Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_02903
Subject:
XM_017319145.1
Aligned Length:
1758
Identities:
943
Gaps:
732

Alignment

Query    1  ATGGGCGCCGCCGCCTCCAGGAGGAGGGCGCTGAGGAGCGAGGCCATGTCCTCGGTGGCGGCCAAAGTGCGAGC  74
            |||||.||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||..||||
Sbjct    1  ATGGGTGCCGCCGCCTCCAGGAGGAGGGCGCTGAGGAGCGAGGCCATGTCCTCGGTAGCGGCCAAAGTAAGAGC  74

Query   75  AGCCCGAGCGTTTGGAGAGTACCTGTCCCAGAGTCACCCTGAGAACCGCAACGGCGCAGATCACCTGCTGGCTG  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||            ||
Sbjct   75  AGCCCGAGCGTTTGGAGAGTACCTGTCCCAGAGTCACCCTGAGAACCGCAACGGTGCAGA------------TG  136

Query  149  ATGCCTACTCTGGCCACGACGGGTCCCCCGAGATGCAGCCGGCCCCCCAGAACAAGCGCCGCCTGTCCCTCGTC  222
            |||                                                                       
Sbjct  137  ATG-----------------------------------------------------------------------  139

Query  223  TCCAACGGCTGCTACGAGGGCAGCCTCTCAGAGGAGCCCAGCATTAGGAAGCCCGCAGGCGAGGGCCCTCAGCC  296
                                                                                      
Sbjct  140  --------------------------------------------------------------------------  139

Query  297  TCGAGTGTACACCATCTCTGGGGAGCCTGCCCTGCTGCCCAGCCCTGAGGCGGAGGCCATTGAGCTGGCGGTGG  370
                                                                                      
Sbjct  140  --------------------------------------------------------------------------  139

Query  371  TGAAGGGGCGGCGGCAGCGGCACCCTCACCATCACAGCCAGCCCCTGCGCGCCAGCCCTGGTGGCAGCCGGGAG  444
                                                                                      
Sbjct  140  --------------------------------------------------------------------------  139

Query  445  GACGTCAGCAGGCCCTGCCAGAGCTGGGCGGGCAGCCGCCAGGGCTCCAAGGAGTGCCCCGGATGTGCCCAGCT  518
                                                                                      
Sbjct  140  --------------------------------------------------------------------------  139

Query  519  GGCTCCTGGCCCCACCCCTCGGGCCTTTGGGCTGGACCAGCCACCTCTGCCTGAGACCTCCGGTCGCCGCAAGA  592
                                                                                      
Sbjct  140  --------------------------------------------------------------------------  139

Query  593  AGCTGGAGAGGATGTACAGCGTTGACCGTGTGTCTGACGACATCCCTATTCGTACCTGGTTCCCCAAGGAAAAT  666
                                                      ||||.||.|||||||||||||||||||||||.
Sbjct  140  ------------------------------------------TCCCCATCCGTACCTGGTTCCCCAAGGAAAAC  171

Query  667  CTTTTCAGCTTCCAGACAGCAACCACAACTATGCAAGCGGTGTTCAGGGGCTACGCGGAGAGGAAGCGCCGGAA  740
            |||||||||||||||||.||||||||||||||||||||                                    
Sbjct  172  CTTTTCAGCTTCCAGACGGCAACCACAACTATGCAAGC------------------------------------  209

Query  741  ACGGGAGAATGATTCCGCGTCTGTAATCCAGAGGAACTTCCGCAAACACCTGCGCATGGTCGGCAGCCGGAGGG  814
                             |.|||          .|||||||||||||||||||||||||||.|||||.|||.|||
Sbjct  210  -----------------CATCT----------CGAACTTCCGCAAACACCTGCGCATGGTTGGCAGTCGGCGGG  256

Query  815  TGAAGGCCCAGACGTTCGCTGAGCGGCGCGAGCGGAGCTTCAGCCGGTCCTGGAGCGACCCCACCCCCATGAAA  888
            |||||||||||||||||||||||||.|||||.|||||||||||||||||||||||||||||||||||.||||||
Sbjct  257  TGAAGGCCCAGACGTTCGCTGAGCGTCGCGAACGGAGCTTCAGCCGGTCCTGGAGCGACCCCACCCCTATGAAA  330

Query  889  GCCGACACTTCCCACGACTCCCGAGACAGCAGTGACCTGCAGAGCTCCCACTGCACGCTGGACGAGGCCTTCGA  962
            ||||||||||||||||||||||||||||||||||||||.||||||||.||||||||.|||||.|||||.|..||
Sbjct  331  GCCGACACTTCCCACGACTCCCGAGACAGCAGTGACCTACAGAGCTCACACTGCACCCTGGATGAGGCTTGTGA  404

Query  963  GGACCTGGACTGGGACACTGAGAAGGGCCTGGAGGCTGTGGCCTGCGACACCGAAGGCTTCGTGCCACCAAAGG  1036
            ||||||||||||||||||.|||||.||.||||||||..||||||||.|||||||.||||||.|||||||.||||
Sbjct  405  GGACCTGGACTGGGACACAGAGAAAGGTCTGGAGGCCATGGCCTGCAACACCGAGGGCTTCTTGCCACCCAAGG  478

Query 1037  TCATGCTCATTTCCTCCAAGGTGCCCAAGGCTGAGTACATCCCCACTATCATCCGCCGGGATGACCCCTCCATC  1110
            ||||||||||.||||||||||||||.|||||.|||||.|||||.||||||||||||.|.||||||||.||||||
Sbjct  479  TCATGCTCATCTCCTCCAAGGTGCCAAAGGCCGAGTATATCCCTACTATCATCCGCAGAGATGACCCGTCCATC  552

Query 1111  ATCCCCATCCTCTACGACCATGAGCACGCAACCTTCGAGGACATCCTTGAGGAGATAGAGAGGAAGCTGAACGT  1184
            ||.|||||||||||||||||.|||||.||||||||||||||||||||.|||||.|||||||.|||..|||||.|
Sbjct  553  ATTCCCATCCTCTACGACCACGAGCATGCAACCTTCGAGGACATCCTGGAGGAAATAGAGAAGAAATTGAACAT  626

Query 1185  CTACCACAAGGGAGCCAAGATCTGGAAAATGCTGATTTTCTGC-------------------------------  1227
            |||.||||||||.||||||||||||||.|||||||||||||||                               
Sbjct  627  CTATCACAAGGGGGCCAAGATCTGGAAGATGCTGATTTTCTGCCAGGTAGAAGCAGCCTTTCCTTTCCTCCCCA  700

Query 1228  --------------------------------------------------------------------------  1227
                                                                                      
Sbjct  701  GGAAAAGAGGGCAGTGTGGTATGGGTAGGGCCCCAAGATCTTACTCAGTGTGGGCGTGTCCATGTGGTACATTT  774

Query 1228  ---------------------------------------------------------------------CAGGG  1232
                                                                                 |||||
Sbjct  775  GTGGACGACATGCACACGCCTCATCCTAGCCTCCCCCTAGCACTCCTGAGGCCTGACCGTGACCTCTTTCAGGG  848

Query 1233  AGGTCCTGGACACCTCTATCTCCTCAAGAACAAGGTGGCCACCTTTGCCAAAGTGGAGAAGGAAGAGGACATGA  1306
            .||.|||||||||||.|||.|.||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  849  CGGCCCTGGACACCTTTATTTGCTCAAGAACAAGGTGGCCACCTTTGCCAAAGTGGAGAAGGAAGAGGACATGA  922

Query 1307  TTCACTTCTGGAAGCGGCTGAGCCGCCTGATGAGCAAAGTGAACCCAGAGCCGAACGTCATCCACATCATGGGC  1380
            |.||||||||||||.||||||||||||||||||||||.||||||||.||||||||.||||||||||||||||||
Sbjct  923  TCCACTTCTGGAAGAGGCTGAGCCGCCTGATGAGCAAGGTGAACCCCGAGCCGAATGTCATCCACATCATGGGC  996

Query 1381  TGCTACATTCTGGGGAACCCCAATGGAGAGAAGCTGTTCCAGAACCTCAGGACCCTCATGACTCCTTATAGGGT  1454
            ||||||||||||||||||||.||.||.||||||||.||||||||||||||||||||||||||.|||||.|.|||
Sbjct  997  TGCTACATTCTGGGGAACCCTAACGGGGAGAAGCTATTCCAGAACCTCAGGACCCTCATGACCCCTTACAAGGT  1070

Query 1455  CACCTTCGAGTCACCCCTGGAGCTCTCAGCCCAAGGGAAGCAGATGATCGAGACGTACTTTGACTTCCGGTTGT  1528
            .|||||.|||||.||.||.|||||.||.||||||||||||||||||||.|||||.|||||||||||||||.|||
Sbjct 1071  TACCTTTGAGTCGCCTCTCGAGCTGTCTGCCCAAGGGAAGCAGATGATTGAGACCTACTTTGACTTCCGGCTGT  1144

Query 1529  ATCGCCTGTGGAAGAGCCGCCAGCACTCGAAGCTGCTGGACTTTGACGACGTCCTG  1584
            |.||||||||||||||||||||||||||.|||||||||||||||||.|||||||||
Sbjct 1145  ACCGCCTGTGGAAGAGCCGCCAGCACTCAAAGCTGCTGGACTTTGATGACGTCCTG  1200