Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_02030
- Subject:
- NR_147241.1
- Aligned Length:
- 1658
- Identities:
- 627
- Gaps:
- 946
Alignment
Query 1 -----------------------ATGTCTGCTGAAGTCATCCA--TCAGGTTGAAGAAGCACTTGATA--CAG- 46
.|||| |.|||||| .|.|||| |||..||| |||
Sbjct 1 TTTACTCCTAACGCGTGGAACTTGTGTC-------GACATCCACCCCCGGTT--------ACTGCATACTCAGT 59
Query 47 ----------ATGAGAAGGAGATGCTGCTCTTTTTGTGCCGGGATGTTGC-----TATAGATGTGGTTC-CACC 104
|| ||.||||.| |.|.||..|||| .|..||.|.| || ||.|
Sbjct 60 CACACAAGCCAT-AGCAGGAAA----------------CAGCGAGCTTGCAGCCTCACCGACGAG--TCTCAAC 114
Query 105 TAATGTCAGGGACCTTCTGGATATTTTACGGGAAAGAGGTAAGCTGTCTGTCGGGGACTTGGCTGAACTGCTCT 178
||| .||||| ||.|.||| |..||.||| |||||||.||| |||
Sbjct 115 TAA---AAGGGA-CTCCCGGA----------GCTAGGGGT------------GGGGACTCGGC-------CTC- 154
Query 179 ACAGAGTGA-----GGCGATTTGAC-------------CTGCTCAAACGTATCTTGAAGATGGAC----AGAAA 230
|||.||||| |||.|||.||| |.|||.|.|| ||.|.|||| .||..
Sbjct 155 ACACAGTGAGTGCCGGCTATTGGACTTTTGTCCAGTGACAGCTGAGAC--------AACAAGGACCACGGGAGG 220
Query 231 AGCTGT-GGAGA----------------------CCCA---------CCTGCT--CAGGAAC------------ 258
||.||| ||||| |||| || ||| |||| |
Sbjct 221 AGGTGTAGGAGAGAAGCGCCGCGAACAGCGATCGCCCAGCACCAAGTCC-GCTTCCAGG--CTTTCGGTTTCTT 291
Query 259 --CCT-CACCTTG-------TTTC-------------------------------------------------- 272
||| ||.|||| .|||
Sbjct 292 TGCCTCCATCTTGGGTGCGCCTTCCCGGCGTCTAGGGGAGCGAAGGCTGAGGTGGCAGCGGCAGGAGAGTCCGG 365
Query 273 --------GGACTATAGAGTGCTGATGGCAGAGATTGGTGAGGATTTGGATAAATCTGATGTGTCCTCATTAAT 338
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 366 CCGCGACAGGAC----GAGTGCTGATGGCAGAGATTGGTGAGGATTTGGATAAATCTGATGTGTCCTCATTAAT 435
Query 339 TTTCCTCATGAAGGATTACATGGGCCGAGGCAAGATAAGCAAGGAGAAGAGTTTCTTGGACCTTGTGGTTGAGT 412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 436 TTTCCTCATGAAGGATTACATGGGCCGAGGCAAGATAAGCAAGGAGAAGAGTTTCTTGGACCTTGTGGTTGAGT 509
Query 413 TGGAGAAACTAAATCTGGTTGCCCCAGATCAACTGGATTTATTAGAAAAATGCCTAAAGAACATCCACAGAATA 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 510 TGGAGAAACTAAATCTGGTTGCCCCAGATCAACTGGATTTATTAGAAAAATGCCTAAAGAACATCCACAGAATA 583
Query 487 GACCTGAAGACAAAAATCCAGAAGTACAAGCAGTCTGTTCAAGGAGCAGGGACAAGTTACAGGAATGTTCTCCA 560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 584 GACCTGAAGACAAAAATCCAGAAGTACAAGCAGTCTGTTCAAGGAGCAGGGACAAGTTACAGGAATGTTCTCCA 657
Query 561 AGCAGCAATCCAAAAGAGTCTCAAGGATCCTTCAAATAACTTCAGGCTCCATAATGGGAGAAGTAAAGAACA-- 632
|||||||||||||||||||||||||||||||||||||||||||||| ||| |.||||
Sbjct 658 AGCAGCAATCCAAAAGAGTCTCAAGGATCCTTCAAATAACTTCAGG-------ATG----------ATAACACC 714
Query 633 --AAGACTTAAGGAACAGCTTGGCGCTCAACAAGAACCAGTGAA--------GAAA----TCCAT-TCAGGAAT 691
|.|.| || |||.| ||.|.| |||| |||| ||||| |.|..||
Sbjct 715 CTATGCC--------CA--TTGTC-CTGATC---------TGAAAATTCTTGGAAATTGTTCCATGTGATTAA- 767
Query 692 CA--GAAGCTTTTTTGCCTCAGAGCATACCTGAAGAGAGATACAAGATGAAGAGCAAGCCCCTAGGAATCTGCC 763
|| ||| .|||||| |||.| ||.| |.||||..
Sbjct 768 CATGGAA------CTGCCTC------TACTT------------------------AATC-------ATTCTGAA 798
Query 764 TGAT--AATCGATTGCATTGGC--AATG----AGACAGAGCTTCTTCGAGACACCTTCACTTCCCTG-GGCTAT 828
|||| ||||| ||.||||..| |||| |.|..|.|.|| || |.|||.|.|| .|||.|
Sbjct 799 TGATTAAATCG-TTTCATTTTCTAAATGTGTTATAATGTGTTT-----AG-------CCCTTTCTTGTTGCTGT 859
Query 829 GAAGTCCAGAAATTCTTGC--ATCT--------CAGTATGCATGGTATATCCCAGATTCTTGGCCAATTTGCCT 892
|.||..|| ||.|||.| |||| .|.||...|||.|||| |.|| .|||.|.|.|
Sbjct 860 -ATGTTTAG--ATGCTTTCCAATCTTTTGTTACTACTAATAATGCTATA----AAAT-------AAATATCCTT 919
Query 893 GTATGCCCGAGCACCGAGACTACGACAGCTTTGTGTGTGTCCTGGTGAGCCGAGGAGGCTCCCAGAGTGTGTAT 966
|| ||..|||||
Sbjct 920 GT----------------------ACTTCTTTG----------------------------------------- 930
Query 967 GGTGTGGATCAGACTCACTCAGGGCTCCCCCTGCATCACATCAGGAGGATGTTCATGGGAGATTCATGCCCTTA 1040
Sbjct 931 -------------------------------------------------------------------------- 930
Query 1041 TCTAGCAGGGAAGCCAAAGATGTTTTTTATTCAGAACTATGTGGTGTCAGAGGGCCAGCTGGAGGACAGCAGCC 1114
Sbjct 931 -------------------------------------------------------------------------- 930
Query 1115 TCTTGGAGGTGGATGGGCCAGCGATGAAGAATGTGGAATTCAAGGCTCAGAAGCGAGGGCTGTGCACAGTTCAC 1188
Sbjct 931 -------------------------------------------------------------------------- 930
Query 1189 CGAGAAGCTGACTTCTTCTGGAGCCTGTGTACTGCGGACATGTCCCTGCTGGAGCAGTCTCACAGCTCACCATC 1262
Sbjct 931 -------------------------------------------------------------------------- 930
Query 1263 CCTGTACCTGCAGTGCCTCTCCCAGAAACTGAGACAAGAAAGAAAACGCCCACTCCTGGATCTTCACATTGAAC 1336
Sbjct 931 -------------------------------------------------------------------------- 930
Query 1337 TCAATGGCTACATGTATGATTGGAACAGCAGAGTTTCTGCCAAGGAGAAATATTATGTCTGGCTGCAGCACACT 1410
Sbjct 931 -------------------------------------------------------------------------- 930
Query 1411 CTGAGAAAGAAACTTATCCTCTCCTACACA 1440
Sbjct 931 ------------------------------ 930
