   75  CCGGGATGTTGCTATAGATGTGGTTCCACCTAATGTCAGGGACCTTCTGGATATTTTACGGGAAAGAGGTAAGC  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  CCGGGATGTTGCTATAGATGTGGTTCCACCTAATGTCAGGGACCTTCTGGATATTTTACGGGAAAGAGGTAAGC  148

Query  149  TGTCTGTCGGGGACTTGGCTGAACTGCTCTACAGAGTGAGGCGATTTGACCTGCTCAAACGTATCTTGAAGATG  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  TGTCTGTCGGGGACTTGGCTGAACTGCTCTACAGAGTGAGGCGATTTGACCTGCTCAAACGTATCTTGAAGATG  222

Query  223  GACAGAAAAGCTGTGGAGACCCACCTGCTCAGGAACCCTCACCTTGTTTCGGACTATAGAGTGCTGATGGCAGA  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GACAGAAAAGCTGTGGAGACCCACCTGCTCAGGAACCCTCACCTTGTTTCGGACTATAGAGTGCTGATGGCAGA  296

Query  297  GATTGGTGAGGATTTGGATAAATCTGATGTGTCCTCATTAATTTTCCTCATGAAGGATTACATGGGCCGAGGCA  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GATTGGTGAGGATTTGGATAAATCTGATGTGTCCTCATTAATTTTCCTCATGAAGGATTACATGGGCCGAGGCA  370

Query  371  AGATAAGCAAGGAGAAGAGTTTCTTGGACCTTGTGGTTGAGTTGGAGAAACTAAATCTGGTTGCCCCAGATCAA  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  AGATAAGCAAGGAGAAGAGTTTCTTGGACCTTGTGGTTGAGTTGGAGAAACTAAATCTGGTTGCCCCAGATCAA  444

Query  445  CTGGATTTATTAGAAAAATGCCTAAAGAACATCCACAGAATAGACCTGAAGACAAAAATCCAGAAGTACAAGCA  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  CTGGATTTATTAGAAAAATGCCTAAAGAACATCCACAGAATAGACCTGAAGACAAAAATCCAGAAGTACAAGCA  518

Query  519  GTCTGTTCAAGGAGCAGGGACAAGTTACAGGAATGTTCTCCAAGCAGCAATCCAAAAGAGTCTCAAGGATCCTT  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  GTCTGTTCAAGGAGCAGGGACAAGTTACAGGAATGTTCTCCAAGCAGCAATCCAAAAGAGTCTCAAGGATCCTT  592

Query  593  CAAATAACTTCAGGCTCCATAATGGGAGAAGTAAAGAACA----AAGACTTAAGGAACAGCTTGGCGCTCAACA  662
            ||||||||||||||       |||          |.||||    |.|.|        ||  |||.| ||.|.| 
Sbjct  593  CAAATAACTTCAGG-------ATG----------ATAACACCCTATGCC--------CA--TTGTC-CTGATC-  637

Query  663  AGAACCAGTGAA--------GAAA----TCCATTCAGGAATCAGAAGCTTTTTTGCCTCAGAGCATACCTGAAG  724
                    ||||        ||||    |||||.                                        
Sbjct  638  --------TGAAAATTCTTGGAAATTGTTCCATG----------------------------------------  663

Query  725  AGAGATACAAGATGAAGAGCAAGCCCCTAGGAATCTGCCTGATAATCGATTGCATTGGCAATGAGACAGAGCTT  798
                                                                                      
Sbjct  664  --------------------------------------------------------------------------  663

Query  799  CTTCGAGACACCTTCACTTCCCTGGGCTATGAAGTCCAGAAATTCTTGCATCTCAGTATGCATGGTATATCCCA  872
                                                                                      
Sbjct  664  --------------------------------------------------------------------------  663

Query  873  GATTCTTGGCCAATTTGCCTGTATGCCCGAGCACCGAGACTACGACAGCTTTGTGTGTGTCCTGGTGAGCCGAG  946
                                                                                      
Sbjct  664  --------------------------------------------------------------------------  663

Query  947  GAGGCTCCCAGAGTGTGTATGGTGTGGATCAGACTCACTCAGGGCTCCCCCTGCATCACATCAGGAGGATGTTC  1020
                                                                                      
Sbjct  664  --------------------------------------------------------------------------  663

Query 1021  ATGGGAGATTCATGCCCTTATCTAGCAGGGAAGCCAAAGATGTTTTTTATTCAGAACTATGTGGTGTCAGAGGG  1094
                                                                                      
Sbjct  664  --------------------------------------------------------------------------  663

Query 1095  CCAGCTGGAGGACAGCAGCCTCTTGGAGGTGGATGGGCCAGCGATGAAGAATGTGGAATTCAAGGCTCAGAAGC  1168
                                                                                      
Sbjct  664  --------------------------------------------------------------------------  663

Query 1169  GAGGGCTGTGCACAGTTCACCGAGAAGCTGACTTCTTCTGGAGCCTGTGTACTGCGGACATGTCCCTGCTGGAG  1242
                                                                                      
Sbjct  664  --------------------------------------------------------------------------  663

Query 1243  CAGTCTCACAGCTCACCATCCCTGTACCTGCAGTGCCTCTCCCAGAAACTGAGACAAGAAAGAAAACGCCCACT  1316
                                                                                      
Sbjct  664  --------------------------------------------------------------------------  663

Query 1317  CCTGGATCTTCACATTGAACTCAATGGCTACATGTATGATTGGAACAGCAGAGTTTCTGCCAAGGAGAAATATT  1390
                                                                                      
Sbjct  664  --------------------------------------------------------------------------  663

Query 1391  ATGTCTGGCTGCAGCACACTCTGAGAAAGAAACTTATCCTCTCCTACACA  1440
                                                              
Sbjct  664  --------------------------------------------------  663