Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_02724
- Subject:
- XR_001755677.2
- Aligned Length:
- 2390
- Identities:
- 1118
- Gaps:
- 1272
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACTTTCTCTTTGTCGGAGGAGCTCCTCTGTTTCCTGTGCAGTAGCTCCCGTTGCGGCGGCACCCGTGGCAGCCC 74
Query 1 -----------------ATGGCAGCGACCGATATAGCTCGCCAGGTGGGTGAAGGTTGCCGAACTGTCCCCCTG 57
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 TGGCGGACGCAGGAGCGATGGCAGCGACCGATATAGCTCGCCAGGTGGGTGAAGGTTGCCGAACTGTCCCCCTG 148
Query 58 GCTGGACATGTGGGGTTTGACAGCTTGCCTGACCAGCTGGTGAATAAGTCCGTCAGCCAGGGCTTCTGCTTCAA 131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GCTGGACATGTGGGGTTTGACAGCTTGCCTGACCAGCTGGTGAATAAGTCCGTCAGCCAGGGCTTCTGCTTCAA 222
Query 132 CATCCTGTGCGTGGGAGAGACAGGTTTGGGCAAGTCCACCCTCATGGACACCCTGTTCAACACCAAATTCGAAG 205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CATCCTGTGCGTGGGAGAGACAGGTTTGGGCAAGTCCACCCTCATGGACACCCTGTTCAACACCAAATTCGAAG 296
Query 206 GGGAGCCAGCCACCCACACACAGCCGGGTGTCCAGCTCCAGTCTAATACCTATGACCTCCAAGAGAGCAACGTG 279
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GGGAGCCAGCCACCCACACACAGCCGGGTGTCCAGCTCCAGTCTAATACCTATGACCTCCAAGAGAGCAACGTG 370
Query 280 AGGCTAAAGCTCACGATCGTTAGCACAGTTGGCTTTGGGGACCAGATCAACAAAGAGGACAGCTACAAGCCTAT 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AGGCTAAAGCTCACGATCGTTAGCACAGTTGGCTTTGGGGACCAGATCAACAAAGAGGACAGCTACAAGCCTAT 444
Query 354 CGTGGAATTCATCGATGCACAATTCGAGGCCTACCTGCAGGAAGAGCTAAAGATCCGAAGAGTGCTACACACCT 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CGTGGAATTCATCGATGCACAATTCGAGGCCTACCTGCAGGAAGAGCTAAAGATCCGAAGAGTGCTACACACCT 518
Query 428 ACCATGACTCCCGAATCCATGTCTGCTTGTATTTCATTGCCCCCACGGGTCATTCCCTGAAGTCTCTGGACCTA 501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 ACCATGACTCCCGAATCCATGTCTGCTTGTATTTCATTGCCCCCACGGGTCATTCCCTGAAGTCTCTGGACCTA 592
Query 502 GTGACTATGAAGAAGCTGGACAGTAAGGTGAACATCATCCCCATCATTGCCAAAGCAGATGCCATTTCGAAGAG 575
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GTGACTATGAAGAAGCTGGACAGTAAGGTGAACATCATCCCCATCATTGCCAAAGCAGATGCCATTTCGAAGAG 666
Query 576 TGAGCTAACAAAGTTCAAAATCAAAATCACCAGCGAGCTTGTCAGCAACGGAGTCCAGATCTATCAGTTTCCTA 649
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TGAGCTAACAAAGTTCAAAATCAAAATCACCAGCGAGCTTGTCAGCAACGGAGTCCAGATCTATCAGTTTCCTA 740
Query 650 CAGATGATGAGTCGGTGGCAGAGATCAATGGAACCATGAACGCCCACCTGCCGTTTGCTGTCATTGGCAGCACA 723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CAGATGATGAGTCGGTGGCAGAGATCAATGGAACCATGAACGCCCACCTGCCGTTTGCTGTCATTGGCAGCACA 814
Query 724 GAAGAACTGAAGATAGGCAACAAGATGATGAGGGCGCGGCAGTATCCTTGGGGCACTGTGCAGGTTGAAAACGA 797
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 GAAGAACTGAAGATAGGCAACAAGATGATGAGGGCGCGGCAGTATCCTTGGGGCACTGTGCAG----------- 877
Query 798 GGCCCACTGCGACTTTGTGAAGCTGCGGGAGATGCTGATTCGGGTCAACATGGAGGATCTGCGGGAGCAGACCC 871
Sbjct 878 -------------------------------------------------------------------------- 877
Query 872 ACACCCGGCACTATGAGCTGTATCGCCGCTGTAAGCTGGAGGAGATGGGCTTCAAGGACACCGACCCTGACAGC 945
Sbjct 878 -------------------------------------------------------------------------- 877
Query 946 AAACCCTTCAGTTTACAGGAGACATATGAGGCCAAAAGGAACGAGTTCCTAGGGGAACTCCAGAAAAAAGAAGA 1019
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 878 ----------GTTTACAGGAGACATATGAGGCCAAAAGGAACGAGTTCCTAGGGGAACTCCAGAAAAAAGAAGA 941
Query 1020 GGAGATGAGACAGATGTTCGTCCAGCGAGTCAAAGAGAAAGAAGCGGAGCTCAAAGAGGCAGAGAAAGAGCTGC 1093
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 942 GGAGATGAGACAGATGTTCGTCCAGCGAGTCAAAGAGAAAGAAGCGGAGCTCAAAGAGGCAGAGAAAGAGCTGC 1015
Query 1094 ACGAGAAGTTTGACCGTCTGAAGAAACTGCACCAGGACGAGAAGAAGAAACTGGAGGATAAGAAGAAATCCCTG 1167
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1016 ACGAGAAGTTTGACCGTCTGAAGAAACTGCACCAGGACGAGAAGAAGAAACTGGAGGATAAGAAGAAATCCCTG 1089
Query 1168 GATGATGAAGTGAATGCTTTCAAGCAAAGAAAGACGGCGGCTGAGCTGCTCCAGTCCCAGGGCTCCCAGGCTGG 1241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1090 GATGATGAAGTGAATGCTTTCAAGCAAAGAAAGACGGCGGCTGAGCTGCTCCAGTCCCAGGGCTCCCAGGCTGG 1163
Query 1242 AGGCTCACAGACTCTGAAGAGAGACAAAGAGAAGAAAAACTTTTTT---------------------------- 1287
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1164 AGGCTCACAGACTCTGAAGAGAGACAAAGAGAAGAAAAACTTTTTTTAATCTTGTCTTCAGCAGCTGCACTAAG 1237
Query 1288 -------------------------------------------------------------------------- 1287
Sbjct 1238 TCTAAAGGAGAAGACTGCCATTATAGAAGAGTTAGGGTTCCATATTGTCTCAAATCAGAAATCAACCAATTTCC 1311
Query 1288 -------------------------------------------------------------------------- 1287
Sbjct 1312 TCTCCCCTCAAACTGCAAGCACACACACATACACCACACCACTCAACAAGTGTTCATGTGTCCCTGTGTCCAGG 1385
Query 1288 -------------------------------------------------------------------------- 1287
Sbjct 1386 CAAGAAGCTCTCTTCCTGACTCACATGGTATTTTAAATGGAAGTGTCTTGTCCTAACTAACAAGGCAGGAAAAG 1459
Query 1288 -------------------------------------------------------------------------- 1287
Sbjct 1460 AACCATCAGAGCTGGAAAATGGACGAAATGTAACCTCAGAGAAACAACTACAGGACCACTCACCCAAGTGTAAG 1533
Query 1288 -------------------------------------------------------------------------- 1287
Sbjct 1534 TGACTGGGGCAGGACACCTCAGCTGTGGGTATGAAAGTACTGTTCTGTTCACAAGGTTTTGTTTGAGTTTTATG 1607
Query 1288 -------------------------------------------------------------------------- 1287
Sbjct 1608 TTTTTCTTTTAAACATTTCTCTGGTTCGATGGGTTGACTGTCTACAGCCACTGTTAAACATTTCTGAATATGCA 1681
Query 1288 -------------------------------------------------------------------------- 1287
Sbjct 1682 AGAGAAAGTCAAGTGACATTTGTATCTTCTTCAGCATTCGCAGACCTTCTATAGATTCCAGCAAAGGGGGAAAA 1755
Query 1288 -------------------------------------------------------------------------- 1287
Sbjct 1756 TGTATCCACTATCTAACACTTAGGTAGAGAAGGGAGGGGGTTTAAGCTTAGTGAGGGCAAAATTACTCCATTCC 1829
Query 1288 -------------------------------------------------------------------------- 1287
Sbjct 1830 ACCTTCCGAGACCAGTTAGGGTTTTGAGAGAGGTTTCTGCTCAACCTGGGATCTGGAGGGAGAGCTTTGATGTT 1903
Query 1288 -------------------------------------------------------------------------- 1287
Sbjct 1904 GGTAAATCTGCCTTGAATTCATTGGTTTAACTTGCATCAAAATACCATGTGAGTGTGCTCATTCTCATATATCC 1977
Query 1288 -------------------------------------------------------------------------- 1287
Sbjct 1978 CCTACCACCATCACCACCATTCTGCTGTTCAGTGTCTCTTGAGAGAGCCTCTTTGCATGTTTTCCAGAATCTGT 2051
Query 1288 -------------------------------------------------------------------------- 1287
Sbjct 2052 GTGTGTTTTTCCTTTCTTCTCCTTTGTTCTTTTTGCTCAAAGGTGTGACCAGTCATTGCCCCTCTGGGGCTTTC 2125
Query 1288 -------------------------------------------------------------------------- 1287
Sbjct 2126 ATTCTCCAGGAGAAACATCCCAGAACCAGCACTGTTTAGCCTGATACCTTTCTAATGTCCATGTCAATTTTCAA 2199
Query 1288 ---------------------- 1287
Sbjct 2200 TAAAATTCAAAGAAATGCTAAA 2221
