Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_02903
- Subject:
- XM_017319144.1
- Aligned Length:
- 1764
- Identities:
- 1006
- Gaps:
- 675
Alignment
Query 1 ATGGGCGCCGCCGCCTCCAGGAGGAGGGCGCTGAGGAGCGAGGCCATGTCCTCGGTGGCGGCCAAAGTGCGAGC 74
|||||.||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||..||||
Sbjct 1 ATGGGTGCCGCCGCCTCCAGGAGGAGGGCGCTGAGGAGCGAGGCCATGTCCTCGGTAGCGGCCAAAGTAAGAGC 74
Query 75 AGCCCGAGCGTTTGGAGAGTACCTGTCCCAGAGTCACCCTGAGAACCGCAACGGCGCAGATCACCTGCTGGCTG 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||| ||
Sbjct 75 AGCCCGAGCGTTTGGAGAGTACCTGTCCCAGAGTCACCCTGAGAACCGCAACGGTGCAGA------------TG 136
Query 149 ATGCCTACTCTGGCCACGACGGGTCCCCCGAGATGCAGCCGGCCCCCCAGAACAAGCGCCGCCTGTCCCTCGTC 222
|||
Sbjct 137 ATG----------------------------------------------------------------------- 139
Query 223 TCCAACGGCTGCTACGAGGGCAGCCTCTCAGAGGAGCCCAGCATTAGGAAGCCCGCAGGCGAGGGCCCTCAGCC 296
Sbjct 140 -------------------------------------------------------------------------- 139
Query 297 TCGAGTGTACACCATCTCTGGGGAGCCTGCCCTGCTGCCCAGCCCTGAGGCGGAGGCCATTGAGCTGGCGGTGG 370
Sbjct 140 -------------------------------------------------------------------------- 139
Query 371 TGAAGGGGCGGCGGCAGCGGCACCCTCACCATCACAGCCAGCCCCTGCGCGCCAGCCCTGGTGGCAGCCGGGAG 444
Sbjct 140 -------------------------------------------------------------------------- 139
Query 445 GACGTCAGCAGGCCCTGCCAGAGCTGGGCGGGCAGCCGCCAGGGCTCCAAGGAGTGCCCCGGATGTGCCCAGCT 518
Sbjct 140 -------------------------------------------------------------------------- 139
Query 519 GGCTCCTGGCCCCACCCCTCGGGCCTTTGGGCTGGACCAGCCACCTCTGCCTGAGACCTCCGGTCGCCGCAAGA 592
Sbjct 140 -------------------------------------------------------------------------- 139
Query 593 AGCTGGAGAGGATGTACAGCGTTGACCGTGTGTCTGACGACATCCCTATTCGTACCTGGTTCCCCAAGGAAAAT 666
||||.||.|||||||||||||||||||||||.
Sbjct 140 ------------------------------------------TCCCCATCCGTACCTGGTTCCCCAAGGAAAAC 171
Query 667 CTTTTCAGCTTCCAGACAGCAACCACAACTATGCAAG------CGGTGTTCAGGGGCTACGCGGAGAGGAAGCG 734
|||||||||||||||||.||||||||||||||||||| ||||.||||||||||||||||||||||||||
Sbjct 172 CTTTTCAGCTTCCAGACGGCAACCACAACTATGCAAGCCATCTCGGTATTCAGGGGCTACGCGGAGAGGAAGCG 245
Query 735 CCGGAAACGGGAGAATGATTCCGCGTCTGTAATCCAGAGGAACTTCCGCAAACACCTGCGCATGGTCGGCAGCC 808
.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||.|
Sbjct 246 TCGGAAACGGGAGAATGATTCCGCGTCTGTAATCCAGAGGAACTTCCGCAAACACCTGCGCATGGTTGGCAGTC 319
Query 809 GGAGGGTGAAGGCCCAGACGTTCGCTGAGCGGCGCGAGCGGAGCTTCAGCCGGTCCTGGAGCGACCCCACCCCC 882
||.||||||||||||||||||||||||||||.|||||.|||||||||||||||||||||||||||||||||||.
Sbjct 320 GGCGGGTGAAGGCCCAGACGTTCGCTGAGCGTCGCGAACGGAGCTTCAGCCGGTCCTGGAGCGACCCCACCCCT 393
Query 883 ATGAAAGCCGACACTTCCCACGACTCCCGAGACAGCAGTGACCTGCAGAGCTCCCACTGCACGCTGGACGAGGC 956
||||||||||||||||||||||||||||||||||||||||||||.||||||||.||||||||.|||||.|||||
Sbjct 394 ATGAAAGCCGACACTTCCCACGACTCCCGAGACAGCAGTGACCTACAGAGCTCACACTGCACCCTGGATGAGGC 467
Query 957 CTTCGAGGACCTGGACTGGGACACTGAGAAGGGCCTGGAGGCTGTGGCCTGCGACACCGAAGGCTTCGTGCCAC 1030
.|..||||||||||||||||||||.|||||.||.||||||||..||||||||.|||||||.||||||.||||||
Sbjct 468 TTGTGAGGACCTGGACTGGGACACAGAGAAAGGTCTGGAGGCCATGGCCTGCAACACCGAGGGCTTCTTGCCAC 541
Query 1031 CAAAGGTCATGCTCATTTCCTCCAAGGTGCCCAAGGCTGAGTACATCCCCACTATCATCCGCCGGGATGACCCC 1104
|.||||||||||||||.||||||||||||||.|||||.|||||.|||||.||||||||||||.|.||||||||.
Sbjct 542 CCAAGGTCATGCTCATCTCCTCCAAGGTGCCAAAGGCCGAGTATATCCCTACTATCATCCGCAGAGATGACCCG 615
Query 1105 TCCATCATCCCCATCCTCTACGACCATGAGCACGCAACCTTCGAGGACATCCTTGAGGAGATAGAGAGGAAGCT 1178
||||||||.|||||||||||||||||.|||||.||||||||||||||||||||.|||||.|||||||.|||..|
Sbjct 616 TCCATCATTCCCATCCTCTACGACCACGAGCATGCAACCTTCGAGGACATCCTGGAGGAAATAGAGAAGAAATT 689
Query 1179 GAACGTCTACCACAAGGGAGCCAAGATCTGGAAAATGCTGATTTTCTGC------------------------- 1227
||||.||||.||||||||.||||||||||||||.|||||||||||||||
Sbjct 690 GAACATCTATCACAAGGGGGCCAAGATCTGGAAGATGCTGATTTTCTGCCAGGTAGAAGCAGCCTTTCCTTTCC 763
Query 1228 -------------------------------------------------------------------------- 1227
Sbjct 764 TCCCCAGGAAAAGAGGGCAGTGTGGTATGGGTAGGGCCCCAAGATCTTACTCAGTGTGGGCGTGTCCATGTGGT 837
Query 1228 -------------------------------------------------------------------------- 1227
Sbjct 838 ACATTTGTGGACGACATGCACACGCCTCATCCTAGCCTCCCCCTAGCACTCCTGAGGCCTGACCGTGACCTCTT 911
Query 1228 -CAGGGAGGTCCTGGACACCTCTATCTCCTCAAGAACAAGGTGGCCACCTTTGCCAAAGTGGAGAAGGAAGAGG 1300
|||||.||.|||||||||||.|||.|.||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 912 TCAGGGCGGCCCTGGACACCTTTATTTGCTCAAGAACAAGGTGGCCACCTTTGCCAAAGTGGAGAAGGAAGAGG 985
Query 1301 ACATGATTCACTTCTGGAAGCGGCTGAGCCGCCTGATGAGCAAAGTGAACCCAGAGCCGAACGTCATCCACATC 1374
|||||||.||||||||||||.||||||||||||||||||||||.||||||||.||||||||.||||||||||||
Sbjct 986 ACATGATCCACTTCTGGAAGAGGCTGAGCCGCCTGATGAGCAAGGTGAACCCCGAGCCGAATGTCATCCACATC 1059
Query 1375 ATGGGCTGCTACATTCTGGGGAACCCCAATGGAGAGAAGCTGTTCCAGAACCTCAGGACCCTCATGACTCCTTA 1448
||||||||||||||||||||||||||.||.||.||||||||.||||||||||||||||||||||||||.|||||
Sbjct 1060 ATGGGCTGCTACATTCTGGGGAACCCTAACGGGGAGAAGCTATTCCAGAACCTCAGGACCCTCATGACCCCTTA 1133
Query 1449 TAGGGTCACCTTCGAGTCACCCCTGGAGCTCTCAGCCCAAGGGAAGCAGATGATCGAGACGTACTTTGACTTCC 1522
.|.|||.|||||.|||||.||.||.|||||.||.||||||||||||||||||||.|||||.|||||||||||||
Sbjct 1134 CAAGGTTACCTTTGAGTCGCCTCTCGAGCTGTCTGCCCAAGGGAAGCAGATGATTGAGACCTACTTTGACTTCC 1207
Query 1523 GGTTGTATCGCCTGTGGAAGAGCCGCCAGCACTCGAAGCTGCTGGACTTTGACGACGTCCTG 1584
||.||||.||||||||||||||||||||||||||.|||||||||||||||||.|||||||||
Sbjct 1208 GGCTGTACCGCCTGTGGAAGAGCCGCCAGCACTCAAAGCTGCTGGACTTTGATGACGTCCTG 1269
