Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_02227
Subject:
NM_001195555.2
Aligned Length:
1929
Identities:
1875
Gaps:
54

Alignment

Query    1  ATGTTGAACATGTGGAAGGTGCGCGAGCTGGTGGACAAAGCCACCAATGTTGTTATGAATTATTCAGAGATCGA  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGTTGAACATGTGGAAGGTGCGCGAGCTGGTGGACAAAGCCACCAATGTTGTTATGAATTATTCAGAGATCGA  74

Query   75  GTCTAAGGTTCGAGAGGCAACGAACGATGATCCTTGGGGACCTTCTGGGCAACTCATGGGAGAGATTGCCAAGG  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  GTCTAAGGTTCGAGAGGCAACGAACGATGATCCTTGGGGACCTTCTGGGCAACTCATGGGAGAGATTGCCAAGG  148

Query  149  CTACATTTATGTATGAACAATTTCCAGAACTTATGAACATGCTTTGGTCACGAATGTTAAAAGACAACAAAAAG  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  CTACATTTATGTATGAACAATTTCCAGAACTTATGAACATGCTTTGGTCACGAATGTTAAAAGACAACAAAAAG  222

Query  223  AATTGGAGAAGAGTTTATAAGTCGTTGCTGCTCCTAGCTTACCTCATAAGGAATGGATCAGAGCGTGTTGTTAC  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  AATTGGAGAAGAGTTTATAAGTCGTTGCTGCTCCTAGCTTACCTCATAAGGAATGGATCAGAGCGTGTTGTTAC  296

Query  297  AAGTGCCAGAGAACACATTTATGATTTACGATCCCTGGAAAATTACCACTTTGTAGATGAGCATGGTAAGGATC  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  AAGTGCCAGAGAACACATTTATGATTTACGATCCCTGGAAAATTACCACTTTGTAGATGAGCATGGTAAGGATC  370

Query  371  AAGGTATAAATATTCGACAGAAGGTGAAGGAATTGGTTGAATTTGCCCAGGATGACGACAGGCTTCGTGAAGAG  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  AAGGTATAAATATTCGACAGAAGGTGAAGGAATTGGTTGAATTTGCCCAGGATGACGACAGGCTTCGTGAAGAG  444

Query  445  CGAAAGAAAGCAAAGAAGAACAAAGACAAGTATGTTGGGGTTTCCTCAGACAGTGTTGGAGGATTCAGATACAG  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  CGAAAGAAAGCAAAGAAGAACAAAGACAAGTATGTTGGGGTTTCCTCAGACAGTGTTGGAGGATTCAGATACAG  518

Query  519  TGAAAGATATGATCCTGAGCCCAAATCAAAATGGGATGAGGAGTGGGATAAAAACAAGAGTGCTTTTCCATTCA  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  TGAAAGATATGATCCTGAGCCCAAATCAAAATGGGATGAGGAGTGGGATAAAAACAAGAGTGCTTTTCCATTCA  592

Query  593  GTGATAAATTAGGTGAGCTGAGTGATAAAATTGGAAGCACAATTGATGACACCATCAGCAAGTTCCGGAGGAAA  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  GTGATAAATTAGGTGAGCTGAGTGATAAAATTGGAAGCACAATTGATGACACCATCAGCAAGTTCCGGAGGAAA  666

Query  667  GATAGAGAAGACTCTCCAGAAAGATGCAGCGACAGCGATGAGGAAAAGAAAGCGAGAAGAGGCAGATCTCCCAA  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  GATAGAGAAGACTCTCCAGAAAGATGCAGCGACAGCGATGAGGAAAAGAAAGCGAGAAGAGGCAGATCTCCCAA  740

Query  741  AGGTGAATTCAAAGATGAAGAGGAGACTGTGACGACAAAGCATATTCATATCACACAGGCCACAGAGACCACCA  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  AGGTGAATTCAAAGATGAAGAGGAGACTGTGACGACAAAGCATATTCATATCACACAGGCCACAGAGACCACCA  814

Query  815  CAACCAGACACAAGCGCACAGCAAATCCTTCCAAAACCATTGATCTTGGAGCAGCAGCACATTACACAGGGGAC  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  CAACCAGACACAAGCGCACAGCAAATCCTTCCAAAACCATTGATCTTGGAGCAGCAGCACATTACACAGGGGAC  888

Query  889  AAAGCAAGTCCAGATCAGAATGCTTCAACCCACACACCTCAGTCTTCAGTTAAGACTTCAGTGCCTAGCAGCAA  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  AAAGCAAGTCCAGATCAGAATGCTTCAACCCACACACCTCAGTCTTCAGTTAAGACTTCAGTGCCTAGCAGCAA  962

Query  963  GTCATCTGGTGACCTTGTTGATCTGTTTGATGGCACCAGCCAGTCAACAGGAGGATCAGCTGATTTATTCGGAG  1036
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  GTCATCTGGTGACCTTGTTGATCTGTTTGATGGCACCAGCCAGTCAACAGGAGGATCAGCTGATTTATTCGGAG  1036

Query 1037  GATTTGCTGACTTTGGCTCAGCTGCTGCATCAGGCAGTTTCCCTTCCCAAGTAACAGCAACAAGTGGGAATGGA  1110
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  GATTTGCTGACTTTGGCTCAGCTGCTGCATCAGGCAGTTTCCCTTCCCAAGTAACAGCAACAAGTGGGAATGGA  1110

Query 1111  GACTTTGGTGACTGGAGTGCCTTCAACCAAGCCCCATCAGGCCCTGTTGCTTCCAGTGGCGAGTTCTTTGGCAG  1184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  GACTTTGGTGACTGGAGTGCCTTCAACCAAGCCCCATCAGGCCCTGTTGCTTCCAGTGGCGAGTTCTTTGGCAG  1184

Query 1185  TGCCTCACAGCCAGCGGTAGAACTTGTTAGTGGCTCACAATCAGCTCTAGGCCCACCTCCTGCTGCCTCAAATT  1258
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  TGCCTCACAGCCAGCGGTAGAACTTGTTAGTGGCTCACAATCAGCTCTAGGCCCACCTCCTGCTGCCTCAAATT  1258

Query 1259  CTTCAGACCTGTTTGATCTTATGGGCTCGTCCCAGGCAACCATGACATCTTCCCAGAGTATGAATTTCTCTATG  1332
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  CTTCAGACCTGTTTGATCTTATGGGCTCGTCCCAGGCAACCATGACATCTTCCCAGAGTATGAATTTCTCTATG  1332

Query 1333  ATGAGCACTAACACTGTGGGACTTGGTTTGCCTATGTCAAGATCA-----------------------------  1377
            |||||||||||||||||||||||||||||||||||||||||||||                             
Sbjct 1333  ATGAGCACTAACACTGTGGGACTTGGTTTGCCTATGTCAAGATCACAGCCTTTGCAAAATGTTAGCACAGTGCT  1406

Query 1378  -------------------------CAGAATACAGATATGGTCCAGAAATCAGTCAGCAAAACCTTGCCCTCTA  1426
                                     |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  GCAGAAGCCTAATCCTCTCTATAATCAGAATACAGATATGGTCCAGAAATCAGTCAGCAAAACCTTGCCCTCTA  1480

Query 1427  CTTGGTCTGACCCCAGTGTAAACATCAGCCTAGACAACTTACTACCTGGTATGCAGCCTTCCAAACCCCAGCAG  1500
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  CTTGGTCTGACCCCAGTGTAAACATCAGCCTAGACAACTTACTACCTGGTATGCAGCCTTCCAAACCCCAGCAG  1554

Query 1501  CCATCACTGAATACAATGATTCAGCAACAGAATATGCAGCAGCCTATGAATGTGATGACTCAAAGTTTTGGAGC  1574
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  CCATCACTGAATACAATGATTCAGCAACAGAATATGCAGCAGCCTATGAATGTGATGACTCAAAGTTTTGGAGC  1628

Query 1575  TGTGAACCTCAGTTCTCCATCGAACATGCTTCCTGTCCGGCCCCAAACTAATGCTTTGATAGGGGGACCCATGC  1648
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  TGTGAACCTCAGTTCTCCATCGAACATGCTTCCTGTCCGGCCCCAAACTAATGCTTTGATAGGGGGACCCATGC  1702

Query 1649  CTATGAGCATGCCCAATGTGATGACTGGCACCATGGGAATGGCCCCTCTTGGAAATACTCCGATGATGAACCAG  1722
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703  CTATGAGCATGCCCAATGTGATGACTGGCACCATGGGAATGGCCCCTCTTGGAAATACTCCGATGATGAACCAG  1776

Query 1723  AGCATGATGGGCATGAACATGAACATAGGGATGTCCGCTGCTGGGATGGGCTTGACAGGCACAATGGGAATGGG  1796
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777  AGCATGATGGGCATGAACATGAACATAGGGATGTCCGCTGCTGGGATGGGCTTGACAGGCACAATGGGAATGGG  1850

Query 1797  CATGCCCAACATAGCCATGACTTCTGGAACTGTGCAACCCAAGCAAGATGCCTTTGCAAATTTCGCCAATTTTA  1870
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851  CATGCCCAACATAGCCATGACTTCTGGAACTGTGCAACCCAAGCAAGATGCCTTTGCAAATTTCGCCAATTTTA  1924

Query 1871  GCAAA  1875
            |||||
Sbjct 1925  GCAAA  1929

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