Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_02255
- Subject:
- XM_006526340.3
- Aligned Length:
- 2493
- Identities:
- 1618
- Gaps:
- 690
Alignment
Query 1 ATGTCCAAGAAAGGGCGAAATAAGGGCGAGAAGCCCGAGGCACTCATTGTTGCCCTTCAAGCTGCCAATGAAGA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 CCTCAGGACCAAGCTCACAGACATTCAGATAGAGCTGCATCAAGAGAAGTCCAAGGTATCAAAGCTTGAAAGAG 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 AGAAGACTCAAGAAGCGAAGAGGATTCGTGAGCTGGAGCAGCGCAAGCACACGGTGCTGGTGACAGAACTCAAA 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 GCCAAGCTCCATGAGGAGAAGATGAAGGAGCTGCAGGCTGTGAGGGAGAACCTTATCAAGCAGCACGAGCAGGA 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 AATGTCAAGGACGGTGAAGGTACGTGATGGAGAGATCCAGAGGCTCAAGTCTGCTCTCTGTGCTCTCCGCGACG 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 GCAGCAGTGACAAAGTAAGGACAGCGCTCACCATTGAGGCCCGGGAGGAGGCCCGGAAACTGTTTGACACAGAG 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 CGCCTTAAGCTCTTACAGGAAATTGCGGACCTGAAAACGGCCAAGAAGCAGGTGGACGAGGCTCTGAGCAATAT 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 GATCCAAGCAGATAAAATCAAGGCTGGGGACCTTCGGAGTGAGCATCAGTCCCACCAAGAAGCCATCTCGAAGA 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 TCAAGTGGGAGTCGGAGCGGGATATTCGGAGGCTGATGGATGAAATCAAAGCCAAGGACAGGATCATCTTTTCC 666
|||||||||||||||||||||||||||||||||||||||
Sbjct 1 -----------------------------------ATGGATGAAATCAAAGCCAAGGACAGGATCATCTTTTCC 39
Query 667 CTGGAAAAGGAACTGGAGACCCAGACAGGCTATGTACAGAAACTCCAACTTCAGAAGGAGGCTTTGGACGAACA 740
||||||||.|||||||||||.|||||.||||||||.|||||||||||.|||||||||||||||.||||.||.||
Sbjct 40 CTGGAAAAAGAACTGGAGACTCAGACGGGCTATGTGCAGAAACTCCAGCTTCAGAAGGAGGCTCTGGATGAGCA 113
Query 741 ACTCTTTCTGGTCAAGGAGGCTGAGTGCAACATGAGCAGCCCAAAACGAGAAATTCCAGGAAGGGCAGGTGATG 814
.|||||.||.|||||||||||.|||||.|||||||||||.||.||..||||.|||||||||||||||||.||.|
Sbjct 114 GCTCTTCCTTGTCAAGGAGGCAGAGTGTAACATGAGCAGTCCGAAGAGAGAGATTCCAGGAAGGGCAGGAGACG 187
Query 815 GTTCCGAACACTGCAGCAGTCCTGATTTGCGAAGAAATCAAAAGAGAATAGCTGAATTGAATGCCACTATAAGA 888
|.||.||.|||||||||||.||.||..||||||||||||||||||||||||||||.|||||.|||||||||.||
Sbjct 188 GCTCTGAGCACTGCAGCAGCCCCGACCTGCGAAGAAATCAAAAGAGAATAGCTGAGTTGAACGCCACTATACGA 261
Query 889 AAATTAGAAGACAGGAATACCTTGCTTGGAGATGAACGAAATGAACTGTTAAAACGTGTGCGGGAAACCGAAAA 962
||.||||||||||||||.|||||||||||||||||.||.|||||..||||||||||.|||||||||||||||||
Sbjct 262 AAGTTAGAAGACAGGAACACCTTGCTTGGAGATGAGCGGAATGAGTTGTTAAAACGCGTGCGGGAAACCGAAAA 335
Query 963 GCAATGTAAACCTCTCCTGGAAAGGAACAAGTGCCTCGCCAAGAGAAACGATGAACTGATGGTGTCCTTGCAGC 1036
.|||||.|||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||.|||||||
Sbjct 336 ACAATGCAAACCTCTCCTGGAAAGGAACAAGTGCCTAGCCAAGAGAAACGATGAACTGATGGTGTCTTTGCAGC 409
Query 1037 GCATGGAAGAAAAACTAAAAGCCGTTACCAAGGAAAATTCAGAAATGAGAGAAAAAATAACATCCCATCCACCC 1110
||||||||||.||||||||||||||.||||||||||||||||||||||||||||||||||||||.||.|||||.
Sbjct 410 GCATGGAAGAGAAACTAAAAGCCGTAACCAAGGAAAATTCAGAAATGAGAGAAAAAATAACATCTCACCCACCT 483
Query 1111 CTGAAGAAATTAAAATCTCTGAATGACCTCGACCAAGCTAATGAAGAACAAGAAACAGAGTTTCTAAAACTTCA 1184
.||||||||.|.||.||||||||.|||||.|||||||||||||||||||||||.|||||||||||||||||.||
Sbjct 484 TTGAAGAAACTGAAGTCTCTGAACGACCTTGACCAAGCTAATGAAGAACAAGAGACAGAGTTTCTAAAACTGCA 557
Query 1185 GGTCATTGAGCAACAGAACATTATTGATGAGCTCACAAGGGACCGAGAAAAGCTCATCCGTAGAAGAAAGCATA 1258
||||||||||||.||.|||||.||||||||||||||||||||.||||||||.||||||||||||||||||||.|
Sbjct 558 GGTCATTGAGCAGCAAAACATCATTGATGAGCTCACAAGGGATCGAGAAAAACTCATCCGTAGAAGAAAGCACA 631
Query 1259 GAAGAAGTTCCAAGCCAATTAAGAGGCCTGTTTTGGACCCGTTTATTGGCTATGATGAGGACTCTATGGATTCA 1332
|.|||||.||.||.|||||.||||||||||||||.||.|||||.|||||||||||.||||||||.|||||||||
Sbjct 632 GGAGAAGCTCGAAACCAATCAAGAGGCCTGTTTTAGATCCGTTCATTGGCTATGACGAGGACTCCATGGATTCA 705
Query 1333 GAGACATCATCCATGGCCTCATTTAGAACAGACAGAACACCAGCTACTCCTGATGATGACTTGGATGAAAGTTT 1406
||.||||||||||||.||||.||||||||||||.|.|||||.|||||.||.|||||||||.|||||||||||.|
Sbjct 706 GAAACATCATCCATGACCTCCTTTAGAACAGACCGGACACCTGCTACCCCCGATGATGACCTGGATGAAAGTCT 779
Query 1407 AGCAGCTGAAGAATCTGAACTAAGATTTCGACAATTAACAAAAGAATATCAGGCCCTCCAAAGAGCATATGCCC 1480
|||.||||||||||||||.|||.|||||.|||||.|||||||||||||.||.||||||||||||||||||||||
Sbjct 780 AGCTGCTGAAGAATCTGAGCTACGATTTAGACAACTAACAAAAGAATACCAAGCCCTCCAAAGAGCATATGCCC 853
Query 1481 TCCTACAGGAGCAGACGGGAGGCATCATCGACGCTGAACGAGAAGCCAAGGCTCAAGAACAGCTCCAAGCAGAG 1554
||.|.|||||.|||||.||.|||||||||||.||||||.|||||||||||||.|||||.||||||||.||||||
Sbjct 854 TCTTGCAGGAACAGACTGGCGGCATCATCGATGCTGAAAGAGAAGCCAAGGCACAAGAGCAGCTCCAGGCAGAG 927
Query 1555 GTGCTAAGGTATAAAGCCAAAATTGAAGACCTGGAAGCGACTCTGGCTCAGAAAGGGCAGGATTCACACTGGGT 1628
|||||.|||||.|..||||||||.|||||.||.||.||.||.||||||||||||||||||||||||||||||||
Sbjct 928 GTGCTGAGGTACAGGGCCAAAATCGAAGATCTAGAGGCAACGCTGGCTCAGAAAGGGCAGGATTCACACTGGGT 1001
Query 1629 AGAAGATAAACAACTTTTCATTAAGAGAAACCAGGAGCTTTTAGAAAAGATAGAAAAACAGGAGGCAGAAAATC 1702
||||||||||||||||||||||||||||||||||||||||||||||||||||||.||.|||||.|||||.||||
Sbjct 1002 AGAAGATAAACAACTTTTCATTAAGAGAAACCAGGAGCTTTTAGAAAAGATAGAGAAGCAGGAAGCAGAGAATC 1075
Query 1703 ACCGGTTACAACAAGAACTACAGGACGCCAGAGACCAGAATGAGCTGCTGGAGTTTCGAAACCTAGAGCTAGAA 1776
|||||.||||.||.|||||.|||||.|||||.||||||||||||||||||||||||||.||||||||.||.|||
Sbjct 1076 ACCGGCTACAGCAGGAACTTCAGGATGCCAGGGACCAGAATGAGCTGCTGGAGTTTCGCAACCTAGAACTGGAA 1149
Query 1777 GAGAGAGAGAGACGATCCCCTCCATTTAATCTCCAAATTCACCCATTCTCAGATGGTGTGAGTGCTCTACAGAT 1850
|||||||||||.||||||||||||||||||||.|||||||||||.||||||||||||||||||||.||.|||||
Sbjct 1150 GAGAGAGAGAGGCGATCCCCTCCATTTAATCTACAAATTCACCCCTTCTCAGATGGTGTGAGTGCGCTGCAGAT 1223
Query 1851 CTACTGTATGAAAGAAGGTGTTAAGGATGTGAACATCCCTGATCTCATAAAGCAGCTTGATATCTTGGGTGATA 1924
||||||.||||||||||||||.||||||||.|||||||||||.|||||||||||||||||||||.|.|||||.|
Sbjct 1224 CTACTGCATGAAAGAAGGTGTCAAGGATGTCAACATCCCTGACCTCATAAAGCAGCTTGATATCCTAGGTGACA 1297
Query 1925 ATGGGAATTTAAGAAATGAAGAACAAGTGGCCATAATTCAGGCCAGCACTGTGCTGTCCCTGGCAGAGAAGTGG 1998
|.|||||..||||.|||||||||||.||||||||.||||||||||||||||||||||||||||||||.||||||
Sbjct 1298 ACGGGAACCTAAGGAATGAAGAACAGGTGGCCATTATTCAGGCCAGCACTGTGCTGTCCCTGGCAGAAAAGTGG 1371
Query 1999 ATCCAGCAGATTGAAGGAGCTGAGGCTGCCCTACACCAGAAAATGATGGAATTGGAAAGTGACATGGAACAGTT 2072
|||||.||.|||||||||||.|||||||||||.||||||||||||||||||.||||||||||||||||||||||
Sbjct 1372 ATCCAACAAATTGAAGGAGCGGAGGCTGCCCTGCACCAGAAAATGATGGAACTGGAAAGTGACATGGAACAGTT 1445
Query 2073 CTGCAAAATAAAAGGCTATCTGGAGGAAGAACTAGACTACAGAAAACAAGCTCTTGACCAAGCATATATGAGAA 2146
|||||||||.||||||||.|||||||||||||||||||||||||||||.|||||||||||.|||||||||||||
Sbjct 1446 CTGCAAAATCAAAGGCTACCTGGAGGAAGAACTAGACTACAGAAAACAGGCTCTTGACCAGGCATATATGAGAA 1519
Query 2147 TCCAGGAACTAGAAGCTACTTTGTACAATGCTCTACAGCAAGAAACTGTTATCAAGTTTGGTGAATTATTAAGT 2220
||||||||||||||||||||||||||||||||||.||||||||||||||.|||||.||.||.|||.|.||||||
Sbjct 1520 TCCAGGAACTAGAAGCTACTTTGTACAATGCTCTGCAGCAAGAAACTGTGATCAAATTCGGCGAACTGTTAAGT 1593
Query 2221 GAAAAACAGCAAGAGGAGCTGAGGACGGCAGTAGAAAAGTTACGGCGGCAAATGCTGAGGAAGAGCAGAGAGTA 2294
||.||.|||||.|||||||||||||||||.||.|||||||||||||||||||||||||||||||||.|.|||||
Sbjct 1594 GACAAGCAGCAGGAGGAGCTGAGGACGGCTGTGGAAAAGTTACGGCGGCAAATGCTGAGGAAGAGCCGGGAGTA 1667
Query 2295 TGACTGTCAGATTCTTCAGGAGAGAATGGAGCTCTTACAGCAAGCCCATCAGAGAATTCGTGACTTAGAAGATA 2368
.|||||||||||.||.||||||||.|||||||||.|.||||||||.||.||||||||.||||||.|||||||||
Sbjct 1668 CGACTGTCAGATCCTCCAGGAGAGGATGGAGCTCCTGCAGCAAGCGCACCAGAGAATCCGTGACCTAGAAGATA 1741
Query 2369 AAACAGACATCCAGAAAAGACAAATAAAAGACTTAGAAGAAAAGAGTAACCGAAAACATGGA------------ 2430
|||||||||||||.||..||||.|||||.|||.||||||||||||..||.|.|.|||..|||
Sbjct 1742 AAACAGACATCCAAAAGCGACAGATAAAGGACCTAGAAGAAAAGAAAAATCAAGAACTCGGATCATACCCTCAG 1815
Query 2431 --------------------------------------------------- 2430
Sbjct 1816 AAGGCAAATGCTTTTAAACCTTCAAAGATGGCAAAATTGTTTACACCGATG 1866
