Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_02752
- Subject:
- NM_001302693.1
- Aligned Length:
- 2315
- Identities:
- 399
- Gaps:
- 1912
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCACAGGAGTGGCCGTTATGGAACGCAGCAGCGTGCAGGGTCAAAGACAGCCGGCCCCCCATGTCAGTGGTC 74
Query 1 ----ATGGCCAGTGAAGGCACCAACATCCCAAGTCCTGTGGTGCGCCAGATTGACAAGCAGTTTCTGATTTGCA 70
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 TAGGATGGCCAGTGAAGGCACCAACATCCCAAGTCCTGTGGTGCGCCAGATTGACAAGCAGTTTCTGATTTGCA 148
Query 71 GTATATGCCTGGAACGGTACAAGAATCCCAAGGTTCTCCCCTGTCTGCACACTTTCTGCGAGAGGTGCCTGCAG 144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GTATATGCCTGGAACGGTACAAGAATCCCAAGGTTCTCCCCTGTCTGCACACTTTCTGCGAGAGGTGCCTGCAG 222
Query 145 AACTACATTCCTGCCCACAGTTTAACCCTCTCCTGCCCAGTGTGCCGCCAGACCTCCATCCTGCCCGAGAAAGG 218
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 AACTACATTCCTGCCCACAGTTTAACCCTCTCCTGCCCAGTGTGCCGCCAGACCTCCATCCTGCCCGAGAAAGG 296
Query 219 GGTGGCCGCGCTCCAGAACAATTTCTTCATCACAAACCTGATGGACGTGCTGCAGCGAACTCCAGGCAGCAACG 292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GGTGGCCGCGCTCCAGAACAATTTCTTCATCACAAACCTGATGGACGTGCTGCAGCGAACTCCAGGCAGCAACG 370
Query 293 CTGAGGAGTCTTCCATCCTGGAGACAGTCACTGCTGTGGCTGCGGGAAAGCCTCTCTCTTGCCCAAACCACGAT 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CTGAGGAGTCTTCCATCCTGGAGACAGTCACTGCTGTGGCTGCGGGAAAGCCTCTCTCTTGCCCAAACCACGAT 444
Query 367 GGGAATGT-----GATGGAATTTTACTGCCAGTCCTGTGAGACTGCCATGTGTCGGGAGTGCACGGAGGGGGAG 435
|||||||| |.|||.| ||.|| ||.|||||| ||||| |||
Sbjct 445 GGGAATGTAAGTGGCTGGGA------TGGCA-------GATACTGCC------CGGGA--GCA----------- 486
Query 436 CACGCAGAGCACCCCACAGTTCCACTCAAGGATGTGGTGGAACAGCACAAGGCCTCGCTCCAGGTCCAGCTGGA 509
Sbjct 487 -------------------------------------------------------------------------- 486
Query 510 TGCTGTCAACAAAAGGCTCCCAGAAATAGATTCTGCTCTTCAGTTCATCTCTGAAATCATTCATCAGTTAACCA 583
Sbjct 487 -------------------------------------------------------------------------- 486
Query 584 ACCAAAAGGCCAGCATCGTGGATGACATTCATTCCACCTTTGATGAGCTCCAGAAGACTTTAAATGTGCGCAAG 657
Sbjct 487 -------------------------------------------------------------------------- 486
Query 658 AGTGTGCTGCTTATGGAATTGGAGGTCAACTATGGCCTCAAACACAAAGTCCTCCAGTCGCAGCTGGATACTCT 731
Sbjct 487 -------------------------------------------------------------------------- 486
Query 732 GCTCCAGGGGCAGGAGAGCATTAAGAGCTGCAGCAACTTCACAGCGCAGGCCCTCAACCATGGCACGGAGACCG 805
Sbjct 487 -------------------------------------------------------------------------- 486
Query 806 AGGTCCTACTGGTGAAGAAGCAGATGAGCGAGAAGCTGAACGAGCTGGCCGACCAGGACTTCCCCTTGCACCCG 879
Sbjct 487 -------------------------------------------------------------------------- 486
Query 880 CGGGAGAACGACCAGCTGGATTTCATCGTGGAAACCGAGGGGCTGAAGAAGTCCATCCACAACCTCGGGACGAT 953
Sbjct 487 -------------------------------------------------------------------------- 486
Query 954 CTTAACCACCAACGCCGTTGCCTCAGAGACAGTGGCCACGGGCGAGGGGCTGCGGCAGACCATCATCGGGCAGC 1027
Sbjct 487 -------------------------------------------------------------------------- 486
Query 1028 CCATGTCCGTCACCATCACCACCAAGGACAAAGACGGTGAGCTGTGCAAAACCGGCAACGCCTACCTCACCGCC 1101
Sbjct 487 -------------------------------------------------------------------------- 486
Query 1102 GAACTGAGCACCCCCGACGGGAGCGTGGCAGACGGGGAGATCCTGGACAACAAGAACGGCACCTATGAGTTTTT 1175
Sbjct 487 -------------------------------------------------------------------------- 486
Query 1176 GTACACTGTCCAGAAGGAAGGGGACTTTACCCTGTCTCTGAGACTCTATGACCAGCACATCCGAGGCAGCCCGT 1249
Sbjct 487 -------------------------------------------------------------------------- 486
Query 1250 TTAAGCTGAAAGTGATCCGATCCGCTGATGTGTCTCCCACCACAGAAGGCGTGAAGAGGCGCGTTAAGTCCCCG 1323
Sbjct 487 -------------------------------------------------------------------------- 486
Query 1324 GGGAGCGGCCACGTCAAGCAGAAAGCTGTGAAAAGACCCGCAAGCATGTACAGCACTGGAAAACGAAAAGAGAA 1397
Sbjct 487 -------------------------------------------------------------------------- 486
Query 1398 TCCCATCGAAGACGATTTGATCTTTCGAGTGGGTACCAAAGGAAGAAATAAAGGAGAGTTTACAAATCTTCAGG 1471
Sbjct 487 -------------------------------------------------------------------------- 486
Query 1472 GGGTAGCTGCATCTACAAATGGAAAGATATTAATTGCAGACAGTAACAACCAATGTGTGCAGATATTTTCCAAT 1545
Sbjct 487 -------------------------------------------------------------------------- 486
Query 1546 GATGGCCAGTTCAAAAGTCGTTTTGGCATACGGGGACGCTCTCCGGGGCAGCTGCAGCGGCCCACAGGAGTGGC 1619
Sbjct 487 -------------------------------------------------------------------------- 486
Query 1620 TGTACATCCCAGTGGGGACATAATCATTGCCGATTATGATAATAAATGGGTCAGCATTTTCTCCTCCGATGGGA 1693
Sbjct 487 -------------------------------------------------------------------------- 486
Query 1694 AATTTAAGACAAAAATTGGATCAGGAAAGCTGATGGGACCCAAAGGAGTTTCTGTGGACCGCAATGGGCACATT 1767
Sbjct 487 -------------------------------------------------------------------------- 486
Query 1768 ATTGTTGTGGACAACAAGGCGTGCTGCGTGTTTATCTTCCAGCCAAACGGGAAAATAGTCACCAGGTTTGGTAG 1841
Sbjct 487 -------------------------------------------------------------------------- 486
Query 1842 CCGAGGAAATGGGGACAGGCAGTTTGCAGGTCCCCATTTTGCAGCTGTAAATAGCAATAATGAGATTATTATTA 1915
Sbjct 487 -------------------------------------------------------------------------- 486
Query 1916 CAGATTTCCATAATCATTCTGTCAAGGTGTTTAATCAGGAAGGAGAATTCATGTTGAAGTTTGGCTCAAATGGA 1989
Sbjct 487 -------------------------------------------------------------------------- 486
Query 1990 GAAGGAAATGGGCAGTTTAATGCTCCAACAGGTGTAGCAGTGGATTCAAATGGAAACATCATTGTGGCCGACTG 2063
Sbjct 487 -------------------------------------------------------------------------- 486
Query 2064 GGGAAACAGCAGGATCCAGGTTTTTGATGGGAGTGGATCATTTTTGTCCTACATTAACACATCTGCTGACCCAC 2137
Sbjct 487 -------------------------------------------------------------------------- 486
Query 2138 TCTATGGCCCCCAAGGCCTGGCCCTAACTTCAGATGGTCATGTTGTGGTTGCAGACTCTGGAAATCACTGTTTC 2211
Sbjct 487 -------------------------------------------------------------------------- 486
Query 2212 AAAGTCTATCGATACTTACAG 2232
Sbjct 487 --------------------- 486
