Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_02404
- Subject:
- XM_006507415.2
- Aligned Length:
- 2587
- Identities:
- 1522
- Gaps:
- 815
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCCCCACATTCCTGAGGATGAGGAGCCCCCCGGAGAGCCACAGGCAGCCCAGACCCAAGACTCTCCCTCTGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGGACCATTTCCCAGCCCTCCCACAATCGTCCTGACGGGGGATGCCAGTTCACCTGAAGGAGAGACTGACAAAA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ACCTAGTCAACAGGGCTCCCAGCCCTCACCGGAGGCTTTCCCACCGACACCTGAAGGTCTCCACTGCTTCGCTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ACTTCTGTGGACCCCTCGGGGCATGTCATTGACCTGGTGAATGACCAGCTGCCGGACATCAGCATCTCAGAAGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGACAAGAAAAAAAACCTGGCACTTCTGGAAGAAGCCAAGTTGGTGAGTGAGCGGTTCCTGACCCGCCGTGGGA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GGAAATCAAGGAGCAGCCTCGGAGACTCCCCATCAGCTGTTTCTCCAAACCTCAGCTCTGGGGCTTCTCCTGCA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TCCTCCAGGAGCTGCTCCCTCACCATCTCCACATCACCAGGTTTGGACATATGCAGTGGCCCTCAGTCCCCTCT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GCCAGGAGCACCACCACAGCAAAAGGGACATGAGGACGGGGTCTCCTCGCCTTGCCCCGGAGAGCCTAATGTCT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CCAAAGGGCTAGCTGACCTGAAGCAGAATGACCAGAGAAAAGTGTCTCAAGGCAGACTGGCTCCTCGCTCTCCC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ACAGTGGAGAAAACCAAGGAACTTACAGTAGAACAAAAGGAAAACTTTGATCCCCTTCAGCACGTGGAGGCCAC 740
Query 1 ----------------------------------------ATGGCCCTGAACAGCCCTCAGCCTGGCCCCGTGG 34
|||||.|||||||||||.|||||||||||.|..|
Sbjct 741 GCCCATGGCTCAGGCTTCTGGAGCAAGCATCAGTGGGAAAATGGCTCTGAACAGCCCCCAGCCTGGCCCTGCTG 814
Query 35 AGAGCGAGCTGGGGAAGCAGCTCTTGAAAACGGGCTGGGAGGGCAGCCCTCTGCCGAGAAGTCCAACCCAGGAT 108
|||..||||||||||.|||||||.||||.||.|.|.||||.||||.|||||||||.||||...||.||||||
Sbjct 815 AGATGGAGCTGGGGAGGCAGCTCCTGAAGACAGCCCGGGAAGGCAACCCTCTGCCCAGAACCACAGCCCAGG-- 886
Query 109 GCGGCAGGAGTG---GGTC-CCCCAGCCTCCCAGGGG-AGAGGCCCAGCTGGAGAGCCGATGGGGCCCGAGGCT 177
|| .|||||| | |||| |||||...||||.|||| || |||.|.|||||||||||.|||||.|||.|||||
Sbjct 887 GC-TCAGGAG-GAACGGTCTCCCCACATTCCCTGGGGCAG-GGCTCTGCTGGAGAGCCTATGGGACCCAAGGCT 957
Query 178 GGCTCCAAAGCTGAGCT----TCCACCCACTGTGTCCCGGCCCCCGCTGCTGCGAGGGCTCTCCTGGGACAGTG 247
||||||||.|||||||| | ||.||||||||||||||||.|||.|.||.|||.|||||||||||||..
Sbjct 958 GGCTCCAAGGCTGAGCTGAGGT----CCCCTGTGTCCCGGCCCCCCCTGATTCGGGGGGTCTCCTGGGACAGCA 1027
Query 248 GCCCTGAAGAACCTGGCCCCCGGCTGCAGAAAGTGCTTGCCAAGCTGCCACTGGCAGAGGAAGAAAAGCGTTTT 321
|||||||||||||.||.||||.|||||||||.|||||.||.||||||||.||||||||||||||.|||||.|||
Sbjct 1028 GCCCTGAAGAACCCGGTCCCCTGCTGCAGAAGGTGCTCGCTAAGCTGCCCCTGGCAGAGGAAGAGAAGCGGTTT 1101
Query 322 GCAGGCAAGGCCGGCGGCAAGCTGGCCAAGGCCCCTGGTCTCAAAGACTTTCAGATACAAGTGCAGCCCGTGCG 395
.|||||||.|| |||||..||||||.|.|||||.|||||||||||.|||||||||||||||||.|||||
Sbjct 1102 CCAGGCAAAGC------CAAGCCAGCCAAGCCACCTGGGCTCAAAGACTTCCAGATACAAGTGCAGCCGGTGCG 1169
Query 396 GATGCAGAAACTGACCAAGCTCCGAGAGGAGCACATCCTGATGAGAAATCAGAACTTAGTGGGGCTCAAGCTTC 469
.||||||||.||||||||||||||.|||||.|||||||||||||||||.||||||.|.||||||.|||||||.|
Sbjct 1170 CATGCAGAAGCTGACCAAGCTCCGGGAGGAACACATCCTGATGAGAAACCAGAACCTGGTGGGGTTCAAGCTCC 1243
Query 470 CAGACCTTAGTGAAGCAGCTGAGCAGGAAAAAGGGCTTCCTTCTGAACTCTCCCCAGCTATTGAGGAAGAAGAG 543
|.||.||.|||||.||.||.||||||||.|||||..|..|..||||||||.|||||||...|||||||||||||
Sbjct 1244 CTGAACTGAGTGAGGCCGCGGAGCAGGACAAAGGAGTCTCACCTGAACTCGCCCCAGCAGCTGAGGAAGAAGAG 1317
Query 544 TCAAAGAGTGGCTTAGATGTCATGCCTAATATTTCTGATGTGCTGCTGCGCAAACTGCGGGTCCACAGGAGT-- 615
||.||||||||..|.|||||.|||||.||.||||||||..|..|||||||||||||..||||.|||| |||
Sbjct 1318 TCCAAGAGTGGTCTGGATGTGATGCCCAACATTTCTGACATATTGCTGCGCAAACTTAGGGTTCACA--AGTCA 1389
Query 616 CTCCCTGGAAGTGCCCCTCCACTCACTGAAAAGGAAGTTGAGAACGTGTTTGTGCAACTGTCCTTGGCCTTTAG 689
|||.|||||||.|||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||
Sbjct 1390 CTCACTGGAAGCGCCCCTCCACTCACTGAAAAGGAAGTTGAGAACGTGTTTGTACAACTGTCCTTGGCCTTTAG 1463
Query 690 AAATGACAGCTACACTCTGGAATCTAGAATTAACCAGGCTGAAAGGGAACGCAACCTGACAGAGGAGAACACTG 763
|||||||||||||||..||||.||||||||||||||||||||||||||.||||||||||||||.||||||||.|
Sbjct 1464 AAATGACAGCTACACCTTGGAGTCTAGAATTAACCAGGCTGAAAGGGAGCGCAACCTGACAGAAGAGAACACGG 1537
Query 764 AGAAAGAACTGGAAAACTTCAAAGCTTCCATTACGTCCTCAGCTTCAC-TCTGGCACCACTGTGAGCACCGGGA 836
||||.||||||||||||||||||||.|||||.||||||||||| ..|| |||||.|||||||.||.||||||||
Sbjct 1538 AGAAGGAACTGGAAAACTTCAAAGCCTCCATAACGTCCTCAGC-AAACATCTGGTACCACTGCGAACACCGGGA 1610
Query 837 AACCTACCAGAAGTTGCTGGAGGACATCGCTGTCCTGCACCGCCTGGCTGCCCGCCTCTCCAGCCGAGCTGAGG 910
.|||||.|||||..|.|||||.||||||||.|||.||||.||.||||||||||||||||||||.||.|||||.|
Sbjct 1611 GACCTATCAGAAACTTCTGGAAGACATCGCCGTCTTGCATCGTCTGGCTGCCCGCCTCTCCAGTCGGGCTGAAG 1684
Query 911 TGGTAGGCGCCGTCCGCCAGGAAAAGCGCATGTCGAAAGCAACGGAAGTGATGATGCAGTATGTGGAGAATCTA 984
||||.||.||.||.||||||||||||||||||||.||.||.||||||||||||||||||||||||||||||||.
Sbjct 1685 TGGTGGGTGCTGTTCGCCAGGAAAAGCGCATGTCAAAGGCCACGGAAGTGATGATGCAGTATGTGGAGAATCTG 1758
Query 985 AAGAGGACGTATGAGAAGGACCATGCGGAGCTCATGGAGTTTAAAAAGCTTGCAAATCAGAATTCAAGCCGCAG 1058
|||||.||||||||||||||||||||.|||||||||||.|||||.||.|||||||||||||||||.||.|||||
Sbjct 1759 AAGAGAACGTATGAGAAGGACCATGCTGAGCTCATGGAATTTAAGAAACTTGCAAATCAGAATTCCAGTCGCAG 1832
Query 1059 CTGTGGCCCCTCTGAAGATGGGGTCCCTCGCACGGCACGGTCCATGTCCCTCACGCTGGGAAAGAATATGCCTC 1132
||||||.|||||||||||.|||||.|||||.|||||.||.||.|||||||||||..||||||||||.|||||.|
Sbjct 1833 CTGTGGGCCCTCTGAAGACGGGGTTCCTCGAACGGCGCGATCTATGTCCCTCACAATGGGAAAGAACATGCCCC 1906
Query 1133 GCCGGAGGGTCAGCGTTGCTGTGGTTCCTAAGTTTAATGCCCTGAATCTGCCTGGCCAAACTCCCAGCTCATCA 1206
||||||||||||||||||||||||||||.|||||||||||||||||.||||||||||||.|.||.|||||.|||
Sbjct 1907 GCCGGAGGGTCAGCGTTGCTGTGGTTCCCAAGTTTAATGCCCTGAACCTGCCTGGCCAAGCCCCGAGCTCTTCA 1980
Query 1207 TCCATTCCCTCCTTACCAGCCTTGTCGGAATCACCCAATGGGAAAGGCAGCCTACCTGTCACTTCAGCACTGCC 1280
.||||.||.|||.|||||||..||||.|||||..||||||||||..|||||.|..|.|||.|..||||.|||||
Sbjct 1981 CCCATGCCTTCCCTACCAGCTCTGTCTGAATCGTCCAATGGGAAGAGCAGCATCTCCGTCTCCCCAGCGCTGCC 2054
Query 1281 TGCACTTTTGGAAAATGGAAAGACAAATGGGGACCCAGATTGTGAAGCCTCTGCTCCTGCGCTGAC-CCTGAGC 1353
|||||||||||||||||||||||||||||..||..|..|.||.||||....|||.||||.|| .|| ||..|||
Sbjct 2055 TGCACTTTTGGAAAATGGAAAGACAAATGCAGAGGCTAACTGCGAAGTGGGTGCCCCTGTGC-CACTCCCAAGC 2127
Query 1354 TGCCTGGAGGAGCTTAGTCAGGAGACCAAGGCCAGGATGGAGGAAGAAGCCTACAGCAAGGGATTCCAAGAAGG 1427
||.|||||||||...||.||||||||||||||||.|...||||||||||||||||||||.||||.|||.|||||
Sbjct 2128 TGTCTGGAGGAGACGAGCCAGGAGACCAAGGCCAAGGCAGAGGAAGAAGCCTACAGCAAAGGATACCAGGAAGG 2201
Query 1428 TCTAAAGAAGACCAAAGAACTTCAAGACCTGA---AGGAGGAGGAGGAAGAACAGAAGAGTGAGAGTCCTGAGG 1498
..|||||||||||.|||||||||||||||||| ||||||||||||||||||||||||..||||||||.||||
Sbjct 2202 GGTAAAGAAGACCGAAGAACTTCAAGACCTGAAGGAGGAGGAGGAGGAAGAACAGAAGACGGAGAGTCCCGAGG 2275
Query 1499 AACCTGAAGAGGTAGAAGAAACTGAGGAAGAGGAAAAGGGCCCAAGAAGCAGCAAACTTGAAGAATTGGTCCAT 1572
||||.|||||||||||||||||..||||.||.||.||||.||...||||||||||||||||||||.|||||||.
Sbjct 2276 AACCAGAAGAGGTAGAAGAAACCCAGGAGGACGAGAAGGACCAGGGAAGCAGCAAACTTGAAGAACTGGTCCAC 2349
Query 1573 TTCTTACAAGTCATGTATCCCAAACTGTGTCAGCACTGGCAAGTGATCTGGATGATGGCTGCAGTGATGCTGGT 1646
|||.||||||||||||||||.|||.|||||||.||||||||||||||||||||||||||.||||||||||||||
Sbjct 2350 TTCCTACAAGTCATGTATCCTAAATTGTGTCAACACTGGCAAGTGATCTGGATGATGGCCGCAGTGATGCTGGT 2423
Query 1647 CTTGACTGTTGTGCTGGGGCTCTACAATTCCTATAACTCTTGTGCAGAGCAGGCTGATGGGCCCCTTGGAAGAT 1720
|||||.||||||.||.|||||.||||.||||||||||||.||..|||||.||||.||||||||||.|||.||||
Sbjct 2424 CTTGAGTGTTGTTCTCGGGCTGTACAGTTCCTATAACTCCTGCACAGAGGAGGCCGATGGGCCCCCTGGGAGAT 2497
Query 1721 CCACTTGCTCGGCAGCCCAGAGGGACTCCTGGTGGAGCTCAGGACTCCAGCATGAGCAGCCTACAGAGCAG 1791
||||.|||||.|||||||||.|||||||||||||||||||.|||||||||||.||||.|||..||||||||
Sbjct 2498 CCACCTGCTCTGCAGCCCAGCGGGACTCCTGGTGGAGCTCCGGACTCCAGCAAGAGCTGCCAGCAGAGCAG 2568
