Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_02742
- Subject:
- NM_001109685.1
- Aligned Length:
- 1245
- Identities:
- 901
- Gaps:
- 267
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCGGGCGGCCGATTCGGGTTCATGGGAGCGCGTCCGCCAGCTTGCGGCATACGGCCAGCCGACTCCGTCCTG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGGGCGGGACACCGGGTCCGCGCGCGTCCCGGAGCCCGGAGCCTGCAAGCTATGCGCGGACACTACGGGGCTCC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGGAGCAGCAGGGAGCTGGAGCAGTCCCCGATGCAGCCGATGGCTTCGGCATCCAGCCCGTGCTCCTGCGGGAG 222
Query 1 ------------------------------------------ATGAAGGAGATGTTGGCGAAGGACCTGGAGGA 32
||||||||.|||.|||||||||||||||||||
Sbjct 223 GAAGTGGTCCAGCTTCAAGAGGAAGTGCACCTTCTCCGGCAGATGAAGGAAATGCTGGCGAAGGACCTGGAGGA 296
Query 33 GTCGCAGGGCGGCAAGTCCTCTGAGGTCCTCTCGGCCACCGAGCTCAGGGTCCAGCTGGCCCAGAAGGAGCAGG 106
|||.|||||||||||||.|||||||||||||||.|||||.||||||.||||.|||||||..|||||||||||||
Sbjct 297 GTCACAGGGCGGCAAGTGCTCTGAGGTCCTCTCAGCCACTGAGCTCCGGGTGCAGCTGGTACAGAAGGAGCAGG 370
Query 107 AGCTAGCCAGAGCCAAAGAAGCCTTGCAGGCCATGAAAGCTGATCGGAAGCGCTTAAAGGGCGAGAAGACAGAC 180
|.||.|||||||||||||||||||||||.||||||||||||||.||||||||||||||||||||||||||.|||
Sbjct 371 AACTGGCCAGAGCCAAAGAAGCCTTGCAAGCCATGAAAGCTGACCGGAAGCGCTTAAAGGGCGAGAAGACTGAC 444
Query 181 CTGGTGAGCCAGATGCAGCAGCTGTATGCCACACTGGAGAGCCGCGAGGAGCAGCTCCGAGACTTCATCCGCAA 254
||||||||||||||||||||||||||.|||||.|||||||||||||||||||||.|.|||||||||||||||||
Sbjct 445 CTGGTGAGCCAGATGCAGCAGCTGTACGCCACGCTGGAGAGCCGCGAGGAGCAGTTGCGAGACTTCATCCGCAA 518
Query 255 CTATGAGCAGCACCGCAAGGAGAGCGAGGATGCGGTCAAAGCGCTGGCCAAGGAGAAGGACCTGCTGGAGCGTG 328
||||||||||||||||||||||||.||.||.||.||||||||.|||||||||||||||||||||||||||||.|
Sbjct 519 CTATGAGCAGCACCGCAAGGAGAGTGAAGACGCAGTCAAAGCACTGGCCAAGGAGAAGGACCTGCTGGAGCGAG 592
Query 329 AGAAGTGGGAGCTGCGGCGCCAAGCCAAGGAGGCCACAGACCACGCCACGGCACTGCGCTCCCAGCTGGACCTC 402
|||||||||||||.||.||.||.||||||||.|||||||||||.||..||||.|||||||||||||||||||||
Sbjct 593 AGAAGTGGGAGCTTCGACGGCAGGCCAAGGAAGCCACAGACCATGCTGCGGCCCTGCGCTCCCAGCTGGACCTC 666
Query 403 AAGGACAACCGGATGAAGGAGCTGGAGGCCGAGCTGGCCATGGCCAAACAGTCCTTAGCTACGCTGACCAAGGA 476
|||||||||||.|||||||||||||||||.|||||.|||||||||||.|||||||||||.||.|||||||||||
Sbjct 667 AAGGACAACCGCATGAAGGAGCTGGAGGCGGAGCTCGCCATGGCCAAGCAGTCCTTAGCCACTCTGACCAAGGA 740
Query 477 CGTCCCCAAGCGGCATTCCCTCGCCATGCCGGGCGAGACGGTGCTCAATGGCAACCAGGAGTGGGTGGTGCAGG 550
.|||||||||.|||||||||||||||||||.||.||||||||||||||||||||||||||.|||||||||||||
Sbjct 741 TGTCCCCAAGAGGCATTCCCTCGCCATGCCCGGTGAGACGGTGCTCAATGGCAACCAGGAATGGGTGGTGCAGG 814
Query 551 CGGACCTCCCGCTGACCGCAGCCATCCGGCAGAGTCAACAGACTCTCTACCACTCACACCCCCCTCACCCTGCG 624
|.||||||||.|||||.||.|||||||||||.||.||||||||||||||||||||||||||.||.||||||||.
Sbjct 815 CTGACCTCCCACTGACTGCTGCCATCCGGCAAAGCCAACAGACTCTCTACCACTCACACCCTCCCCACCCTGCA 888
Query 625 GACCGGCAAGCGGTCAGGGTGAGCCCCTGCCACTCCCGGCAGCCCTCTGTCATCTCCGACGCATCTGCCGCCGA 698
||||||||| |||||||||||||||||||||||..|.||||||||.||||||||.||.||.|||||.||.||
Sbjct 889 GACCGGCAA---GTCAGGGTGAGCCCCTGCCACTCAAGACAGCCCTCCGTCATCTCTGATGCTTCTGCTGCTGA 959
Query 699 AGGCGACCGGTCGTCCACACCGAGCGACATCAACTCCCCTCGACACCGGACACACTCCCTCTGCAACGGCGACA 772
|||.||||||||.||.|||||.|||||||||||||||||..|||||||||||||||||||||||||||||||||
Sbjct 960 AGGTGACCGGTCATCTACACCAAGCGACATCAACTCCCCAAGACACCGGACACACTCCCTCTGCAACGGCGACA 1033
Query 773 GTCCCGGCCCAGTTCAGAAGAACCTGCACAACCCTATTGTACAGTCACTAGAGGATCTTGAAGACCAAAAACGG 846
|||||||||||||||||||||.|||.||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1034 GTCCCGGCCCAGTTCAGAAGAGCCTACACAACCCTATTGTACAGTCACTAGAGGATCTTGAAGACCAAAAACGG 1107
Query 847 AAAAAGAAGAAAGAGAAGATGGGATTCGGCTCCATCTCCCGCGTCTTCGCCAGAGGGAAGCAGCGGAAGTCCCT 920
|||||||||||.||||||||||||||||||||||||||.||.||||||||||||||||||||.|||||||||||
Sbjct 1108 AAAAAGAAGAAGGAGAAGATGGGATTCGGCTCCATCTCTCGAGTCTTCGCCAGAGGGAAGCAACGGAAGTCCCT 1181
Query 921 CGACCCCGGCCTCTTTGATGGTACCGCCCCTGATTATTACATAGAGGAGGACGCGGACTGG 981
||||||.|||||||||||||||||||||||||||||||||||||||||.||||||||||||
Sbjct 1182 CGACCCGGGCCTCTTTGATGGTACCGCCCCTGATTATTACATAGAGGAAGACGCGGACTGG 1242