Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_02948
• Subject: XM_011519982.1
• Aligned Length: 1514
• Identities: 834
• Gaps: 664

Alignment

Query    1  ATGGCGGCCATGGAGACCGAGACGGCGCCGCTGACCCTAGAGTCGCTGCCCACCGATCCCCTGCTCCTCATCTT  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  ATCCTTTTTGGACTATCGGGATCTAATCAACTGTTGTTATGTCAGTCGAAGACTTAGCCAGCTATCAAGTCATG  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  ATCCGCTGTGGAGAAGACATTGCAAAAAATACTGGCTGATATCTGAGGAAGAGAAAACACAGAAGAATCAGTGT  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  TGGAAATCTCTCTTCATAGATACTTACTCTGATGTAGGAAGATACATTGACCATTATGCTGCTATTAAAAAGGC  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  CTGGGATGATCTCAAGAAATATTTGGAGCCCAGGTGTCCTCGGATGGTTTTATCTCTGAAAGAGGGTGCTCGAG  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  AGGAAGACCTCGATGCTGTGGAAGCGCAGATTGGCTGCAAGCTTCCTGACGATTATCGATGTTCATACCGAATT  444
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  445  CACAATGGACAGAAGTTAGTGGTTCCTGGGTTATTGGGAAGCATGGCACTGTCTAATCACTATCGTTCTGAAGA  518
                                                      ||||||||||||||||||||||||||||||||
Sbjct    1  ------------------------------------------ATGGCACTGTCTAATCACTATCGTTCTGAAGA  32

Query  519  TTTGTTAGACGTCGATACAGCTGCCGGAGGATTCCAGCAGAGACAGGGACTGAAATACTGTCTCCCTTTAACTT  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   33  TTTGTTAGACGTCGATACAGCTGCCGGAGGATTCCAGCAGAGACAGGGACTGAAATACTGTCTCCCTTTAACTT  106

Query  593  TTTGCATACATACTGGTTTGAGTCAGTACATAGCAGTGGAAGCTGCAGAGGGCCGAAACAAAAATGAAGTTTTC  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  107  TTTGCATACATACTGGTTTGAGTCAGTACATAGCAGTGGAAGCTGCAGAGGGCCGAAACAAAAATGAAGTTTTC  180

Query  667  TACCAATGTCCAGACCAAATGGCTCGAAATCCAGCTGCTATTGACATGTTTATTATAGGTGCTACTTTTACTGA  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  181  TACCAATGTCCAGACCAAATGGCTCGAAATCCAGCTGCTATTGACATGTTTATTATAGGTGCTACTTTTACTGA  254

Query  741  CTGGTTTACCTCTTATGTCAAAAATGTTGTATCAGGTGGCTTCCCCATCATCAGAGACCAAATTTTCAGATATG  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  255  CTGGTTTACCTCTTATGTCAAAAATGTTGTATCAGGTGGCTTCCCCATCATCAGAGACCAAATTTTCAGATATG  328

Query  815  TTCACGATCCAGAATGTGTAGCAACAACTGGGGATATTACTGTGTCAGTTTCCACATCGTTTCTGCCAGAACTT  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  329  TTCACGATCCAGAATGTGTAGCAACAACTGGGGATATTACTGTGTCAGTTTCCACATCGTTTCTGCCAGAACTT  402

Query  889  AGCTCTGTACATCCACCCCACTATTTCTTCACATACCGAATCAGGATTGAAATGTCAAAAGATGCACTTCCTGA  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  403  AGCTCTGTACATCCACCCCACTATTTCTTCACATACCGAATCAGGATTGAAATGTCAAAAGATGCACTTCCTGA  476

Query  963  GAAGGCCTGTCAGTTGGACAGTCGCTATTGGAGAATAACAAATGCTAAGGGTGACGTGGAAGAAGTTCAAGGAC  1036
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  477  GAAGGCCTGTCAGTTGGACAGTCGCTATTGGAGAATAACAAATGCTAAGGGTGACGTGGAAGAAGTTCAAGGAC  550

Query 1037  CTGGAGTAGTTGGTGAATTTCCAATCATCAGCCCAGGTCGGGTATATGAATACACAAGCTGTACCACATTCTCT  1110
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  551  CTGGAGTAGTTGGTGAATTTCCAATCATCAGCCCAGGTCGGGTATATGAATACACAAGCTGTACCACATTCTCT  624

Query 1111  ACAACATCAGGATACATGGAAGGATATTATACCTTCCATTTTCTTTACTTTAAAGACAAGATCTTTAATGTTGC  1184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  625  ACAACATCAGGATACATGGAAGGATATTATACCTTCCATTTTCTTTACTTTAAAGACAAGATCTTTAATGTTGC  698

Query 1185  CATTCCCCGATTCCATATGGCATGTCCAACATTCAGGGTGTCTATAGCCCGATT--------------------  1238
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||                    
Sbjct  699  CATTCCCCGATTCCATATGGCATGTCCAACATTCAGGGTGTCTATAGCCCGATTGCCTAGGGTTCTGTCTTTCT  772

Query 1239  ------GGAAATGGGT---------CCTG-------ATGAATATGAAG---AG-----ATG----------GAA  1272
                  |||.|||.||         ||||       |||  ||.||||   ||     |||          |.|
Sbjct  773  CTCCTGGGACATGTGTCTTTGACACCCTGAGCCACCATG--TAAGAAGTCCAGCTACCATGAAGCCGTCATGCA  844

Query 1273  GAAGAG-----GAGGAG----------GAGGAAGA-GGAGGAAGACGAGGA-----TGATGATTCAG----CAG  1321
            ||||||     |..|||          |||..||| |||||.| .|.||||     .|.||.|||||    |||
Sbjct  845  GAAGAGACCATGTAGAGACATCACACAGAGATAGAGGGAGGCA-CCCAGGAGCCCCAGCTGTTTCAGACTCCAG  917

Query 1322  ATA--TGGAT------------GAATCAG--ATGAAGATGATGAAGAGGAGAGACGGAGGAGAGTCTTTGATGT  1379
            |||  |||||            |.|.|||  |||                                        
Sbjct  918  ATATTTGGATCATCCTGCGCGGGTACCAGACATG----------------------------------------  951

Query 1380  TCCCATTCGCAGACGCCGCTGCTCACGCCTTTTT  1413
                                              
Sbjct  952  ----------------------------------  951