Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_02600
- Subject:
- XR_001745460.2
- Aligned Length:
- 3051
- Identities:
- 608
- Gaps:
- 2429
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGAGCCTGCCTGGAGCGCGTACTCAGCGGCTCTCGGGTCCCAGCGTCCCAGCCGCGGCCCGCGCTCCTCCGCCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGCTCCTCCTCCTCCTCTTCCTCCTCCTCCTCCTCTCTAGGCACCCCCGTCCCCTCCTTCCAGCGGCTGCAGCC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCCAGCCCCAACTCTCCGCGCTTACTCCTGGGACGCGCGTCCTCGCCCCATCCTTTGCTTCCTTCCTTCCTTCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TTCTTCCTTCCTCCCCTGGCTCCCGCCCTCCCTCTCCAGGTCGCCCTCCCGGGGCCCGATTGTCTCGGTGCCCC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCTCCCGGCCCGCGCCCTGCCCCGTCTCTCCCTTGCACTTCCTGAGTCGCCCGCCGCCGCCGTCGCAGACTCGC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CGCGGGAGCCCCAGCCCAACCCGAGCCCGACAGCCACTGCCCCGGCTCCAGCTCCAGCCCCACAGCCCGCGGCG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CCCGCCCGAGGGAGCCCCGGCGCCCGGGGAAGGCTCCAGTGGGCTAGCGCGCCCTCGCCCAGCCCCGCGCCCCA 518
Query 1 ----------------------------------ATGAACAACGGCGGCAAAGCCGAGAAGGAGAACACCCCGA 40
||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GCCCTGCCCGGCCCGGCGAGGAAGGACCGGGAAGATGAACAACGGCGGCAAAGCCGAGAAGGAGAACACCCCGA 592
Query 41 GCGAGGCCAACCTTCAGGAGGAGGAGGTCCGGACCCTATTTGTCAGTGGCCTTCCTCTGGATATCAAACCTCGG 114
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GCGAGGCCAACCTTCAGGAGGAGGAGGTCCGGACCCTATTTGTCAGTGGCCTTCCTCTGGATATCAAACCTCGG 666
Query 115 GAGCTCTATCTGCTTTTCAGACCATTTAAGGGCTATGAGGGTTCTCTTATAAAGCTCACATCTAAACAGCCTGT 188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GAGCTCTATCTGCTTTTCAGACCATTTAAGGGCTATGAGGGTTCTCTTATAAAGCTCACATCTAAACAGCCTGT 740
Query 189 AGGTTTTGTCAGTTTTGACAGTCGCTCAGAAGCAGAGGCTGCAAAGAATGCTTTGAATGGCATCCGCTTCGATC 262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 AGGTTTTGTCAGTTTTGACAGTCGCTCAGAAGCAGAGGCTGCAAAGAATGCTTTGAATGGCATCCGCTTCGATC 814
Query 263 CTGAAATTCCGCAAACACTACGACTAGAGTTTGCTAAGGCAAACACGAAGATGGCCAAGAACAAACTCGTAGGG 336
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CTGAAATTCCGCAAACACTACGACTAGAGTTTGCTAAGGCAAACACGAAGATGGCCAAGAACAAACTCGTAGGG 888
Query 337 ACTCCAAACCCCAGTACTCCTCTGCCCAACACTGTACCTCAGTTCATTGCCAGAGAGCCATATGAGCTCACAGT 410
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 ACTCCAAACCCCAGTACTCCTCTGCCCAACACTGTACCTCAGTTCATTGCCAGAGAGCCATATGAGCTCACAGT 962
Query 411 GCCTGCACTTTACCCCAGTAGCCCTGAAGTGTGGGCCCCGTACCCTCTGTACCCAGCGGAGTTAGCGCCTGCTC 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GCCTGCACTTTACCCCAGTAGCCCTGAAGTGTGGGCCCCGTACCCTCTGTACCCAGCGGAGTTAGCGCCTGCTC 1036
Query 485 TACCTCCTCCTGCTTTCACCTATCCCGCTTCACTGCATGCCCA-GTGTTTCTCTCCTGAGGCAAAGCCCAACAC 557
||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||| |.|
Sbjct 1037 TACCTCCTCCTGCTTTCACCTATCCCGCTTCACTGCATGCCCAGGTG------TCC--------AGCCC--CCC 1094
Query 558 ACCTG----------TCTTTTGTCCAC----------TTCTCCAGCAAATTAGATTTGTCTCTGGGAATG---- 607
||||| || |.|||||.| ||| |||.| |||||| .||||.|
Sbjct 1095 ACCTGCCATGGGGGCTC-TGTGTCCCCGCCCCGTCCTTTC-CCACC----------TGTCTC-AGGAAGGCAGC 1155
Query 608 -----------TGTTTGTAACATACCAACCTACTG----CAG----ACCAG--CA-GAG----GGA-------G 648
|.|||| |.||...|.|.|.|| ||| ||||| || ||| ||| |
Sbjct 1156 TCCAACTCTGCTCTTTG---CTTAGTGAGCAAGTGGATTCAGATGCACCAGGCCATGAGCCGTGGATGCGCTGG 1226
Query 649 CTCCCATGT----------------------------------------------------------------- 657
||||| |
Sbjct 1227 CTCCC---TCCCTCCGAGGCTACTTCTCAGGGCTGGAAGTCCCGTCAGTTCTGCTGAATACTATGTCCCAGGTG 1297
Query 658 -------------------------------------------------------------------------- 657
Sbjct 1298 TGTGATGGCGGCTGCAATCTGTCTTGTGGGTATTAATGCAATCTTCAGTGGTGGCTACTGTTCTCTAGCTGTTC 1371
Query 658 -------------------------------------------------------------------------- 657
Sbjct 1372 TACAAAACTGGAGCATGCTGGCTTGAAAAACCCTTGCCCAGTTTTGATCCCTTCAAGACTTTGTCACAGCCTCT 1445
Query 658 -------------------------------------------------------------------------- 657
Sbjct 1446 ATCACACATCTGTTTTTCTCGAAGAAAAAAATATAATTAATAAAAATGTTTTACTCTTTTACACTGTATAATTG 1519
Query 658 -------------------------------------------------------------------------- 657
Sbjct 1520 TAAGAAATAGCGTATTATTTGTGAATGCATGGTCTGAAATTTCTGTACAGTTTGGAGATATTTTCAAACGAAAC 1593
Query 658 -------------------------------------------------------------------------- 657
Sbjct 1594 GTAAGAGAAGTCAACAATAAAACCAAGAAAAGTGAGTATTTTTATACCAAACATTTTAAGTATGCTGGGATGGA 1667
Query 658 -------------------------------------------------------------------------- 657
Sbjct 1668 CGATCTTACACTGGTTTGGATCACAGTTTTTGTTCTTGACTTTTGAATGCTTGTAATTAAAAATATCTATTTTT 1741
Query 658 -------------------------------------------------------------------------- 657
Sbjct 1742 TTCCTCTGAAGTAAGTTGCATGTTTGAGGCATGTTTCCAAATATTATCAAAATATCCTGAATTGTATTGTGAAT 1815
Query 658 -------------------------------------------------------------------------- 657
Sbjct 1816 ATATAGAAATCTGTGCCTGGCCGGAGTCCAGGGTAAATTAGTAGCATGGTGTTAGATGTTAGAAACAGAACTGT 1889
Query 658 -------------------------------------------------------------------------- 657
Sbjct 1890 TATTTGCAGTGTTAGGTCTAGGATCCCAGTTCTAGTAGGACAGCCCTGCAAGACAATCAACCAGAAGCCTCCAG 1963
Query 658 -------------------------------------------------------------------------- 657
Sbjct 1964 GAGCTTCTACCTATGGCTTATTCACAACTGGGCAAGAAAACATCATTGGTAAGAACTGCTGAGTGTGCCCTTAG 2037
Query 658 -------------------------------------------------------------------------- 657
Sbjct 2038 AAAGCCCTAGTAGCTCCAGCTGTGACTATATCAACTGTGTGCCAAGTGTGACTTTGTACAGTTTTATGTTTCCA 2111
Query 658 -------------------------------------------------------------------------- 657
Sbjct 2112 CTCTCCTGTATGTGTAGCCACTCGATGCCTAACCTACCTTCCACAAGCCAGCCCCGCATCCCTGCTCCCGCAGT 2185
Query 658 -------------------------------------------------------------------------- 657
Sbjct 2186 GTAAGTGCAGAGCCTGCCTCACTGGTAAGGGAAAACCTTGGCTTGGGAGGCCAGCCCTGGCCCTTGAAGGGGTT 2259
Query 658 -------------------------------------------------------------------------- 657
Sbjct 2260 GGCTGTGCCCAGCCCACCTGGCTGCAGTGGGCAGCTCATGTCTGTATCTCCAAAGTGATGTTTGTTTGCAAAAC 2333
Query 658 -------------------------------------------------------------------------- 657
Sbjct 2334 ACCGGCTGAACTGAGCTGGTGTTGCCAACTCTTGGCAGCACTGGGCCAAACCGACCACATACCATGAGCTCCCA 2407
Query 658 -------------------------------------------------------------------------- 657
Sbjct 2408 AATGGCGTGTGCTCACTGTGAGACGTCCTGCCACACCCCACAGGAGACGGAGGCAGTGGGCATTTGGAACCAAT 2481
Query 658 -------------------------------------------------------------------------- 657
Sbjct 2482 TCTATTCAGACTTCGTCAAAGCCAAAGTCAGTCTGGTGTTGTCAGTTGACACATCTCCAGAGTTCATGACAGCT 2555
Query 658 -------------------------------------------------------------------------- 657
Sbjct 2556 CAACCTCTCCCCTTGTACAGAAGCCATTTTTGTAAAACCACACTGACCTAAATTCAGCTGCCAAACACAGTCTT 2629
Query 658 -------------------------------------------------------------------------- 657
Sbjct 2630 TCCTATTGATCCGCTCGGCTTATGTTGAAAATTTCAATGTCATGATTACCTGGTTGGTTTGGGTTTTTGTTTTG 2703
Query 658 -------------------------------------------------------------------------- 657
Sbjct 2704 TTATTTTCCATTAGAAATATAAAGATGTCAAGAAGCTTTTAAAGGTCAACACAAAAAACCAAGGCCAGGAGTGA 2777
Query 658 -------------------------------------------------------------------------- 657
Sbjct 2778 GGGGCTCTTTCTTACCGTAAATAAGGGGAAAAGGCAGTTAGCTCAAGGACTTGTGACGGATCCACTTTGGTGTT 2851
Query 658 -------------------------------------------------------------------------- 657
Sbjct 2852 CAAGGACCTGCTTATGCCCTCAGTGCCAATCGGCTCTTGGTGAGATGACTGTACTCCTAAGGAAAATAGCCACT 2925
Query 658 -------------------------------------------------------------------------- 657
Sbjct 2926 TCTGCAGTCTATTATGCTTTTATAACTGTTTAAAGGTACTTTTCTATTGTCATTTTTAAAAAATAAAGTGCTTA 2999
Query 658 ----------------- 657
Sbjct 3000 TTCCAGCTGTCACACCA 3016
