Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_02902
Subject:
XM_017319144.1
Aligned Length:
1690
Identities:
989
Gaps:
596

Alignment

Query    1  ATGGGCGCCGCCGCCTCCAGGAGGAGGGCGCTGAGGAGCGAGGCCATGTCCTCGGTGGCGGCCAAAGTGCGAGC  74
            |||||.||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||..||||
Sbjct    1  ATGGGTGCCGCCGCCTCCAGGAGGAGGGCGCTGAGGAGCGAGGCCATGTCCTCGGTAGCGGCCAAAGTAAGAGC  74

Query   75  AGCCCGAGCGTTTGGAGAGTACCTGTCCCAGAGTCACCCTGAGAACCGCAACGGCGCAGATCACCTGCTGGCTG  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||            ||
Sbjct   75  AGCCCGAGCGTTTGGAGAGTACCTGTCCCAGAGTCACCCTGAGAACCGCAACGGTGCAGA------------TG  136

Query  149  ATGCCTACTCTGGCCACGACGGGTCCCCCGAGATGCAGCCGGCCCCCCAGAACAAGCGCCGCCTGTCCCTCGTC  222
            ||                    ||||||    ||                            |.||.|||.|| 
Sbjct  137  AT--------------------GTCCCC----AT----------------------------CCGTACCTGGT-  157

Query  223  TCCAACGGCTGCTACGAGGGCAGCCTCTCAGAGGAGCCCAGCATTAGGAAGCCCGCAGGCGAGGGCCCTCAGCC  296
            ||                                  ||||     ||||                         
Sbjct  158  TC----------------------------------CCCA-----AGGA-------------------------  167

Query  297  TCGAGTGTACACCATCTCTGGGGAGCCTGCCCTGCTGCCCAGCCCTGAGGCGGAGGCCATTGAGCTGGCGGTGG  370
                    |.|||.|.||     |||.|          |||                                 
Sbjct  168  --------AAACCTTTTC-----AGCTT----------CCA---------------------------------  185

Query  371  TGAAGGGGCGGCGGCAGCGGCACCCTCACCATCACAGCCAGCCCCTGCGCGCCAGCCCTGGTGGCAGCCGGGAG  444
                     |.|||||              |.||||.|.|     |||..||||.|.|               |
Sbjct  186  ---------GACGGCA--------------ACCACAACTA-----TGCAAGCCATCTC---------------G  216

Query  445  GACGTCAGCAGGCCCTGCCAGAGCTGGGCGGGCAGCCGCCAGGGCTCCAAGGAGTGCCCCGGATGTGCCCAGCT  518
            |...||||                                 |||||.|..||||     .|||       ||| 
Sbjct  217  GTATTCAG---------------------------------GGGCTACGCGGAG-----AGGA-------AGC-  244

Query  519  GGCTCCTGGCCCCACCCCTCGGGCCTTTGGGCTGGACCAGCCACCTCTGCCTGAGACCTCCGGTCGCCGCAAGA  592
                                                                          ||||      ||
Sbjct  245  --------------------------------------------------------------GTCG------GA  250

Query  593  AGCTGGAGAGGATG-TACAGCGTTGACCGTGTGTCTGACGACATCCCTATTCGTACCTGGTTCCCCAAGGAAAA  665
            |.|.|||||  ||| |.|.||           |||||          ||                         
Sbjct  251  AACGGGAGA--ATGATTCCGC-----------GTCTG----------TA-------------------------  276

Query  666  TCTTTTCAGCTTCCAGACAGCAACCACAACTATGCAAGCGAACTTCCGCAAACACCTGCGCATGGTCGGCAGCC  739
                      .||||||                     .|||||||||||||||||||||||||||.|||||.|
Sbjct  277  ----------ATCCAGA---------------------GGAACTTCCGCAAACACCTGCGCATGGTTGGCAGTC  319

Query  740  GGAGGGTGAAGGCCCAGACGTTCGCTGAGCGGCGCGAGCGGAGCTTCAGCCGGTCCTGGAGCGACCCCACCCCC  813
            ||.||||||||||||||||||||||||||||.|||||.|||||||||||||||||||||||||||||||||||.
Sbjct  320  GGCGGGTGAAGGCCCAGACGTTCGCTGAGCGTCGCGAACGGAGCTTCAGCCGGTCCTGGAGCGACCCCACCCCT  393

Query  814  ATGAAAGCCGACACTTCCCACGACTCCCGAGACAGCAGTGACCTGCAGAGCTCCCACTGCACGCTGGACGAGGC  887
            ||||||||||||||||||||||||||||||||||||||||||||.||||||||.||||||||.|||||.|||||
Sbjct  394  ATGAAAGCCGACACTTCCCACGACTCCCGAGACAGCAGTGACCTACAGAGCTCACACTGCACCCTGGATGAGGC  467

Query  888  CTTCGAGGACCTGGACTGGGACACTGAGAAGGGCCTGGAGGCTGTGGCCTGCGACACCGAAGGCTTCGTGCCAC  961
            .|..||||||||||||||||||||.|||||.||.||||||||..||||||||.|||||||.||||||.||||||
Sbjct  468  TTGTGAGGACCTGGACTGGGACACAGAGAAAGGTCTGGAGGCCATGGCCTGCAACACCGAGGGCTTCTTGCCAC  541

Query  962  CAAAGGTCATGCTCATTTCCTCCAAGGTGCCCAAGGCTGAGTACATCCCCACTATCATCCGCCGGGATGACCCC  1035
            |.||||||||||||||.||||||||||||||.|||||.|||||.|||||.||||||||||||.|.||||||||.
Sbjct  542  CCAAGGTCATGCTCATCTCCTCCAAGGTGCCAAAGGCCGAGTATATCCCTACTATCATCCGCAGAGATGACCCG  615

Query 1036  TCCATCATCCCCATCCTCTACGACCATGAGCACGCAACCTTCGAGGACATCCTTGAGGAGATAGAGAGGAAGCT  1109
            ||||||||.|||||||||||||||||.|||||.||||||||||||||||||||.|||||.|||||||.|||..|
Sbjct  616  TCCATCATTCCCATCCTCTACGACCACGAGCATGCAACCTTCGAGGACATCCTGGAGGAAATAGAGAAGAAATT  689

Query 1110  GAACGTCTACCACAAGGGAGCCAAGATCTGGAAAATGCTGATTTTCTGC-------------------------  1158
            ||||.||||.||||||||.||||||||||||||.|||||||||||||||                         
Sbjct  690  GAACATCTATCACAAGGGGGCCAAGATCTGGAAGATGCTGATTTTCTGCCAGGTAGAAGCAGCCTTTCCTTTCC  763

Query 1159  --------------------------------------------------------------------------  1158
                                                                                      
Sbjct  764  TCCCCAGGAAAAGAGGGCAGTGTGGTATGGGTAGGGCCCCAAGATCTTACTCAGTGTGGGCGTGTCCATGTGGT  837

Query 1159  --------------------------------------------------------------------------  1158
                                                                                      
Sbjct  838  ACATTTGTGGACGACATGCACACGCCTCATCCTAGCCTCCCCCTAGCACTCCTGAGGCCTGACCGTGACCTCTT  911

Query 1159  -CAGGGAGGTCCTGGACACCTCTATCTCCTCAAGAACAAGGTGGCCACCTTTGCCAAAGTGGAGAAGGAAGAGG  1231
             |||||.||.|||||||||||.|||.|.||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  912  TCAGGGCGGCCCTGGACACCTTTATTTGCTCAAGAACAAGGTGGCCACCTTTGCCAAAGTGGAGAAGGAAGAGG  985

Query 1232  ACATGATTCACTTCTGGAAGCGGCTGAGCCGCCTGATGAGCAAAGTGAACCCAGAGCCGAACGTCATCCACATC  1305
            |||||||.||||||||||||.||||||||||||||||||||||.||||||||.||||||||.||||||||||||
Sbjct  986  ACATGATCCACTTCTGGAAGAGGCTGAGCCGCCTGATGAGCAAGGTGAACCCCGAGCCGAATGTCATCCACATC  1059

Query 1306  ATGGGCTGCTACATTCTGGGGAACCCCAATGGAGAGAAGCTGTTCCAGAACCTCAGGACCCTCATGACTCCTTA  1379
            ||||||||||||||||||||||||||.||.||.||||||||.||||||||||||||||||||||||||.|||||
Sbjct 1060  ATGGGCTGCTACATTCTGGGGAACCCTAACGGGGAGAAGCTATTCCAGAACCTCAGGACCCTCATGACCCCTTA  1133

Query 1380  TAGGGTCACCTTCGAGTCACCCCTGGAGCTCTCAGCCCAAGGGAAGCAGATGATCGAGACGTACTTTGACTTCC  1453
            .|.|||.|||||.|||||.||.||.|||||.||.||||||||||||||||||||.|||||.|||||||||||||
Sbjct 1134  CAAGGTTACCTTTGAGTCGCCTCTCGAGCTGTCTGCCCAAGGGAAGCAGATGATTGAGACCTACTTTGACTTCC  1207

Query 1454  GGTTGTATCGCCTGTGGAAGAGCCGCCAGCACTCGAAGCTGCTGGACTTTGACGACGTCCTG  1515
            ||.||||.||||||||||||||||||||||||||.|||||||||||||||||.|||||||||
Sbjct 1208  GGCTGTACCGCCTGTGGAAGAGCCGCCAGCACTCAAAGCTGCTGGACTTTGATGACGTCCTG  1269

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