Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_02903
- Subject:
- XM_017319145.1
- Aligned Length:
- 1758
- Identities:
- 943
- Gaps:
- 732
Alignment
Query 1 ATGGGCGCCGCCGCCTCCAGGAGGAGGGCGCTGAGGAGCGAGGCCATGTCCTCGGTGGCGGCCAAAGTGCGAGC 74
|||||.||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||..||||
Sbjct 1 ATGGGTGCCGCCGCCTCCAGGAGGAGGGCGCTGAGGAGCGAGGCCATGTCCTCGGTAGCGGCCAAAGTAAGAGC 74
Query 75 AGCCCGAGCGTTTGGAGAGTACCTGTCCCAGAGTCACCCTGAGAACCGCAACGGCGCAGATCACCTGCTGGCTG 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||| ||
Sbjct 75 AGCCCGAGCGTTTGGAGAGTACCTGTCCCAGAGTCACCCTGAGAACCGCAACGGTGCAGA------------TG 136
Query 149 ATGCCTACTCTGGCCACGACGGGTCCCCCGAGATGCAGCCGGCCCCCCAGAACAAGCGCCGCCTGTCCCTCGTC 222
|||
Sbjct 137 ATG----------------------------------------------------------------------- 139
Query 223 TCCAACGGCTGCTACGAGGGCAGCCTCTCAGAGGAGCCCAGCATTAGGAAGCCCGCAGGCGAGGGCCCTCAGCC 296
Sbjct 140 -------------------------------------------------------------------------- 139
Query 297 TCGAGTGTACACCATCTCTGGGGAGCCTGCCCTGCTGCCCAGCCCTGAGGCGGAGGCCATTGAGCTGGCGGTGG 370
Sbjct 140 -------------------------------------------------------------------------- 139
Query 371 TGAAGGGGCGGCGGCAGCGGCACCCTCACCATCACAGCCAGCCCCTGCGCGCCAGCCCTGGTGGCAGCCGGGAG 444
Sbjct 140 -------------------------------------------------------------------------- 139
Query 445 GACGTCAGCAGGCCCTGCCAGAGCTGGGCGGGCAGCCGCCAGGGCTCCAAGGAGTGCCCCGGATGTGCCCAGCT 518
Sbjct 140 -------------------------------------------------------------------------- 139
Query 519 GGCTCCTGGCCCCACCCCTCGGGCCTTTGGGCTGGACCAGCCACCTCTGCCTGAGACCTCCGGTCGCCGCAAGA 592
Sbjct 140 -------------------------------------------------------------------------- 139
Query 593 AGCTGGAGAGGATGTACAGCGTTGACCGTGTGTCTGACGACATCCCTATTCGTACCTGGTTCCCCAAGGAAAAT 666
||||.||.|||||||||||||||||||||||.
Sbjct 140 ------------------------------------------TCCCCATCCGTACCTGGTTCCCCAAGGAAAAC 171
Query 667 CTTTTCAGCTTCCAGACAGCAACCACAACTATGCAAGCGGTGTTCAGGGGCTACGCGGAGAGGAAGCGCCGGAA 740
|||||||||||||||||.||||||||||||||||||||
Sbjct 172 CTTTTCAGCTTCCAGACGGCAACCACAACTATGCAAGC------------------------------------ 209
Query 741 ACGGGAGAATGATTCCGCGTCTGTAATCCAGAGGAACTTCCGCAAACACCTGCGCATGGTCGGCAGCCGGAGGG 814
|.||| .|||||||||||||||||||||||||||.|||||.|||.|||
Sbjct 210 -----------------CATCT----------CGAACTTCCGCAAACACCTGCGCATGGTTGGCAGTCGGCGGG 256
Query 815 TGAAGGCCCAGACGTTCGCTGAGCGGCGCGAGCGGAGCTTCAGCCGGTCCTGGAGCGACCCCACCCCCATGAAA 888
|||||||||||||||||||||||||.|||||.|||||||||||||||||||||||||||||||||||.||||||
Sbjct 257 TGAAGGCCCAGACGTTCGCTGAGCGTCGCGAACGGAGCTTCAGCCGGTCCTGGAGCGACCCCACCCCTATGAAA 330
Query 889 GCCGACACTTCCCACGACTCCCGAGACAGCAGTGACCTGCAGAGCTCCCACTGCACGCTGGACGAGGCCTTCGA 962
||||||||||||||||||||||||||||||||||||||.||||||||.||||||||.|||||.|||||.|..||
Sbjct 331 GCCGACACTTCCCACGACTCCCGAGACAGCAGTGACCTACAGAGCTCACACTGCACCCTGGATGAGGCTTGTGA 404
Query 963 GGACCTGGACTGGGACACTGAGAAGGGCCTGGAGGCTGTGGCCTGCGACACCGAAGGCTTCGTGCCACCAAAGG 1036
||||||||||||||||||.|||||.||.||||||||..||||||||.|||||||.||||||.|||||||.||||
Sbjct 405 GGACCTGGACTGGGACACAGAGAAAGGTCTGGAGGCCATGGCCTGCAACACCGAGGGCTTCTTGCCACCCAAGG 478
Query 1037 TCATGCTCATTTCCTCCAAGGTGCCCAAGGCTGAGTACATCCCCACTATCATCCGCCGGGATGACCCCTCCATC 1110
||||||||||.||||||||||||||.|||||.|||||.|||||.||||||||||||.|.||||||||.||||||
Sbjct 479 TCATGCTCATCTCCTCCAAGGTGCCAAAGGCCGAGTATATCCCTACTATCATCCGCAGAGATGACCCGTCCATC 552
Query 1111 ATCCCCATCCTCTACGACCATGAGCACGCAACCTTCGAGGACATCCTTGAGGAGATAGAGAGGAAGCTGAACGT 1184
||.|||||||||||||||||.|||||.||||||||||||||||||||.|||||.|||||||.|||..|||||.|
Sbjct 553 ATTCCCATCCTCTACGACCACGAGCATGCAACCTTCGAGGACATCCTGGAGGAAATAGAGAAGAAATTGAACAT 626
Query 1185 CTACCACAAGGGAGCCAAGATCTGGAAAATGCTGATTTTCTGC------------------------------- 1227
|||.||||||||.||||||||||||||.|||||||||||||||
Sbjct 627 CTATCACAAGGGGGCCAAGATCTGGAAGATGCTGATTTTCTGCCAGGTAGAAGCAGCCTTTCCTTTCCTCCCCA 700
Query 1228 -------------------------------------------------------------------------- 1227
Sbjct 701 GGAAAAGAGGGCAGTGTGGTATGGGTAGGGCCCCAAGATCTTACTCAGTGTGGGCGTGTCCATGTGGTACATTT 774
Query 1228 ---------------------------------------------------------------------CAGGG 1232
|||||
Sbjct 775 GTGGACGACATGCACACGCCTCATCCTAGCCTCCCCCTAGCACTCCTGAGGCCTGACCGTGACCTCTTTCAGGG 848
Query 1233 AGGTCCTGGACACCTCTATCTCCTCAAGAACAAGGTGGCCACCTTTGCCAAAGTGGAGAAGGAAGAGGACATGA 1306
.||.|||||||||||.|||.|.||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 849 CGGCCCTGGACACCTTTATTTGCTCAAGAACAAGGTGGCCACCTTTGCCAAAGTGGAGAAGGAAGAGGACATGA 922
Query 1307 TTCACTTCTGGAAGCGGCTGAGCCGCCTGATGAGCAAAGTGAACCCAGAGCCGAACGTCATCCACATCATGGGC 1380
|.||||||||||||.||||||||||||||||||||||.||||||||.||||||||.||||||||||||||||||
Sbjct 923 TCCACTTCTGGAAGAGGCTGAGCCGCCTGATGAGCAAGGTGAACCCCGAGCCGAATGTCATCCACATCATGGGC 996
Query 1381 TGCTACATTCTGGGGAACCCCAATGGAGAGAAGCTGTTCCAGAACCTCAGGACCCTCATGACTCCTTATAGGGT 1454
||||||||||||||||||||.||.||.||||||||.||||||||||||||||||||||||||.|||||.|.|||
Sbjct 997 TGCTACATTCTGGGGAACCCTAACGGGGAGAAGCTATTCCAGAACCTCAGGACCCTCATGACCCCTTACAAGGT 1070
Query 1455 CACCTTCGAGTCACCCCTGGAGCTCTCAGCCCAAGGGAAGCAGATGATCGAGACGTACTTTGACTTCCGGTTGT 1528
.|||||.|||||.||.||.|||||.||.||||||||||||||||||||.|||||.|||||||||||||||.|||
Sbjct 1071 TACCTTTGAGTCGCCTCTCGAGCTGTCTGCCCAAGGGAAGCAGATGATTGAGACCTACTTTGACTTCCGGCTGT 1144
Query 1529 ATCGCCTGTGGAAGAGCCGCCAGCACTCGAAGCTGCTGGACTTTGACGACGTCCTG 1584
|.||||||||||||||||||||||||||.|||||||||||||||||.|||||||||
Sbjct 1145 ACCGCCTGTGGAAGAGCCGCCAGCACTCAAAGCTGCTGGACTTTGATGACGTCCTG 1200
