Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_02125
- Subject:
- NM_001114087.2
- Aligned Length:
- 1385
- Identities:
- 567
- Gaps:
- 733
Alignment
Query 1 ATGGATTCCTTCAAAGTAGTGCTGGAGGGGCCAGCACCTTGGGGCTTCCGGCTGCAAGGGGGCAAGGACTTCAA 74
||||||||||||||.||.||||||||.||||||||.||||||||||||||.|||||||||||||||||||||||
Sbjct 1 ATGGATTCCTTCAAGGTGGTGCTGGAAGGGCCAGCCCCTTGGGGCTTCCGTCTGCAAGGGGGCAAGGACTTCAA 74
Query 75 TGTGCCCCTCTCCATTTCCCGGCTCACTCCTGGGGGCAAAGCGGCGCAGGCCGGAGTGGCCGTGGGTGACTGGG 148
||||||||||||.||.||.||||||||.||.||.||||||||.||.||||||||.|||||.|||||.|||||||
Sbjct 75 TGTGCCCCTCTCTATCTCTCGGCTCACGCCCGGAGGCAAAGCTGCACAGGCCGGTGTGGCTGTGGGAGACTGGG 148
Query 149 TGCTGAGCATCGATGGCGAGAATGCGGGTAGCCTCACACACATCGAAGCTCAGAACAAGATCCGGGCCTGCGGG 222
|.||||..||.||.||.|||||.|||||.||||||||.|||||||||||.||||||||||||||.|||||.|||
Sbjct 149 TACTGAATATTGACGGTGAGAACGCGGGCAGCCTCACGCACATCGAAGCCCAGAACAAGATCCGCGCCTGTGGG 222
Query 223 GAGCGCCTCAGCCTGGGCCTCAGCAGGGCCCAGCCGGTTCAGAGCAAACCGCAGAAGGCCTCCG-CCCCCGCCG 295
|||||||||||||||||.||.|||||.||||||||.||||||||||||||.||||||||| |.| ||||..|||
Sbjct 223 GAGCGCCTCAGCCTGGGTCTTAGCAGAGCCCAGCCTGTTCAGAGCAAACCACAGAAGGCC-CTGACCCCTCCCG 295
Query 296 CGGACCCTCCGCGGTACACCTTTGCACCCAGCGTCTCCCTCAACAAGACGGCCCGGCCCTTTGGGGCGCCCCCG 369
|.|||||.|||.|||||||.||||||||.||||.|||||||||||||||||||||||||||.|||||.|||||.
Sbjct 296 CCGACCCCCCGAGGTACACTTTTGCACCAAGCGCCTCCCTCAACAAGACGGCCCGGCCCTTCGGGGCACCCCCA 369
Query 370 CCCGCTGACAGCGCCCCGCAGCAGAATGGACAGCCGCTCCGACCGCTGGTCCCAGATGCCAGCAAGCAGCGGCT 443
||..||||||||.|||.||.|||||||||||||..||||.|||.||.||||||.||||||||||||||||||||
Sbjct 370 CCTACTGACAGCACCCTGCGGCAGAATGGACAGTTGCTCAGACAGCCGGTCCCCGATGCCAGCAAGCAGCGGCT 443
Query 444 GATGGAGAACACAGAGGACTGGCGGCCGCGGCCGGGGACAGGCCAGTCGCGTTCCTTCCGCATCCTTGCCCACC 517
|||||||.|.||.||.||||||||||||||||||||||||||||||||.||.||||||||||||||||||||||
Sbjct 444 GATGGAGGATACCGAAGACTGGCGGCCGCGGCCGGGGACAGGCCAGTCCCGCTCCTTCCGCATCCTTGCCCACC 517
Query 518 TCACAGGCACCGAGTTCATGCAAGACCCGGATGAGGAGCACCTGAAGAAATCAAGCCAGG-------TGCCCAG 584
||||.|||||.||||||||||||||||||||||||||...|.|||||||.||||| || ||.||.|
Sbjct 518 TCACGGGCACAGAGTTCATGCAAGACCCGGATGAGGAATTCATGAAGAAGTCAAG---GGAAAAGTATGTCCTG 588
Query 585 G----ACAGAAGCCCCAGCCCCAGCCTCATCTACACCCCAGGAGCCCTGGCCTGGCCCTACCGCCCCCAGCCCT 654
| |||| |||||..|| |.||||| |...||.||.|||||.|.|||
Sbjct 589 GAGCTACAG-AGCCCACGC----------TATACAC-----GTCTCCGGGACTGGCACCACC------------ 634
Query 655 ACCAGCCGCCCGCCCTGGGCTGTGGACCCTGCGTTTGCCGAGCGCTATGCCCCGGACAAAACGAGCACA--GTG 726
||||||.||||| |||.||.|| |||
Sbjct 635 ----------------------------------------AGCGCTCTGCCC--------ACGTGCTCAACGTG 660
Query 727 CTGACCCGGCACAGCCAGCCGGCCACGCCCACGCCGCTGCAGAGCCGCACCTCCATTGTGCAGGCAGCTGCCGG 800
|||.||
Sbjct 661 -----------CAGTCA--------------------------------------------------------- 666
Query 801 AGGGGTGCCAGGAGGGGGCAGCAACAACGGCAAGACTCCCGTGTGTCACCAGTGCCACAAGGTCATCCGGGGCC 874
Sbjct 667 -------------------------------------------------------------------------- 666
Query 875 GCTACCTGGTGGCGCTGGGCCACGCGTACCACCCGGAGGAGTTTGTGTGTAGCCAGTGTGGGAAGGTCCTGGAA 948
Sbjct 667 -------------------------------------------------------------------------- 666
Query 949 GAGGGTGGCTTCTTTGAGGAGAAGGGCGCCATCTTCTGCCCACCATGCTATGACGTGCGCTATGCACCCAGCTG 1022
Sbjct 667 -------------------------------------------------------------------------- 666
Query 1023 TGCCAAGTGCAAGAAGAAGATTACAGGCGAGATCATGCACGCCCTGAAGATGACCTGGCACGTGCACTGCTTTA 1096
Sbjct 667 -------------------------------------------------------------------------- 666
Query 1097 CCTGTGCTGCCTGCAAGACGCCCATCCGGAACAGGGCCTTCTACATGGAGGAGGGCGTGCCCTATTGCGAGCGA 1170
Sbjct 667 -------------------------------------------------------------------------- 666
Query 1171 GACTATGAGAAGATGTTTGGCACGAAATGCCATGGCTGTGACTTCAAGATCGACGCTGGGGACCGCTTCCTGGA 1244
Sbjct 667 -------------------------------------------------------------------------- 666
Query 1245 GGCCCTGGGCTTCAGCTGGCATGACACCTGCTTCGTCTGTGCGATATGTCAGATCAACCTGGAAGGAAAGACCT 1318
Sbjct 667 -------------------------------------------------------------------------- 666
Query 1319 TCTACTCCAAGAAGGACAGGCCTCTCTGCAAGAGCCATGCCTTCTCTCATGTG 1371
Sbjct 667 ----------------------------------------------------- 666