Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_02825
- Subject:
- XM_006531684.3
- Aligned Length:
- 1938
- Identities:
- 742
- Gaps:
- 1062
Alignment
Query 1 ATGTCCGCATCCGCCCAGCAGCTGGCGGAGGAGCTGCAGATCTTCGGCCTAGACTGCGAGGAGGCTCTAATTGA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 GAAATTGGTAGAGCTTTGTGTTCAGTATGGACAGAATGAGGAGGGAATGGTAGGCGAGCTTATAGCCTTCTGCA 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 CCAGCACACATAAAGTTGGCCTTACCTCAGAGATCCTGAACTCTTTTGAGCATGAGTTTCTGAGCAAAAGATTA 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 TCGAAAGCCAGGCATAGTACCTGCAAGGACAGTGGCCATGCAGGAGCTAGAGACATTGTTTCCATTCAAGAGCT 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 AATTGAAGTGGAAGAAGAAGAGGAAATCCTCTTGAACTCTTACACCACACCTTCAAAGGGTTCTCAGAAGCGAG 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 CTATCTCTACCCCAGAAACCCCCCTAACAAAAAGGAGTGTGTCAACTCGTAGCCCCCATCAGCTACTCTCACCG 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 TCAAGTTTCTCTCCAAGTGCTACTCCCTCCCAGAAATACAACTCACGAAGTAACCGAGGAGAAGTGGTTACCTC 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 CTTCGGCTTAGCACAGGGAGTATCTTGGTCTGGGAGAGGAGGAGCTGGAAACATCAGCCTGAAGGTCTTGGGAT 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 GTCCAGAGGCACTAACTGGGAGCTACAAATCCATGTTTCAGAAGCTCCCAGACATTCGAGAAGTTCTGACCTGT 666
Sbjct 1 -------------------------------------------------------------------------- 0
Query 667 AAGATAGAAGAACTTGGCAGCGAACTCAAGGAACATTACAAGATTGAAGCTTTCACTCCTTTGCTAGCCCCAGC 740
Sbjct 1 -------------------------------------------------------------------------- 0
Query 741 ACAGGAGCCTGTCACTCTGCTGGGCCAGATTGGCTGTGATAGCAACGGGAAGCTGAACAACAAGTCAGTGATTC 814
Sbjct 1 -------------------------------------------------------------------------- 0
Query 815 TCGAGGGAGACCGGGAACATTCCTCGGGTGCTCAAATTCCAGTGGATTTATCTGAGCTTAAGGAATATTCTCTG 888
Sbjct 1 -------------------------------------------------------------------------- 0
Query 889 TTTCCTGGACAGGTTGTAATTATGGAAGGAATCAACACCACTGGTAGGAAACTTGTTGCCACCAAACTCTACGA 962
|||||||||.||||||||||||||||||.||||..|||||||||||||||.||
Sbjct 1 ---------------------ATGGAAGGATTCAACACCACTGGTAGGAGACTTACTGCCACCAAACTCTATGA 53
Query 963 GGGTGTGCCACTTCCATTTTATCAGCCCACTGAAGAGGATGCAGACTT-TGAGCAAAGCATGGTCCTGGTTGCC 1035
|||.|||||||||||.||.||||||||.|||||||||||.|.|| ||| ||||||.|..|||||..|.||||||
Sbjct 54 GGGCGTGCCACTTCCGTTCTATCAGCCTACTGAAGAGGAGGGAG-CTTCTGAGCAGACTATGGTGGTAGTTGCC 126
Query 1036 TGTGGACCATACACCACATCTGACAGCATCACGTATGACCCCCTGCTTGACCTGATTGCTGTCATCAACCATGA 1109
||.||.||.||.|||||.||.|||||||||||.|||||||||||||||||.|||||.||..|||||||||.|||
Sbjct 127 TGCGGGCCTTATACCACCTCCGACAGCATCACCTATGACCCCCTGCTTGATCTGATCGCCATCATCAACCGTGA 200
Query 1110 CCGGCCAGATGTCTGCATCCTGTTTGGCCCTTTCCTGGATGCTAAGCATGAACAGGTGGAGAATTGTCTACTGA 1183
||.|||||||||||||||||||||.||.|||||||||||||||||.|||||||||||||||||.|||....|||
Sbjct 201 CCAGCCAGATGTCTGCATCCTGTTCGGACCTTTCCTGGATGCTAAACATGAACAGGTGGAGAACTGTAAGTTGA 274
Query 1184 CAAGTCCATTTGAAGACATTTTCAAGCAGTGTCTACGAACAATTATTGAAGGCACAAGA--------------- 1242
||||.|||||.||||||.||||||||||.||.||..|||||.||||.|||||.||.|||
Sbjct 275 CAAGCCCATTCGAAGACGTTTTCAAGCAATGCCTGAGAACAGTTATCGAAGGAACGAGAAGACAACAGTTCTCC 348
Query 1243 -------------------------------------------------------------------------- 1242
Sbjct 349 TCTGTAAAGGGTGCCACAAAAATCAAGAGACGATGTGTCCTAAGCTATGTGCACCAGATCCAGATCAGCATGTT 422
Query 1243 ----------------------------------------AGCTCCGGCTCCCACCTTGTCTTTGTCCCGTCAT 1276
||||||||||||||||||||||||||||||||..
Sbjct 423 TATGTGCCAGGAGGTTGCCTTTCCCTCACGGGGTCCTGCGAGCTCCGGCTCCCACCTTGTCTTTGTCCCGTCTC 496
Query 1277 TGAGAGATGTGCACCATGAGCCTGTGTACCCCCAGCCGCCTTTCAGCTACTCCGATCTGTCTCGAGAGGACAAA 1350
||||.|||||.||.||||||||.||.|||||.|||||||||||||.||.||||||.||||||||||||||||||
Sbjct 497 TGAGGGATGTCCATCATGAGCCAGTATACCCACAGCCGCCTTTCACCTTCTCCGAGCTGTCTCGAGAGGACAAA 570
Query 1351 AAGCAAGTACAGTTTGTGTCCGAGCCCTGCAGCCTCTCCATAAACGGAGTGATCTTCGGCTTGACATCCACAGA 1424
||||.|||.|||||||||||.|||||||||||||||||||||||.||||||||.||.||.|||||||||||.||
Sbjct 571 AAGCGAGTGCAGTTTGTGTCAGAGCCCTGCAGCCTCTCCATAAATGGAGTGATGTTTGGTTTGACATCCACGGA 644
Query 1425 TCTGCTTTTCCACCTGGGGGCCGAGGAGATCAGTAGTTCTTCCGGAACTTCAGACAGATTCAGCCGAATACTCA 1498
.|||||.||||||.|.|||||.|||||||||..|||.||||||||.||.||||||||||||||||||.|.||.|
Sbjct 645 CCTGCTGTTCCACATCGGGGCTGAGGAGATCTTTAGCTCTTCCGGGACGTCAGACAGATTCAGCCGAGTCCTTA 718
Query 1499 AGCACATCTTGACCCAGAGGAGCTACTACCCACTCTACCCGCCCCAAGAAGACATGGCCATTGACTATGAGTCG 1572
||||.|||.||||.|||||.||.|||||||||||.||.||.|||||.||.|||||||||||.|||||.|||...
Sbjct 719 AGCATATCCTGACGCAGAGAAGTTACTACCCACTTTATCCACCCCACGAGGACATGGCCATAGACTACGAGAAC 792
Query 1573 TTCTATGTTTACGCACAGCTGCCTGTCACCCCAGATGTCCTCATCATCCCGTCAGAGCTGAGGTACTTCGTGAA 1646
||||||...||.||.||||||||.||||||||.||||||.||||..|.|||||.||||||||.|||||.|||||
Sbjct 793 TTCTATACCTATGCCCAGCTGCCGGTCACCCCCGATGTCTTCATAGTGCCGTCCGAGCTGAGATACTTTGTGAA 866
Query 1647 GGATGTCCTCGGCTGTGTCTGTGTGAACCCTGGGCGCCTTACCAAAGGGCAGGTGGGAGGCACCTTCGCCCGAC 1720
|||..||.|.|||||||||||||||||.||||||||.||.||||||||.||.|||||.||||||||.|.|||.|
Sbjct 867 GGACATCTTTGGCTGTGTCTGTGTGAATCCTGGGCGGCTCACCAAAGGACAAGTGGGCGGCACCTTTGGCCGCC 940
Query 1721 TCTACCTTAGGAGGCCGGCAGC----------GGAC----GGGGCAGAGAGGCAGAGCCCATGCATTGCTGTGC 1780
|||||||.|||| |||||| |||| ||||| ||||||.|||...||.|.||.|.||
Sbjct 941 TCTACCTCAGGA----GGCAGCCCAAGGCCATGGACGGTGGGGGC----AGGCAGGGCCTGAGCGTGGCAGCGC 1006
Query 1781 AGGTCGTCAGGATC 1794
||||.|||||.|||
Sbjct 1007 AGGTGGTCAGAATC 1020
