Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_02752
Subject:
XM_011240297.2
Aligned Length:
2310
Identities:
2030
Gaps:
78

Alignment

Query    1  ------------------------------------------------------------------ATGGCCAG  8
                                                                              ||||||||
Sbjct    1  ATGGGCACATGGGAAGGGCAGCGTGCAGGGTCGAGGACAGCCGGCCCCCCATGTCAGTGGTCTAGGATGGCCAG  74

Query    9  TGAAGGCACCAACATCCCAAGTCCTGTGGTGCGCCAGATTGACAAGCAGTTTCTGATTTGCAGTATATGCCTGG  82
            |||.|||.|||.||||||||||||.||||||||||||||||||||||||||||||||.||||||||||||||||
Sbjct   75  TGAGGGCGCCAGCATCCCAAGTCCCGTGGTGCGCCAGATTGACAAGCAGTTTCTGATCTGCAGTATATGCCTGG  148

Query   83  AACGGTACAAGAATCCCAAGGTTCTCCCCTGTCTGCACACTTTCTGCGAGAGGTGCCTGCAGAACTACATTCCT  156
            |||||||||||||.||||||||.||.||||||||||||||||||||||||||||||||||||||||||||.||.
Sbjct  149  AACGGTACAAGAACCCCAAGGTCCTGCCCTGTCTGCACACTTTCTGCGAGAGGTGCCTGCAGAACTACATCCCA  222

Query  157  GCCCACAGTTTAACCCTCTCCTGCCCAGTGTGCCGCCAGACCTCCATCCTGCCCGAGAAAGGGGTGGCCGCGCT  230
            ||||||||||||||||||||||||||.|||||.||||||||.|||||||||||||||||||||||||||||.||
Sbjct  223  GCCCACAGTTTAACCCTCTCCTGCCCGGTGTGTCGCCAGACATCCATCCTGCCCGAGAAAGGGGTGGCCGCACT  296

Query  231  CCAGAACAATTTCTTCATCACAAACCTGATGGACGTGCTGCAGCGAACTCCAGGCAGCAACGCTGAGGAGTCTT  304
            .||||||||.|||||.|||||.|||||.|||||.|||||||||||.||.|||||||||||||..|||||.||||
Sbjct  297  TCAGAACAACTTCTTTATCACGAACCTCATGGATGTGCTGCAGCGGACGCCAGGCAGCAACGGCGAGGACTCTT  370

Query  305  CCATCCTGGAGACAGTCACTGCTGTGGCTGCGGGAAAGCCTCTCTCTTGCCCAAACCACGATGGGAATGTGATG  378
            |||||||||||||.|||||.|||||||||||.|||||||||||.||.|||||||||||.|||||.|||||||||
Sbjct  371  CCATCCTGGAGACGGTCACCGCTGTGGCTGCAGGAAAGCCTCTTTCGTGCCCAAACCATGATGGAAATGTGATG  444

Query  379  GAATTTTACTGCCAGTCCTGTGAGACTGCCATGTGTCGGGAGTGCACGGAGGGGGAGCACGCAGAGCACCCCAC  452
            ||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||.|||||||||||
Sbjct  445  GAATTTTACTGCCAGTCCTGTGAGACCGCCATGTGTCGGGAGTGCACGGAGGGGGAGCACGCGGAGCACCCCAC  518

Query  453  AGTTCCACTCAAGGATGTGGTGGAACAGCACAAGGCCTCGCTCCAGGTCCAGCTGGATGCTGTCAACAAAAGGC  526
            |||.||.||.||||||||||||||.||||||||||||||||||||||||||||||||.||.|||||||||||.|
Sbjct  519  AGTCCCGCTGAAGGATGTGGTGGAGCAGCACAAGGCCTCGCTCCAGGTCCAGCTGGACGCAGTCAACAAAAGAC  592

Query  527  TCCCAGAAATAGATTCTGCTCTTCAGTTCATCTCTGAAATCATTCATCAGTTAACCAACCAAAAGGCCAGCATC  600
            ||||||||||||||||||||||||||||||||||.||||||||.|||||||||||||||||||||||||||||.
Sbjct  593  TCCCAGAAATAGATTCTGCTCTTCAGTTCATCTCAGAAATCATCCATCAGTTAACCAACCAAAAGGCCAGCATT  666

Query  601  GTGGATGACATTCATTCCACCTTTGATGAGCTCCAGAAGACTTTAAATGTGCGCAAGAGTGTGCTGCTTATGGA  674
            |||||||||||.||.|||||||||||||||||.|||||||||||||||||.||||||||.||||||||.|||||
Sbjct  667  GTGGATGACATCCACTCCACCTTTGATGAGCTGCAGAAGACTTTAAATGTTCGCAAGAGCGTGCTGCTCATGGA  740

Query  675  ATTGGAGGTCAACTATGGCCTCAAACACAAAGTCCTCCAGTCGCAGCTGGATACTCTGCTCCAGGGGCAGGAGA  748
            .|||||||||||||||||.||||||||||||||.||.|||||||||||||||||.||||||||.||.|||||.|
Sbjct  741  GTTGGAGGTCAACTATGGTCTCAAACACAAAGTGCTGCAGTCGCAGCTGGATACCCTGCTCCAAGGCCAGGAAA  814

Query  749  GCATTAAGAGCTGCAGCAACTTCACAGCGCAGGCCCTCAACCATGGCACGGAGACCGAGGTCCTACTGGTGAAG  822
            |||||||||||||||||||||||||.||.||||||||||||||||||||||||||.|||||.||.|||||||||
Sbjct  815  GCATTAAGAGCTGCAGCAACTTCACGGCTCAGGCCCTCAACCATGGCACGGAGACGGAGGTGCTGCTGGTGAAG  888

Query  823  AAGCAGATGAGCGAGAAGCTGAACGAGCTGGCCGACCAGGACTTCCCCTTGCACCCGCGGGAGAACGACCAGCT  896
            ||||||||||||||||||||||||||.|||||.||||||||||||||..||||||||||.||||||||||||||
Sbjct  889  AAGCAGATGAGCGAGAAGCTGAACGAACTGGCGGACCAGGACTTCCCACTGCACCCGCGCGAGAACGACCAGCT  962

Query  897  GGATTTCATCGTGGAAACCGAGGGGCTGAAGAAGTCCATCCACAACCTCGGGACGATCTTAACCACCAACGCCG  970
            ||||||.|||||||||||.|||||.|||||||||||.|||||||||||.|||||.|||.|.|||||.|||||.|
Sbjct  963  GGATTTTATCGTGGAAACGGAGGGACTGAAGAAGTCTATCCACAACCTGGGGACCATCCTCACCACTAACGCGG  1036

Query  971  TTGCCTCAGAGACAGTGGCCACGGGCGAGGGGCTGCGGCAGACCATCATCGGGCAGCCCATGTCCGTCACCATC  1044
            |.|||||.|||||.|||||||||||.|||||||||||||||||||||||||||||||||||||||||.||.||.
Sbjct 1037  TCGCCTCTGAGACGGTGGCCACGGGGGAGGGGCTGCGGCAGACCATCATCGGGCAGCCCATGTCCGTTACTATA  1110

Query 1045  ACCACCAAGGACAAAGACGGTGAGCTGTGCAAAACCGGCAACGCCTACCTCACCGCCGAACTGAGCACCCCCGA  1118
            ||||||||||||||||||||.|||||||||||.||.||||||||.|||||||||||.||.||.||||||||.||
Sbjct 1111  ACCACCAAGGACAAAGACGGAGAGCTGTGCAAGACAGGCAACGCATACCTCACCGCTGAGCTCAGCACCCCGGA  1184

Query 1119  CGGGAGCGTGGCAGACGGGGAGATCCTGGACAACAAGAACGGCACCTATGAGTTTTTGTACACTGTCCAGAAGG  1192
            |||.||||||||.|||||.|||||||||||||||||||||||||||||.|||||.|||||.|||||.|||||||
Sbjct 1185  CGGCAGCGTGGCCGACGGAGAGATCCTGGACAACAAGAACGGCACCTACGAGTTCTTGTATACTGTGCAGAAGG  1258

Query 1193  AAGGGGACTTTACCCTGTCTCTGAGACTCTATGACCAGCACATCCGAGGCAGCCCGTTTAAGCTGAAAGTGATC  1266
            |.||||||||.||||||||.||.||.|||||.||||||||.|||||||||||||||||||||||.||.||.|||
Sbjct 1259  AGGGGGACTTCACCCTGTCCCTCAGGCTCTACGACCAGCATATCCGAGGCAGCCCGTTTAAGCTCAAGGTCATC  1332

Query 1267  CGATCCGCTGATGTGTCTCCCACCACAGAAGGCGTGAAGAGGCGCGTTAAGTCCCCGGGGAGCGGCCACGTCAA  1340
            ||.||.||.||.|||||.||||||||.||.|||||||||.|.||.||.|||||||||||||||||.||||||||
Sbjct 1333  CGCTCTGCCGACGTGTCCCCCACCACCGAGGGCGTGAAGCGACGAGTCAAGTCCCCGGGGAGCGGGCACGTCAA  1406

Query 1341  GCAGAAAGCTGTGAAAAGACCCGCAAGCATGTACAGCACTGGAAAACGAAAAGAGAATCCCATCGAAGACGATT  1414
            ||||||.||||||||.|||||.||.||||||||||||||.||.||.|||||||||||.||||||||.|||||..
Sbjct 1407  GCAGAAGGCTGTGAAGAGACCTGCCAGCATGTACAGCACCGGCAAGCGAAAAGAGAACCCCATCGAGGACGACC  1480

Query 1415  TGATCTTTCGAGTGGGTACCAAAGGAAGAAATAAAGGAGAGTTTACAAATCTTCAGGGGGTAGCTGCATCTACA  1488
            |||||||.|||||.|||||||||||||||||.||||||||.||||||||.||.|||||.||.||||||||||||
Sbjct 1481  TGATCTTCCGAGTCGGTACCAAAGGAAGAAACAAAGGAGAATTTACAAACCTGCAGGGTGTGGCTGCATCTACA  1554

Query 1489  AATGGAAAGATATTAATTGCAGACAGTAACAACCAATGTGTGCAGATATTTTCCAATGATGGCCAGTTCAAAAG  1562
            |.|||||||||||||||||||||.|||||||||||.|||||||||||.||||||||||||||.|||||||||||
Sbjct 1555  AGTGGAAAGATATTAATTGCAGATAGTAACAACCAGTGTGTGCAGATCTTTTCCAATGATGGACAGTTCAAAAG  1628

Query 1563  TCGTTTTGGCATACGGGGACGCTCTCCGGGGCAGCTGCAGCGGCCCACAGGAGTGGCTGTACATCCCAGTGGGG  1636
            ||||||.|||||.||.|||||.||.||.||.|||||.|||||||||||.||.||.||.||.||.||||||||||
Sbjct 1629  TCGTTTCGGCATCCGAGGACGATCACCCGGACAGCTCCAGCGGCCCACGGGGGTAGCGGTGCACCCCAGTGGGG  1702

Query 1637  ACATAATCATTGCCGATTATGATAATAAATGGGTCAGCATTTTCTCCTCCGATGGGAAATTTAAGACAAAAATT  1710
            ||||.||||||||.||||||||.||.||.|||||.||||||||||||...||||||||.|||||||||||||||
Sbjct 1703  ACATCATCATTGCAGATTATGACAACAAGTGGGTTAGCATTTTCTCCAATGATGGGAAGTTTAAGACAAAAATT  1776

Query 1711  GGATCAGGAAAGCTGATGGGACCCAAAGGAGTTTCTGTGGACCGCAATGGGCACATTATTGTTGTGGACAACAA  1784
            |||||||||||.||||||||.|||||||||||||||||||||||||||||||||||||||||.|||||||||||
Sbjct 1777  GGATCAGGAAAACTGATGGGGCCCAAAGGAGTTTCTGTGGACCGCAATGGGCACATTATTGTGGTGGACAACAA  1850

Query 1785  GGCGTGCTGCGTGTTTATCTTCCAGCCAAACGGGAAAATAGTCACCAGGTTTGGTAGCCGAGGAAATGGGGACA  1858
            |||||||||.|||||||||||||||||.||||||||||||||||||||||||||||||||||||||.|||||||
Sbjct 1851  GGCGTGCTGTGTGTTTATCTTCCAGCCCAACGGGAAAATAGTCACCAGGTTTGGTAGCCGAGGAAACGGGGACA  1924

Query 1859  GGCAGTTTGCA------------GGTCCCCATTTTGCAGCTGTAAATAGCAATAATGAGATTATTATTACAGAT  1920
            |||||||||||            ||||||||.|||||||||||.|||||||||||||||||.||.|||||||||
Sbjct 1925  GGCAGTTTGCAGGTACACTCGATGGTCCCCACTTTGCAGCTGTGAATAGCAATAATGAGATCATCATTACAGAT  1998

Query 1921  TTCCATAATCATTCTGTCAAGGTGTTTAATCAGGAAGGAGAATTCATGTTGAAGTTTGGCTCAAATGGAGAAGG  1994
            |||||||||||.|||||||||||.||||||||||||||||||||||||||||||||||||||.|||||||||||
Sbjct 1999  TTCCATAATCACTCTGTCAAGGTATTTAATCAGGAAGGAGAATTCATGTTGAAGTTTGGCTCCAATGGAGAAGG  2072

Query 1995  AAATGGGCAGTTTAATGCTCCAACAGGTGTAGCAGTGGATTCAAATGGAAACATCATTGTGGCCGACTGGGGAA  2068
            ||||||||||||||||||.|||||||||||.||.|||||.||||||||.||||||||||||||.||||||||.|
Sbjct 2073  AAATGGGCAGTTTAATGCACCAACAGGTGTGGCCGTGGACTCAAATGGGAACATCATTGTGGCTGACTGGGGGA  2146

Query 2069  ACAGCAGGATCCAGGTTTTTGATGGGAGTGGATCATTTTTGTCCTACATTAACACATCTGCTGACCCACTCTAT  2142
            ||||||||||||||||||||||||||||||||||||||||||||||.||.|||||||||||||||||.||||||
Sbjct 2147  ACAGCAGGATCCAGGTTTTTGATGGGAGTGGATCATTTTTGTCCTATATCAACACATCTGCTGACCCGCTCTAT  2220

Query 2143  GGCCCCCAAGGCCTGGCCCTAACTTCAGATGGTCATGTTGTGGTTGCAGACTCTGGAAATCACTGTTTCAAAGT  2216
            ||||||||.||||||||.||.|||||||||||.||||||||||||||||||||.|||||.|||||||||||.||
Sbjct 2221  GGCCCCCAGGGCCTGGCTCTCACTTCAGATGGCCATGTTGTGGTTGCAGACTCCGGAAACCACTGTTTCAAGGT  2294

Query 2217  CTATCGATACTTACAG  2232
            |||.||.|||||||||
Sbjct 2295  CTACCGGTACTTACAG  2310

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