Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_02749
Subject:
NM_173732.3
Aligned Length:
1339
Identities:
650
Gaps:
590

Alignment

Query    1  ATGGCGGGAGGAATGAAAGTGGCGGTCTCGCCGGCAGTTGGTCCCGGGCCCTGGGGCTCGGGAGTCGGGGGCGG  74
            ||||||||||||||.||||||.||||.|.|.||||.||||||||.||||||.||.|||.|||.|.|||||||||
Sbjct    1  ATGGCGGGAGGAATCAAAGTGTCGGTGTGGTCGGCGGTTGGTCCAGGGCCCCGGTGCTGGGGGGCCGGGGGCGG  74

Query   75  TGGGACAGTGC-----GGCTACTCTTGATCCTCTCCGGCTGCTTGGTCTACGGCACAGCTGAAACTGATGTAAA  143
            .||  |.|.||     ||||.||||||.||.||.||||||||.||||||.||||.|||      ||||||||||
Sbjct   75  CGG--CGGCGCCACATGGCTGCTCTTGGTCGTCGCCGGCTGCGTGGTCTGCGGCTCAG------CTGATGTAAA  140

Query  144  TGTGGTCATGCTTCAGGAATCCCAAGTT--TGTGAAAAGCGTGCCAGCCAACAATTCTGTTACACAAATGTGCT  215
            ||||||||||||||||||||||||||||  |.||||     |.||||.||||||||||||||.|.|||||||||
Sbjct  141  TGTGGTCATGCTTCAGGAATCCCAAGTTGATATGAA-----TTCCAGTCAACAATTCTGTTATAAAAATGTGCT  209

Query  216  TATCCCAAAATGGCATGATATATGGACACGGATACAGATCCGAGTAAATAGTTCCAGATTGGTTCGAGTCACCC  289
            |||||||||.|||||||||||||||||||||||||||.|.||.|||||||||||||..|||||.|||||.||||
Sbjct  210  TATCCCAAAGTGGCATGATATATGGACACGGATACAGGTTCGGGTAAATAGTTCCAAGTTGGTCCGAGTTACCC  283

Query  290  AGGTGGAGAATGAGGAGAAACTGAAGGAGCTAGAGCA-------------------------------------  326
            |||||||.|||||||||||.|||||||||||||||||                                     
Sbjct  284  AGGTGGACAATGAGGAGAAGCTGAAGGAGCTAGAGCAGTTTAGTATCTGGAACTTTTTTTCTTCTTTTTTAAAA  357

Query  327  --------------------------------------------------------------------------  326
                                                                                      
Sbjct  358  GAGAAATTGAATGACACCTATGTTAACGTGGGTCTGTACAGCACTAAAACCTGCCTCAAGGTTGAGATGATAGA  431

Query  327  --------------------------------------------------------------------------  326
                                                                                      
Sbjct  432  GAAGGACACCACGTACAGTGTCACTGTGACCCGGAGATTTGACCCCAAACTCTTCCTTGTTTTCCTCCTCGGAC  505

Query  327  ----------------------------------AAGTCAAATTTTCTACTACTCTACTGGGATGACTGTGGGA  366
                                              .|||||||||||||||||.||.||||||||||.|||||||
Sbjct  506  TGACACTGTTTTTTTGTGGAGACTTGTTGAGCAGGAGTCAAATTTTCTACTATTCCACTGGGATGAGTGTGGGA  579

Query  367  ATTGTGGCCTCTCTGCTAATCATCATTTTTATACTATCTAAGTTTATGCCTAAGAAAAGTCCCATTTACGTCAT  440
            ||.|||||||||||..|||||.||||||||||..|.||||||||||||||.||||.|||.||||||||||||||
Sbjct  580  ATCGTGGCCTCTCTCTTAATCGTCATTTTTATGATCTCTAAGTTTATGCCCAAGAGAAGCCCCATTTACGTCAT  653

Query  441  CCTGGTGGGAGGCTGGTCTTTTTCTCTGTACCTCATTCAACTAGTTTTTAAAAATTTACAAGAGATCTGGAGGT  514
            ||||||.|||||||||||.||.|||||||||||||||||.|||||||||||.||||||||.|||||.||||||.
Sbjct  654  CCTGGTAGGAGGCTGGTCCTTCTCTCTGTACCTCATTCAGCTAGTTTTTAAGAATTTACAGGAGATATGGAGGA  727

Query  515  GTTACTGGCAGTATCTTTTAAGTTATGTCCTCACAGTTGGATTCATGAGTTTTGCAGTATGTTACAAGTATGGG  588
            ||||||||||.||||||.||||.||..|||||||||||||||||||||||||||||||.||.|||||.||||||
Sbjct  728  GTTACTGGCATTATCTTCTAAGCTACATCCTCACAGTTGGATTCATGAGTTTTGCAGTGTGCTACAAATATGGG  801

Query  589  CCCTTGGAGAATGAACGAAGTATCAACCTGCTGACCTGGACCTTGCAGCTGATGGGCCTGTGTTTCATGTATTC  662
            |||.||||.|||||||||||.||.|||||||||||||||||..||||||||.||||||||.|..||||||||||
Sbjct  802  CCCCTGGAAAATGAACGAAGCATTAACCTGCTGACCTGGACGCTGCAGCTGCTGGGCCTGGGACTCATGTATTC  875

Query  663  TGGCATCCAGATACCACATATTGCCCTTGCCATTATCATCATTGCTCTTTGTACTAAGAACCTGGAACACCCTA  736
            ..|.||||||||.||.||..|||||.||||..|.|||.|||||||.||.||.|||||||||||||||.||||||
Sbjct  876  CAGTATCCAGATCCCGCACGTTGCCTTTGCTCTCATCGTCATTGCACTGTGCACTAAGAACCTGGAATACCCTA  949

Query  737  TTCAGTGGCTGTACATCACCTGCAGAAAGGTGTGTAAGGGAGCAGAAAAGCCTGTTCCCCCTCGTCTCCTGACA  810
            |.||.|||||||.||.|||||.|||.                                                
Sbjct  950  TCCACTGGCTGTGCAGCACCTACAGG------------------------------------------------  975

Query  811  GAAGAAGAATATCGGATACAAGGAGAGGTAGAAACCCGAAAGGCTTTAGAGGAGCTCCGAGAATTTTGTAACAG  884
                                                                                      
Sbjct  976  --------------------------------------------------------------------------  975

Query  885  TCCAGACTGCTCTGCTTGGAAGACTGTTTCTCGAATCCAGTCTCCAAAAAGATTTGCTGACTTTGTGGAAGGCT  958
                                                                                      
Sbjct  976  --------------------------------------------------------------------------  975

Query  959  CTTCCCACCTCACGCCAAATGAAGTTTCTGTCCATGAGCAGGAGTATGGATTAGGGAGCATTATTGCCCAGGAT  1032
                                                                                      
Sbjct  976  --------------------------------------------------------------------------  975

Query 1033  GAAATCTATGAGGAAGCATCCTCTGAGGAGGAGGACTCATATTCTCGGTGTCCTGCTATCACACAGAACAACTT  1106
                                                                                      
Sbjct  976  --------------------------------------------------------------------------  975

Query 1107  TCTAACC  1113
                   
Sbjct  976  -------  975