Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_02903
Subject:
XM_017319144.1
Aligned Length:
1764
Identities:
1006
Gaps:
675

Alignment

Query    1  ATGGGCGCCGCCGCCTCCAGGAGGAGGGCGCTGAGGAGCGAGGCCATGTCCTCGGTGGCGGCCAAAGTGCGAGC  74
            |||||.||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||..||||
Sbjct    1  ATGGGTGCCGCCGCCTCCAGGAGGAGGGCGCTGAGGAGCGAGGCCATGTCCTCGGTAGCGGCCAAAGTAAGAGC  74

Query   75  AGCCCGAGCGTTTGGAGAGTACCTGTCCCAGAGTCACCCTGAGAACCGCAACGGCGCAGATCACCTGCTGGCTG  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||            ||
Sbjct   75  AGCCCGAGCGTTTGGAGAGTACCTGTCCCAGAGTCACCCTGAGAACCGCAACGGTGCAGA------------TG  136

Query  149  ATGCCTACTCTGGCCACGACGGGTCCCCCGAGATGCAGCCGGCCCCCCAGAACAAGCGCCGCCTGTCCCTCGTC  222
            |||                                                                       
Sbjct  137  ATG-----------------------------------------------------------------------  139

Query  223  TCCAACGGCTGCTACGAGGGCAGCCTCTCAGAGGAGCCCAGCATTAGGAAGCCCGCAGGCGAGGGCCCTCAGCC  296
                                                                                      
Sbjct  140  --------------------------------------------------------------------------  139

Query  297  TCGAGTGTACACCATCTCTGGGGAGCCTGCCCTGCTGCCCAGCCCTGAGGCGGAGGCCATTGAGCTGGCGGTGG  370
                                                                                      
Sbjct  140  --------------------------------------------------------------------------  139

Query  371  TGAAGGGGCGGCGGCAGCGGCACCCTCACCATCACAGCCAGCCCCTGCGCGCCAGCCCTGGTGGCAGCCGGGAG  444
                                                                                      
Sbjct  140  --------------------------------------------------------------------------  139

Query  445  GACGTCAGCAGGCCCTGCCAGAGCTGGGCGGGCAGCCGCCAGGGCTCCAAGGAGTGCCCCGGATGTGCCCAGCT  518
                                                                                      
Sbjct  140  --------------------------------------------------------------------------  139

Query  519  GGCTCCTGGCCCCACCCCTCGGGCCTTTGGGCTGGACCAGCCACCTCTGCCTGAGACCTCCGGTCGCCGCAAGA  592
                                                                                      
Sbjct  140  --------------------------------------------------------------------------  139

Query  593  AGCTGGAGAGGATGTACAGCGTTGACCGTGTGTCTGACGACATCCCTATTCGTACCTGGTTCCCCAAGGAAAAT  666
                                                      ||||.||.|||||||||||||||||||||||.
Sbjct  140  ------------------------------------------TCCCCATCCGTACCTGGTTCCCCAAGGAAAAC  171

Query  667  CTTTTCAGCTTCCAGACAGCAACCACAACTATGCAAG------CGGTGTTCAGGGGCTACGCGGAGAGGAAGCG  734
            |||||||||||||||||.|||||||||||||||||||      ||||.||||||||||||||||||||||||||
Sbjct  172  CTTTTCAGCTTCCAGACGGCAACCACAACTATGCAAGCCATCTCGGTATTCAGGGGCTACGCGGAGAGGAAGCG  245

Query  735  CCGGAAACGGGAGAATGATTCCGCGTCTGTAATCCAGAGGAACTTCCGCAAACACCTGCGCATGGTCGGCAGCC  808
            .|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||.|
Sbjct  246  TCGGAAACGGGAGAATGATTCCGCGTCTGTAATCCAGAGGAACTTCCGCAAACACCTGCGCATGGTTGGCAGTC  319

Query  809  GGAGGGTGAAGGCCCAGACGTTCGCTGAGCGGCGCGAGCGGAGCTTCAGCCGGTCCTGGAGCGACCCCACCCCC  882
            ||.||||||||||||||||||||||||||||.|||||.|||||||||||||||||||||||||||||||||||.
Sbjct  320  GGCGGGTGAAGGCCCAGACGTTCGCTGAGCGTCGCGAACGGAGCTTCAGCCGGTCCTGGAGCGACCCCACCCCT  393

Query  883  ATGAAAGCCGACACTTCCCACGACTCCCGAGACAGCAGTGACCTGCAGAGCTCCCACTGCACGCTGGACGAGGC  956
            ||||||||||||||||||||||||||||||||||||||||||||.||||||||.||||||||.|||||.|||||
Sbjct  394  ATGAAAGCCGACACTTCCCACGACTCCCGAGACAGCAGTGACCTACAGAGCTCACACTGCACCCTGGATGAGGC  467

Query  957  CTTCGAGGACCTGGACTGGGACACTGAGAAGGGCCTGGAGGCTGTGGCCTGCGACACCGAAGGCTTCGTGCCAC  1030
            .|..||||||||||||||||||||.|||||.||.||||||||..||||||||.|||||||.||||||.||||||
Sbjct  468  TTGTGAGGACCTGGACTGGGACACAGAGAAAGGTCTGGAGGCCATGGCCTGCAACACCGAGGGCTTCTTGCCAC  541

Query 1031  CAAAGGTCATGCTCATTTCCTCCAAGGTGCCCAAGGCTGAGTACATCCCCACTATCATCCGCCGGGATGACCCC  1104
            |.||||||||||||||.||||||||||||||.|||||.|||||.|||||.||||||||||||.|.||||||||.
Sbjct  542  CCAAGGTCATGCTCATCTCCTCCAAGGTGCCAAAGGCCGAGTATATCCCTACTATCATCCGCAGAGATGACCCG  615

Query 1105  TCCATCATCCCCATCCTCTACGACCATGAGCACGCAACCTTCGAGGACATCCTTGAGGAGATAGAGAGGAAGCT  1178
            ||||||||.|||||||||||||||||.|||||.||||||||||||||||||||.|||||.|||||||.|||..|
Sbjct  616  TCCATCATTCCCATCCTCTACGACCACGAGCATGCAACCTTCGAGGACATCCTGGAGGAAATAGAGAAGAAATT  689

Query 1179  GAACGTCTACCACAAGGGAGCCAAGATCTGGAAAATGCTGATTTTCTGC-------------------------  1227
            ||||.||||.||||||||.||||||||||||||.|||||||||||||||                         
Sbjct  690  GAACATCTATCACAAGGGGGCCAAGATCTGGAAGATGCTGATTTTCTGCCAGGTAGAAGCAGCCTTTCCTTTCC  763

Query 1228  --------------------------------------------------------------------------  1227
                                                                                      
Sbjct  764  TCCCCAGGAAAAGAGGGCAGTGTGGTATGGGTAGGGCCCCAAGATCTTACTCAGTGTGGGCGTGTCCATGTGGT  837

Query 1228  --------------------------------------------------------------------------  1227
                                                                                      
Sbjct  838  ACATTTGTGGACGACATGCACACGCCTCATCCTAGCCTCCCCCTAGCACTCCTGAGGCCTGACCGTGACCTCTT  911

Query 1228  -CAGGGAGGTCCTGGACACCTCTATCTCCTCAAGAACAAGGTGGCCACCTTTGCCAAAGTGGAGAAGGAAGAGG  1300
             |||||.||.|||||||||||.|||.|.||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  912  TCAGGGCGGCCCTGGACACCTTTATTTGCTCAAGAACAAGGTGGCCACCTTTGCCAAAGTGGAGAAGGAAGAGG  985

Query 1301  ACATGATTCACTTCTGGAAGCGGCTGAGCCGCCTGATGAGCAAAGTGAACCCAGAGCCGAACGTCATCCACATC  1374
            |||||||.||||||||||||.||||||||||||||||||||||.||||||||.||||||||.||||||||||||
Sbjct  986  ACATGATCCACTTCTGGAAGAGGCTGAGCCGCCTGATGAGCAAGGTGAACCCCGAGCCGAATGTCATCCACATC  1059

Query 1375  ATGGGCTGCTACATTCTGGGGAACCCCAATGGAGAGAAGCTGTTCCAGAACCTCAGGACCCTCATGACTCCTTA  1448
            ||||||||||||||||||||||||||.||.||.||||||||.||||||||||||||||||||||||||.|||||
Sbjct 1060  ATGGGCTGCTACATTCTGGGGAACCCTAACGGGGAGAAGCTATTCCAGAACCTCAGGACCCTCATGACCCCTTA  1133

Query 1449  TAGGGTCACCTTCGAGTCACCCCTGGAGCTCTCAGCCCAAGGGAAGCAGATGATCGAGACGTACTTTGACTTCC  1522
            .|.|||.|||||.|||||.||.||.|||||.||.||||||||||||||||||||.|||||.|||||||||||||
Sbjct 1134  CAAGGTTACCTTTGAGTCGCCTCTCGAGCTGTCTGCCCAAGGGAAGCAGATGATTGAGACCTACTTTGACTTCC  1207

Query 1523  GGTTGTATCGCCTGTGGAAGAGCCGCCAGCACTCGAAGCTGCTGGACTTTGACGACGTCCTG  1584
            ||.||||.||||||||||||||||||||||||||.|||||||||||||||||.|||||||||
Sbjct 1208  GGCTGTACCGCCTGTGGAAGAGCCGCCAGCACTCAAAGCTGCTGGACTTTGATGACGTCCTG  1269