Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_02790
Subject:
XM_017316812.1
Aligned Length:
1214
Identities:
1050
Gaps:
91

Alignment

Query    1  -------------------------------------------------------------------ATGGAGA  7
                                                                               |||||..
Sbjct    1  ATGTCATCAGATTCCATGGACCAGCCCAGGAACCCCTGCGAGAACGAGCCACTGACCCCGGGTTATCATGGATT  74

Query    8  AAAAGAAA---ATGGTAACTCAGGGTAACCAGGAGCCGACAACAACTCCTGACGCAATGGTTCAGCCTTTTACT  78
            ...||.||   ||||    .|||||||||||||||||.||||||||||||||||||||||||||||||||||||
Sbjct   75  CCCAGCAAGGGATGG----CCAGGGTAACCAGGAGCCAACAACAACTCCTGACGCAATGGTTCAGCCTTTTACT  144

Query   79  ACCATCCCATTTCCACCACCTCCGCAGAATGGAATTCCCACAGAGTATGGGGTGCCACACACTCAAGACTATGC  152
            ||||||||.||.|||||||||||.||.|||||||||||||||||.|||||.||||||||||||||.||||||||
Sbjct  145  ACCATCCCGTTCCCACCACCTCCACAAAATGGAATTCCCACAGAATATGGAGTGCCACACACTCAGGACTATGC  218

Query  153  CGGCCAGACCGGTGAGCATAACCTGACACTCTACGGAAGTACGCAAGCC-CACGGGGAGCAGAGCAGCAACTCA  225
            ||||||||||.||||.|||||||||||.||||||||.||||||| |||| ||.||.||.|||||.|||||.|||
Sbjct  219  CGGCCAGACCAGTGAACATAACCTGACCCTCTACGGGAGTACGC-AGCCTCATGGAGAACAGAGTAGCAATTCA  291

Query  226  CCCAGCACACAAAATGGATCTCTTAC---GACAGAAGGTGGAGCACAGACAGACGGCCAGCAGTCACAGACACA  296
            |||||||..||.|||||||||||.||   |||||||||||||||||||||||||||.||.||||||||||||||
Sbjct  292  CCCAGCAACCAGAATGGATCTCTCACGCAGACAGAAGGTGGAGCACAGACAGACGGACAACAGTCACAGACACA  365

Query  297  AAGTAGTGAAAATTCAGAGAGTAAATCTACCCCGAAACGGCTGCATGTCTCTAATATTCCTTTCCGCTTCCGGG  370
            ||||||||||||||||||||||||||||||.||.||.||.||.|||||||||||||||||.|||||||||||.|
Sbjct  366  AAGTAGTGAAAATTCAGAGAGTAAATCTACGCCCAAGCGACTACATGTCTCTAATATTCCCTTCCGCTTCCGAG  439

Query  371  ACCCTGACCTCCGGCAGATGTTTGGGCAGTTTGGCAAAATCCTAGATGTAGAAATAATCTTTAATGAACGTGGC  444
            |||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||.||.|||
Sbjct  440  ACCCTGACCTCCGGCAGATGTTTGGGCAGTTTGGCAAAATCCTAGATGTGGAAATAATCTTTAATGAGCGCGGC  513

Query  445  TCTAAGGGATTCGGGTTCGTAACTTTCGAGAATAGTGCTGATGCAGACAGGGCCAGGGAGAAATTACACGGCAC  518
            ||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||
Sbjct  514  TCCAAGGGATTCGGGTTCGTAACTTTCGAGAATAGTGCTGATGCAGACAGGGCCAGGGAGAAATTGCACGGCAC  587

Query  519  CGTGGTAGAGGGCCGTAAAATCGAGGTGAATAATGCTACAGCACGTGTAATGACCAATAAGAAGATGGTCACAC  592
            ||||||||||||||||||||||||||||||||||||.||||||||.||.||||||||.||||||||||||||.|
Sbjct  588  CGTGGTAGAGGGCCGTAAAATCGAGGTGAATAATGCAACAGCACGGGTCATGACCAACAAGAAGATGGTCACGC  661

Query  593  CATATGCAAATGGTTGGAAATTAAGCCCAGTAGTTGGAGCTGTATATGGTCCGGAGTTATATGCAGCATCCAGC  666
            |||||||||||||.|||||.|||||||||||||||||||||||.||||||||.|||||||||||||||||||||
Sbjct  662  CATATGCAAATGGCTGGAAGTTAAGCCCAGTAGTTGGAGCTGTGTATGGTCCTGAGTTATATGCAGCATCCAGC  735

Query  667  TTTCAAGCAGATGTGTCCCTAGGCAATGATGCAGCAGTGCCCCTATCAGGAAGAGGGGGTATCAACACTTACAT  740
            ||||||||.||||||||||||||||||||.||.||.||||||.|.|||||||||||.||.||||||||||||||
Sbjct  736  TTTCAAGCTGATGTGTCCCTAGGCAATGAGGCGGCTGTGCCCTTGTCAGGAAGAGGAGGCATCAACACTTACAT  809

Query  741  TCCTTTAATCAGTCTCCCTTTAGTTCCTGGCTTCCCTTACCCTACTGCAGCCACCACGGCAGCCGCTTTCAGAG  814
            .|||.||||||            |||||||||||||||||||.||||||||||||||||||||.||||||.|||
Sbjct  810  CCCTCTAATCA------------TTCCTGGCTTCCCTTACCCAACTGCAGCCACCACGGCAGCTGCTTTCCGAG  871

Query  815  GAGCCCATTTGAGGGGCAGAGGGCGGACAGTATATGGTGCAGTCCGAGCGGTACCTCCAACAGCCATCCCCGCC  888
            ||||||||.||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||
Sbjct  872  GAGCCCATCTGAGGGGCAGAGGGCGGACAGTGTATGGTGCAGTCCGAGCGGTACCTCCAACAGCCATCCCCGCC  945

Query  889  TATCCAGGTGTGGTTTACCAGGACGGATTTTACGGTGCTGACCTCTATGGTGGATATGCAGCCTACAGATATGC  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  946  TATCCAGGTGTGGTTTACCAGGACGGATTTTACGGTGCTGACCTCTATGGTGGATATGCAGCCTACAGATATGC  1019

Query  963  ACAGCCTGCTACTGCAACCGCAGCCACCGCTGCTGCAGCCGCTGCAGCCGCTTACAGTGACGGTTATGGCAGGG  1036
            |||||||||||||||||||||||||||.|||||||||||||||||||||||||||||.||||||||.|||||||
Sbjct 1020  ACAGCCTGCTACTGCAACCGCAGCCACAGCTGCTGCAGCCGCTGCAGCCGCTTACAGCGACGGTTACGGCAGGG  1093

Query 1037  TGTACACAGCCGACCCCTACCATGCCCTTGCCCCTGCCGCTAGCTATGGAGTTGGCGCTGTGGCGAGTTTATAC  1110
            ||||||||||.|||||||||||||||||.|||||||||||.|||||||||||||||||||||||||||||.|||
Sbjct 1094  TGTACACAGCTGACCCCTACCATGCCCTCGCCCCTGCCGCCAGCTATGGAGTTGGCGCTGTGGCGAGTTTGTAC  1167

Query 1111  CGAGGTGGCTACAGCCGATTTGCCCCCTAC  1140
            ||||||||||||||||||||||||||||||
Sbjct 1168  CGAGGTGGCTACAGCCGATTTGCCCCCTAC  1197

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