Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_02903
- Subject:
- XM_017014597.2
- Aligned Length:
- 1621
- Identities:
- 964
- Gaps:
- 596
Alignment
Query 1 ATGGGCGCCGCCGCCTCCAGGAGGAGGGCGCTGAGGAGCGAGGCCATGTCCTCGGTGGCGGCCAAAGTGCGAGC 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 AGCCCGAGCGTTTGGAGAGTACCTGTCCCAGAGTCACCCTGAGAACCGCAACGGCGCAGATCACCTGCTGGCTG 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 ATGCCTACTCTGGCCACGACGGGTCCCCCGAGATGCAGCCGGCCCCCCAGAACAAGCGCCGCCTGTCCCTC-GT 221
||| ||| ||||.|.||||| || ||| |..||..||||| ||
Sbjct 1 ATG-------TGG-------------CCCGGGCTGCAG-----------GA--AAG---CATCTCACCCTCAGT 38
Query 222 CTCCAACGGCTG--CTACGAGGGCA---GCCTC--TCAGAG--GAGCCCAGCATTAGGAA-GCCCGCAGGCGAG 285
| ||| ||.|||||||| |.||| ||.|.| |.|.||||| ||.|| ||||
Sbjct 39 C--------CTGCACTCCGAGGGCACGTGTCTCTGTCTGGGCTGGGGCCAGC---AGCAAGGCCC--------- 92
Query 286 GGCCCTCAGC--CTCGAGTGTACAC-CA----TCTCTGGGGAGC----CTGCCC--------TGCTGCCCAGCC 340
|||||..| |||.|.| ||| || |.||||||.||| .||||| ||.|| |.|
Sbjct 93 --CCCTCCCCCACTCCAAT---CACACAGATGTGTCTGGGAAGCTTTTTTGCCCGTTTTGGATGTTG----GGC 157
Query 341 CTGAGGCGGAGGCCA---TTGAGCTGGCGGTGGTGAAGGGGCGGCGGCAGCGGCACCCTCACCATCACAGCCAG 411
|| .|||.|.|.||| || |||||.|||.|.|| .||.|
Sbjct 158 CT-TGGCAGGGTCCAAAGTT----------TGGTGGAGGAGAGG-------------------------ACCTG 195
Query 412 CCCCTGCGCGCCAGCCCTGGTGGCAGCCGGGAGGACGTCAGCAGGCCCTGCCAGAGCTGGGCGGGCAGCCGCCA 485
|||||| .|||||| ||| |||.| .||||||
Sbjct 196 CCCCTG-----------AGGTGGC-------------TCA--AGGAC---ACAGAGC----------------- 223
Query 486 GGGCTCCAAGGAGTGCCCCGGATGTGCCCAGCTGGCTCCT----GGCCCCACCCCTCGGGCCTTTGGGCTGGAC 555
||||| ||..||||||| |.|||||.||| ||| .||||.|||..
Sbjct 224 --------AGGAG----------------AGGGGGCTCCTGCAGGCCCCCAGCCC----GCC-ATGGGGTGGTG 268
Query 556 CAGCCACCTCTGCCTGAGACCTCCGGTCGCCGCAAGAAGCTGGAGAGGATGTACAGCGTTGACCGTGTGTCTGA 629
|||.|| .||.|.|||.|| .||||.||.|.|.| |||
Sbjct 269 CAGACA----------GGAGCCCCGCTC---------TGCTGCAGCGCAGG--CAG------------------ 303
Query 630 CGACATCCCTATTCGTACCTGGTTCCCCAAGGAAAATCTTTTCAGCTTCCAGACAGCAACCACAACTATGCAAG 703
.||||.||| .||.|||
Sbjct 304 -----------------GCTGGATCC------------------TCTGCCA----------------------- 319
Query 704 CGGTGTTCAGGGGCTACGCGGAGAGGAAGCGCCGGAAACGGGAGAATGATTCCGCGTCTGTAATCCAGAGGAAC 777
||.|||| |.|||.||.|.|| || ||||
Sbjct 320 -------CATGGGC--------GTGGAGGCTCAGG------------------GC---------------GAAC 345
Query 778 TTCCGCAAACACCTGCGCATGGTCGGCAGCCGGAGGGTGAAGGCCCAGACGTTCGCTGAGCGGCGCGAGCGGAG 851
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 346 TTCCGCAAACACCTGCGCATGGTCGGCAGCCGGAGGGTGAAGGCCCAG-------------------------- 393
Query 852 CTTCAGCCGGTCCTGGAGCGACCCCACCCCCATGAAAGCCGACACTTCCCACGACTCCCGAGACAGCAGTGACC 925
||||||||||
Sbjct 394 ----------------------------------------------------------------AGCAGTGACC 403
Query 926 TGCAGAGCTCCCACTGCACGCTGGACGAGGCCTTCGAGGACCTGGACTGGGACACTGAGAAGGGCCTGGAGGCT 999
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 404 TGCAGAGCTCCCACTGCACGCTGGACGAGGCCTTCGAGGACCTGGACTGGGACACTGAGAAGGGCCTGGAGGCT 477
Query 1000 GTGGCCTGCGACACCGAAGGCTTCGTGCCACCAAAGGTCATGCTCATTTCCTCCAAGGTGCCCAAGGCTGAGTA 1073
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 478 GTGGCCTGCGACACCGAAGGCTTCGTGCCACCAAAGGTCATGCTCATTTCCTCCAAGGTGCCCAAGGCTGAGTA 551
Query 1074 CATCCCCACTATCATCCGCCGGGATGACCCCTCCATCATCCCCATCCTCTACGACCATGAGCACGCAACCTTCG 1147
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 552 CATCCCCACTATCATCCGCCGGGATGACCCCTCCATCATCCCCATCCTCTACGACCATGAGCACGCAACCTTCG 625
Query 1148 AGGACATCCTTGAGGAGATAGAGAGGAAGCTGAACGTCTACCACAAGGGAGCCAAGATCTGGAAAATGCTGATT 1221
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 626 AGGACATCCTTGAGGAGATAGAGAGGAAGCTGAACGTCTACCACAAGGGAGCCAAGATCTGGAAAATGCTGATT 699
Query 1222 TTCTGCCAGGGAGGTCCTGGACACCTCTATCTCCTCAAGAACAAGGTGGCCACCTTTGCCAAAGTGGAGAAGGA 1295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 700 TTCTGCCAGGGAGGTCCTGGACACCTCTATCTCCTCAAGAACAAGGTGGCCACCTTTGCCAAAGTGGAGAAGGA 773
Query 1296 AGAGGACATGATTCACTTCTGGAAGCGGCTGAGCCGCCTGATGAGCAAAGTGAACCCAGAGCCGAACGTCATCC 1369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 774 AGAGGACATGATTCACTTCTGGAAGCGGCTGAGCCGCCTGATGAGCAAAGTGAACCCAGAGCCGAACGTCATCC 847
Query 1370 ACATCATGGGCTGCTACATTCTGGGGAACCCCAATGGAGAGAAGCTGTTCCAGAACCTCAGGACCCTCATGACT 1443
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 848 ACATCATGGGCTGCTACATTCTGGGGAACCCCAATGGAGAGAAGCTGTTCCAGAACCTCAGGACCCTCATGACT 921
Query 1444 CCTTATAGGGTCACCTTCGAGTCACCCCTGGAGCTCTCAGCCCAAGGGAAGCAGATGATCGAGACGTACTTTGA 1517
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 922 CCTTATAGGGTCACCTTCGAGTCACCCCTGGAGCTCTCAGCCCAAGGGAAGCAGATGATCGAGACGTACTTTGA 995
Query 1518 CTTCCGGTTGTATCGCCTGTGGAAGAGCCGCCAGCACTCGAAGCTGCTGGACTTTGACGACGTCCTG 1584
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 996 CTTCCGGTTGTATCGCCTGTGGAAGAGCCGCCAGCACTCGAAGCTGCTGGACTTTGACGACGTCCTG 1062
