Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_02816
Subject:
NR_073525.3
Aligned Length:
3452
Identities:
1389
Gaps:
2063

Alignment

Query    1  ----------------------------------------------------ATGGGCTGGATCACAGAAGATC  22
                                                                ||||||||||||||||||||||
Sbjct    1  GTCATTCGAGGTCCGGGTCCGGCTTGCGGGGTCAGCGAACTGGAGAGGCGCCATGGGCTGGATCACAGAAGATC  74

Query   23  TTATTAGACGGAATGCTGAACACAACGACTGTGTCATTTTTTCCCTGGAGGAACTCTCGTTGCATCAGCAAGAA  96
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  TTATTAGACGGAATGCTGAACACAACGACTGTGTCATTTTTTCCCTGGAGGAACTCTCGTTGCATCAGCAAGAA  148

Query   97  ATAGAAAGACTAGAACACATTGATAAATGGTGCCGGGATTTAAAAATTCTCTATCTTCAAAATAATCTTATTGG  170
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  ATAGAAAGACTAGAACACATTGATAAATGGTGCCGGGATTTAAAAATTCTCTATCTTCAAAATAATCTTATTGG  222

Query  171  GAAAATTGAAAATGTTAGCAAACTCAAGAAACTTGAATATTTGAATTTAGCTTTAAACAACATTGAAAAAATAG  244
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GAAAATTGAAAATGTTAGCAAACTCAAGAAACTTGAATATTTGAATTTAGCTTTAAACAACATTGAAAAAATAG  296

Query  245  AAAACTTGGAAGGATGTGAAGAGCTGGCAAAACTTGACCTGACTGTGAATTTCATTGGAGAGCTGAGCAGCATT  318
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  AAAACTTGGAAGGATGTGAAGAGCTGGCAAAACTTGACCTGACTGTGAATTTCATTGGAGAGCTGAGCAGCATT  370

Query  319  AAAAACTTGCAGCACAATATCCATCTGAAGGAGCTCTTTCTCATGGGGAACCCATGTGCTTCCTTTGACCACTA  392
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  AAAAACTTGCAGCACAATATCCATCTGAAGGAGCTCTTTCTCATGGGGAACCCATGTGCTTCCTTTGACCACTA  444

Query  393  TAGGGAGTTCGTGGTAGCAACTCTTCCACAATTAAAGTGGTTGGATGGTAAAGAAATAGAGCCTTCAGAAAGGA  466
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  TAGGGAGTTCGTGGTAGCAACTCTTCCACAATTAAAGTGGTTGGATGGTAAAGAAATAGAGCCTTCAGAAAGGA  518

Query  467  TTAAGGCATTGCAGGACTATTCAGTAATTGAACCACAAATCAGAGAGCAGGAAAAAGATCACTGTCTTAAACGA  540
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  TTAAGGCATTGCAGGACTATTCAGTAATTGAACCACAAATCAGAGAGCAGGAAAAAGATCACTGTCTTAAACGA  592

Query  541  GCCAAACTCAAGGAAGAGGCTCAGAGGAAACACCAAGAAGAGGATAAAAATGAAGACAAGAGAAGTAACGCAGG  614
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  GCCAAACTCAAGGAAGAGGCTCAGAGGAAACACCAAGAAGAGGATAAAAATGAAGACAAGAGAAGTAACGCAGG  666

Query  615  CTTTGATGGACGTTGGTACACAGACATCAATGCTACTCTTTCCTCTTTAGAGAGCAAAGACCACCTACAGGCAC  688
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  CTTTGATGGACGTTGGTACACAGACATCAATGCTACTCTTTCCTCTTTAGAGAGCAAAGACCACCTACAGGCAC  740

Query  689  CAGACACAGAGGAACACAACACAAAGAAATTAGACAACAGTGAAGATGACTTGGAATTCTGGAATAAGCCCTGT  762
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  CAGACACAGAGGAACACAACACAAAGAAATTAGACAACAGTGAAGATGACTTGGAATTCTGGAATAAGCCCTGT  814

Query  763  TTGTTTACTCCTGAATCAAGATTGGAAACTCTTAGACACATGGAAAAACAACGGAAGAAACAGGAAAAATTAAG  836
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  TTGTTTACTCCTGAATCAAGATTGGAAACTCTTAGACACATGGAAAAACAACGGAAGAAACAGGAAAAATTAAG  888

Query  837  TGAAAAAAAGAAGAAAGTGAAACCACCCAGGACTTTGATCACTGAAGATGGGAAAGCCCTAAATGTGAATGAGC  910
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  TGAAAAAAAGAAGAAAGTGAAACCACCCAGGACTTTGATCACTGAAGATGGGAAAGCCCTAAATGTGAATGAGC  962

Query  911  CCAAAATTGACTTCTCTTTGAAAGATAACGAAAAGCAGATCATCCTGGACCTTGCTGTCTATAGGTATATGGAT  984
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  CCAAAATTGACTTCTCTTTGAAAGATAACGAAAAGCAGATCATCCTGGACCTTGCTGTCTATAGGTATATGGAT  1036

Query  985  ACCTCTTTAATCGATGTTGATGTGCAACCAACTTACGTGCGAGTAATGATCAAAGGAAAGCCATTTCAGCTTGT  1058
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         |||||||
Sbjct 1037  ACCTCTTTAATCGATGTTGATGTGCAACCAACTTACGTGCGAGTAATGATCAAAGGAA---------AGCTTGT  1101

Query 1059  CCTTCCTGCAGAAGTGAAACCCGATAGTAGTTCTGCTAAAAGATCTCAGACAACGGGTCATTTGGTCATCTGCA  1132
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1102  CCTTCCTGCAGAAGTGAAACCCGATAGTAGTTCTGCTAAAAGATCTCAGACAACGGGTCATTTGGTCATCTGCA  1175

Query 1133  TGCCCAAGGTAGGAGAAGTAATCACAGGTGGTCAGCGAGCATTCAAATCTATGAAAACTACCTCGGACAGGAGC  1206
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1176  TGCCCAAGGTAGGAGAAGTAATCACAGGTGGTCAGCGAGCATTCAAATCTATGAAAACTACCTCGGACAGGAGC  1249

Query 1207  AGAGAACAAACAAATAC---------------------------------------------------------  1223
            |||||||||||||||||                                                         
Sbjct 1250  AGAGAACAAACAAATACAAGCTATTCTACTGGATTCTAGAGGTGATGTTTCTGACAGTCAGGTCGTGGGTAAGA  1323

Query 1224  ----------------------------------------------------AAGAAGCAAGCACATGGAGAAA  1245
                                                                ||||||||||||||||||||||
Sbjct 1324  CCAGTGATGGGCGTCCGTCCTAGAGGCCTCTGACATTAAGGCGGGGAAAGCAAAGAAGCAAGCACATGGAGAAA  1397

Query 1246  CTAGAAGTAGACCCTAGCAAGCACTCATTCCCTGATGTGACTAACATAGTTCAAGAGAAAAAACACACACCCAG  1319
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1398  CTAGAAGTAGACCCTAGCAAGCACTCATTCCCTGATGTGACTAACATAGTTCAAGAGAAAAAACACACACCCAG  1471

Query 1320  AAGACGACCTGAACCCAAAATTATACCAAGTGAGGAAGACCCAACCTTTGAAGACAACCCTGAAGTGCCTCCGC  1393
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1472  AAGACGACCTGAACCCAAAATTATACCAAGTGAGGAAGACCCAACCTTTGAAGACAACCCTGAAGTGCCTCCGC  1545

Query 1394  TGATT---------------------------------------------------------------------  1398
            |||||                                                                     
Sbjct 1546  TGATTTGAAACATCTGGCTGCGTTGCCATTGGCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCAT  1619

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 1620  ATGCATATTATTCCTGGGATAAACACAGAGTTATTTGTCAATATCGCTGCTCCAGTGTTTTAACTCTTACTTTG  1693

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 1694  CATAGTAATATCCTTAAGATAGCTTAAAATTAAAATGTATGTCTTAAATGCTATAACTCATCATTTACCTATAA  1767

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 1768  TAAAGGGTTGGTATTGAAAATGTTTAGTAAGATCATAGAACTATTGCATAAAACACTGATTATAAATACTGTCT  1841

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 1842  ACTTATGCAAAGTATTAATTCATAGATAAAAGGACTGAGTATTAAATTGGTACTTCAGCAAAGTGGTCAAGCTT  1915

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 1916  AGAAGTTAAAACTGTAATTTCAGACCCAATTGGAATACTTTAATATGATTTTAAACAGCATTTCCATTTTCCTT  1989

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 1990  CCCATGATGTGTCTGCTTTCTCTGGTGGCATGGTATAATGGCAAGAATATGAGTTTTGAAACCAGACACTCTAT  2063

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 2064  ATTTGGATTCCAGCTCAATCACTTTGTAAAGACCTTCAGCAAGTCCTTTAATTCTCTGAGCCTTAGTGGCTTCA  2137

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 2138  TGTATAATCTGGGAATAATAACACTTGCCTCACAGGTTTGTCTCAAGATAAACTGCAGAAAGCACTTAGTACAG  2211

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 2212  TGTCAGCCATACATTTAGAGCCTCTTCTCTCTCTCCTTCTTCCCTTTCTCCTCTCTCTTCTCCTCCCTTTCTCC  2285

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 2286  TGTCTCTCCTCCTCCCTGCTCCTTCTTCCCCTCCCTCCCCAATTACTTTTCTCCCCTTATTCTTTTTCTTCACC  2359

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 2360  TTTTTACTCCCCATCCCACTCCTTCTCCTCTATTTCCTTCTTTACTTTTTTAATATCCTACCTCTTCTTTATCT  2433

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 2434  AGAACATTATGAATTCAATATTTCACATACATTGTAGGACAAATTACTGTTACTCTGATCATGATATAGCAACA  2507

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 2508  TTTAAGTCAGTTTCCCCAAATATTCATTCAACAAATACTTATTGAGCAACTATTGAGTGCTAGCCCCCTCTCTG  2581

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 2582  TTCATCAGGGATTTAGTAGTAACAAAGCAGACAAATACATACACACAGACTATGTCAGGTGGTGTTCAGAGCTG  2655

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 2656  TGAAGGAGAGTCAGAGTGAGGGAATCAAGGGTGATGGGTGCTTTTTCAGACAGGGCCTTTCTCTATTAAACAGG  2729

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 2730  CTTCCAGTGGAAGACTCTGCTAATGTTTAGCAGATAACCAAAATGCATCAGTTAGAAAAAAATATGATGAGAAT  2803

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 2804  GAGGGACTGGTTATAGGAATGCAATTGGGCACAAATGTGGGAAGAGCTGGGTAGTGAAGCTCTAGAAGGGAGAG  2877

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 2878  GTAGAGAATTGGAAGAAGAAGCACTGGTACAGGTAGACAATTCAGAACTTGCACAGAATCTGAGAAGCTGAAGT  2951

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 2952  AGGACTGTGATTGGGAGCTTGTGGAGAGGTCTATGGAAATTATCATGCTGCTGAAATTGTTGCCTCTATTTATC  3025

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 3026  TGCTACCCTTCTGGTCCGTGGCCAAGATCCTGGTGGGTGGGCTTGGAGCCAGCCTTCGTCAGCAGGCCTGCGGT  3099

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 3100  AAGAAAGATGGGATGGACACACAGTGGTGGAGATCAAGGATCAGCTGCAGCAGGCTGGGTCCCTCTGCATCTGT  3173

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 3174  CCATCACTGCGACTGATGGCAATGACTGAGTATAACACCTTTCTTCATGGTCAACTCTACCCAGGAACCACGTA  3247

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 3248  GGGAAGGAAATTCTGGAAAACAGCTCCCAGCCTTAGCCAACTTGACATATCATAATCCAACAGAACTCAACCTC  3321

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 3322  TACCAACTTGGAAATCATGTACATTTGTCAGGACTGTATTTAATTTCCACATAGAGAGAAAGCAAAATTATACT  3395

Query 1399  ------------------------------------------------  1398
                                                            
Sbjct 3396  TTTGACCAAACTAATAGAATTATCCATTAAACAAACAAAACTGTGCCA  3443

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