Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_02816
- Subject:
- NR_135905.2
- Aligned Length:
- 3656
- Identities:
- 1174
- Gaps:
- 2482
Alignment
Query 1 ----------------------------------------------------ATGGGCTGGATCACAGAAGATC 22
||||||||||||||||||||||
Sbjct 1 GTCATTCGAGGTCCGGGTCCGGCTTGCGGGGTCAGCGAACTGGAGAGGCGCCATGGGCTGGATCACAGAAGATC 74
Query 23 TTATTAGACGGAATGCTGAACACAACGACTGTGTCATTTTTTCCCTGGAGGAACTCTCGTTGCATCAGCAAGAA 96
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 TTATTAGACGGAATGCTGAACACAACGACTGTGTCATTTTTTCCCTGGAGGAACTCTCGTTGCATCAGCAAGAA 148
Query 97 ATAGAAAGACTAGAACACATTGATAAATGGTGCCGGGATTTAAAAATTCTCTATCTTCAAAATAATCTTATTGG 170
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 ATAGAAAGACTAGAACACATTGATAAATGGTGCCGGGATTTAAAAATTCTCTATCTTCAAAATAATCTTATTGG 222
Query 171 GAAAATTGAAAATGTTAGCAAACTCAAGAAACTTGAATATTTGAATTTAGCTTTAAACAACATTGAAAAAATAG 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GAAAATTGAAAATGTTAGCAAACTCAAGAAACTTGAATATTTGAATTTAGCTTTAAACAACATTGAAAAAATAG 296
Query 245 AAAACTTGGA---------------------------------------------------------------- 254
||||||||||
Sbjct 297 AAAACTTGGAAGATGTCATCTATTGACTTCCTGATGTGGACGATGCAGATTTTGTTCTCTCACACCATCTGCAA 370
Query 255 -------------------------------------------------------------------------- 254
Sbjct 371 GGTTCTCAATTTTCTCCTACCCACCCTCCGTGTATTTTCATATGACATTGACAGGATATCATAATGAAATATGG 444
Query 255 -------------------------------------------------------------------------- 254
Sbjct 445 CATACGGACCCATTTACGGGGACTGGTCTTTTGAATTAACTGTGTTGGGAGAGGATATTACACTTGCTCCCCAA 518
Query 255 -------------------------------------------------------------------------- 254
Sbjct 519 CTCTCCCACATCTAATCTCTGGCCTTTCTTATCCTACCTGCCTCCTCCTGCCTTCTTCCAAGCTGGTCTCTCCA 592
Query 255 ---------------------------AGGATGTGAAGAGCTGGCAAAACTTGACCTGACTGTGAATTTCATTG 301
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TCTCCACCTGTGTCATGAATTCCAGGCAGGATGTGAAGAGCTGGCAAAACTTGACCTGACTGTGAATTTCATTG 666
Query 302 GAGAGCTGAGCAGCATTAAAAACTTGCAGCACAATATCCATCTGAAGGAGCTCTTTCTCATGGGGAACCCATGT 375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GAGAGCTGAGCAGCATTAAAAACTTGCAGCACAATATCCATCTGAAGGAGCTCTTTCTCATGGGGAACCCATGT 740
Query 376 GCTTCCTTTGACCACTATAGGGAGTTCGTGGTAGCAACTCTTCCACAATTAAAGTGGTTGGATGGTAAAGAAAT 449
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GCTTCCTTTGACCACTATAGGGAGTTCGTGGTAGCAACTCTTCCACAATTAAAG-------------------- 794
Query 450 AGAGCCTTCAGAAAGGATTAAGGCATTGCAGGACTATTCAGTAATTGAACCACAAATCAGAGAGCAGGAAAAAG 523
Sbjct 795 -------------------------------------------------------------------------- 794
Query 524 ATCACTGTCTTAAACGAGCCAAACTCAAGGAAGAGGCTCAGAGGAAACACCAAGAAGAGGATAAAAATGAAGAC 597
Sbjct 795 -------------------------------------------------------------------------- 794
Query 598 AAGAGAAGTAACGCAGGCTTTGATGGACGTTGGTACACAGACATCAATGCTACTCTTTCCTCTTTAGAGAGCAA 671
||||||||||||||||||
Sbjct 795 --------------------------------------------------------TTCCTCTTTAGAGAGCAA 812
Query 672 AGACCACCTACAGGCACCAGACACAGAGGAACACAACACAAAGAAATTAGACAACAGTGAAGATGACTTGGAAT 745
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 813 AGACCACCTACAGGCACCAGACACAGAGGAACACAACACAAAGAAATTAGACAACAGTGAAGATGACTTGGAAT 886
Query 746 TCTGGAATAAGCCCTGTTTGTTTACTCCTGAATCAAGATTGGAAACTCTTAGACACATGGAAAAACAACGGAAG 819
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 887 TCTGGAATAAGCCCTGTTTGTTTACTCCTGAATCAAGATTGGAAACTCTTAGACACATGGAAAAACAACGGAAG 960
Query 820 AAACAGGAAAAATTAAGTGAAAAAAAGAAGAAAGTGAAACCACCCAGGACTTTGATCACTGAAGATGGGAAAGC 893
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 961 AAACAGGAAAAATTAAGTGAAAAAAAGAAGAAAGTGAAACCACCCAGGACTTTGATCACTGAAGATGGGAAAGC 1034
Query 894 CCTAAATGTGAATGAGCCCAAAATTGACTTCTCTTTGAAAGATAACGAAAAGCAGATCATCCTGGACCTTGCTG 967
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1035 CCTAAATGTGAATGAGCCCAAAATTGACTTCTCTTTGAAAGATAACGAAAAGCAGATCATCCTGGACCTTGCTG 1108
Query 968 TCTATAGGTATATGGATACCTCTTTAATCGATGTTGATGTGCAACCAACTTACGTGCGAGTAATGATCAAAGGA 1041
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1109 TCTATAGGTATATGGATACCTCTTTAATCGATGTTGATGTGCAACCAACTTACGTGCGAGTAATGATCAAAGGA 1182
Query 1042 AAGCCATTTCAGCTTGTCCTTCCTGCAGAAGTGAAACCCGATAGTAGTTCTGCTAAAAGATCTCAGACAACGGG 1115
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1183 AAGCCATTTCAGCTTGTCCTTCCTGCAGAAGTGAAACCCGATAGTAGTTCTGCTAAAAGATCTCAGACAACGGG 1256
Query 1116 TCATTTGGTCATCTGCATGCCCAAGGTAGGAGAAGTAATCACAGGTGGTCAGCGAGCATTCAAATCTATGAAAA 1189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1257 TCATTTGGTCATCTGCATGCCCAAGGTAGGAGAAGTAATCACAGGTGGTCAGCGAGCATTCAAATCTATGAAAA 1330
Query 1190 CTACCTCGGACAGGAGCAGAGAACAAACAAATACAAGAAGCAAGCACATGGAGAAACTAGAAGTAGACCCTAGC 1263
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1331 CTACCTCGGACAGGAGCAGAGAACAAACAAATACAAGAAGCAAGCACATGGAGAAACTAGAAGTAGACCCTAGC 1404
Query 1264 AAGCACTCATTCCCTGATGTGACTAACATAGTTCAAGAGAAAAAACACACACCCAGAAGACGACCTGAACCCAA 1337
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1405 AAGCACTCATTCCCTGATGTGACTAACATAGTTCAAGAGAAAAAACACACACCCAGAAGACGACCTGAACCCAA 1478
Query 1338 AATTATACCAAGTGAGGAAGACCCAACCTTTGAAGACAACCCTGAAGTGCCTCCGCTGATT------------- 1398
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1479 AATTATACCAAGTGAGGAAGACCCAACCTTTGAAGACAACCCTGAAGTGCCTCCGCTGATTTGAAACATCTGGC 1552
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 1553 TGCGTTGCCATTGGCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGGG 1626
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 1627 ATAAACACAGAGTTATTTGTCAATATCGCTGCTCCAGTGTTTTAACTCTTACTTTGCATAGTAATATCCTTAAG 1700
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 1701 ATAGCTTAAAATTAAAATGTATGTCTTAAATGCTATAACTCATCATTTACCTATAATAAAGGGTTGGTATTGAA 1774
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 1775 AATGTTTAGTAAGATCATAGAACTATTGCATAAAACACTGATTATAAATACTGTCTACTTATGCAAAGTATTAA 1848
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 1849 TTCATAGATAAAAGGACTGAGTATTAAATTGGTACTTCAGCAAAGTGGTCAAGCTTAGAAGTTAAAACTGTAAT 1922
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 1923 TTCAGACCCAATTGGAATACTTTAATATGATTTTAAACAGCATTTCCATTTTCCTTCCCATGATGTGTCTGCTT 1996
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 1997 TCTCTGGTGGCATGGTATAATGGCAAGAATATGAGTTTTGAAACCAGACACTCTATATTTGGATTCCAGCTCAA 2070
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2071 TCACTTTGTAAAGACCTTCAGCAAGTCCTTTAATTCTCTGAGCCTTAGTGGCTTCATGTATAATCTGGGAATAA 2144
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2145 TAACACTTGCCTCACAGGTTTGTCTCAAGATAAACTGCAGAAAGCACTTAGTACAGTGTCAGCCATACATTTAG 2218
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2219 AGCCTCTTCTCTCTCTCCTTCTTCCCTTTCTCCTCTCTCTTCTCCTCCCTTTCTCCTGTCTCTCCTCCTCCCTG 2292
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2293 CTCCTTCTTCCCCTCCCTCCCCAATTACTTTTCTCCCCTTATTCTTTTTCTTCACCTTTTTACTCCCCATCCCA 2366
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2367 CTCCTTCTCCTCTATTTCCTTCTTTACTTTTTTAATATCCTACCTCTTCTTTATCTAGAACATTATGAATTCAA 2440
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2441 TATTTCACATACATTGTAGGACAAATTACTGTTACTCTGATCATGATATAGCAACATTTAAGTCAGTTTCCCCA 2514
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2515 AATATTCATTCAACAAATACTTATTGAGCAACTATTGAGTGCTAGCCCCCTCTCTGTTCATCAGGGATTTAGTA 2588
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2589 GTAACAAAGCAGACAAATACATACACACAGACTATGTCAGGTGGTGTTCAGAGCTGTGAAGGAGAGTCAGAGTG 2662
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2663 AGGGAATCAAGGGTGATGGGTGCTTTTTCAGACAGGGCCTTTCTCTATTAAACAGGCTTCCAGTGGAAGACTCT 2736
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2737 GCTAATGTTTAGCAGATAACCAAAATGCATCAGTTAGAAAAAAATATGATGAGAATGAGGGACTGGTTATAGGA 2810
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2811 ATGCAATTGGGCACAAATGTGGGAAGAGCTGGGTAGTGAAGCTCTAGAAGGGAGAGGTAGAGAATTGGAAGAAG 2884
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2885 AAGCACTGGTACAGGTAGACAATTCAGAACTTGCACAGAATCTGAGAAGCTGAAGTAGGACTGTGATTGGGAGC 2958
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2959 TTGTGGAGAGGTCTATGGAAATTATCATGCTGCTGAAATTGTTGCCTCTATTTATCTGCTACCCTTCTGGTCCG 3032
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 3033 TGGCCAAGATCCTGGTGGGTGGGCTTGGAGCCAGCCTTCGTCAGCAGGCCTGCGGTAAGAAAGATGGGATGGAC 3106
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 3107 ACACAGTGGTGGAGATCAAGGATCAGCTGCAGCAGGCTGGGTCCCTCTGCATCTGTCCATCACTGCGACTGATG 3180
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 3181 GCAATGACTGAGTATAACACCTTTCTTCATGGTCAACTCTACCCAGGAACCACGTAGGGAAGGAAATTCTGGAA 3254
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 3255 AACAGCTCCCAGCCTTAGCCAACTTGACATATCATAATCCAACAGAACTCAACCTCTACCAACTTGGAAATCAT 3328
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 3329 GTACATTTGTCAGGACTGTATTTAATTTCCACATAGAGAGAAAGCAAAATTATACTTTTGACCAAACTAATAGA 3402
Query 1399 ------------------------------ 1398
Sbjct 3403 ATTATCCATTAAACAAACAAAACTGTGCCA 3432
