Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_02962
- Subject:
- XM_017020540.2
- Aligned Length:
- 2661
- Identities:
- 1365
- Gaps:
- 1296
Alignment
Query 1 ATGCCCATCTTACTGTTCCTGATAGACACGTCTGCCTCTATGAACCAGCGCAGCCATCTGGGCACCACCTACCT 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 GGACACGGCCAAAGGCGCGGTAGAGACCTTCATGAAGCTCCGTGCCCGGGACCCTGCCAGCAGAGGAGACAGGT 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 ATATGCTGGTCACTTTCGAAGAGCCGCCCTATGCTATCAAGGCTGGATGGAAAGAAAACCATGCAACGTTTATG 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 AATGAATTGAAAAACCTTCAGGCTGAAGGACTTACGACTCTTGGCCAATCCCTAAGGACAGCTTTTGATTTATT 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 AAATTTAAATAGATTAGTAACTGGCATAGACAACTATGGGCAGGGAAGAAACCCTTTTTTCTTGGAGCCAGCAA 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 TAATTATCACAATTACTGATGGGAGCAAGTTGACTACCACCAGTGGAGTCCAGGATGAGCTTCATTTACCTCTT 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 AATTCTCCTTTGCCTGGAAGTGAATTGACCAAGGAACCTTTTCGTTGGGATCAGAGACTCTTTGCATTAGTGTT 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 GCGGTTGCCTGGCACCATGTCAGTAGAATCAGAACAGTTGACAGGTGTGCCTTTAGATGACTCTGCAATCACAC 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 CAATGTGTGAAGTGACAGGCGGCCGTTCATATTCTGTGTGTTCTCCAAGAATGCTTAATCAGTGTCTGGAGTCC 666
Sbjct 1 -------------------------------------------------------------------------- 0
Query 667 TTGGTGCAGAAAGTACAAAGTGGGGTGGTAATAAACTTTGAAAAAGCAGGACCAGATCCTTCCCCTGTAGAAGA 740
Sbjct 1 -------------------------------------------------------------------------- 0
Query 741 TGGGCAGCCAGATATATCAAGGCCTTTTGGATCTCAGCCTTGGCATAGCTGTCACAAACTCATATATGTCAGAC 814
Sbjct 1 -------------------------------------------------------------------------- 0
Query 815 CAAATCCTAAAACTGGGGTTCCTATAGGTCATTGGCCTGTTCCAGAGTCTTTTTGGCCAGATCAAAATTCGCCA 888
Sbjct 1 -------------------------------------------------------------------------- 0
Query 889 ACACTACCACCTCGTACATCTCATCCTGTAGTGAAGTTTTCCTGTACAGACTGTGAACCAATGGTTATTGATAA 962
Sbjct 1 -------------------------------------------------------------------------- 0
Query 963 ACTTCCTTTTGACAAATATGAGTTGGAACCTTCACCACTGACTCAATTTATCCTGGAAAGGAAATCTCCTCAAA 1036
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1037 CATGTTGGCAGGTGTACGTGAGCAATAGTGCAAAATACAGTGAACTTGGTCATCCTTTTGGTTACTTGAAAGCC 1110
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1111 AGTACAGCACTGAACTGTGTCAACTTATTTGTGATGCCTTACAATTATCCAGTCCTTCTTCCCCTCTTAGATGA 1184
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1185 CTTGTTTAAAGTGCATAAAGCAAAACCAACATTGAAGTGGAGACAGTCATTTGAAAGTTATTTGAAGACAATGC 1258
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1259 CTCCCTACTATCTTGGGCCCTTGAAGAAAGCTGTTAGGATGATGGGAGCACCTAACCTAATAGCAGACAGTATG 1332
||||||||||||||||||||||||||||||||||||
Sbjct 1 --------------------------------------ATGATGGGAGCACCTAACCTAATAGCAGACAGTATG 36
Query 1333 GAATATGGACTTAGTTACAGTGTCATTTCATACCTCAAAAAACTGAGTCAACAGGCCAAAATAGAATCTGATCG 1406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 37 GAATATGGACTTAGTTACAGTGTCATTTCATACCTCAAAAAACTGAGTCAACAGGCCAAAATAGAATCTGATCG 110
Query 1407 AGTCATTGGATCTGTAGGCAAAAAAGTAGTACAGGAGACTGGAATAAAAGTCCGGAGCCGATCACATGGTTTAT 1480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 111 AGTCATTGGATCTGTAGGCAAAAAAGTAGTACAGGAGACTGGAATAAAAGTCCGGAGCCGATCACATGGTTTAT 184
Query 1481 CAATGGCATATAGGAAAGATTTTCAACAACTCCTCCAGGGAATTTCAGAGGATGTCCCTCACAGACTGCTAGAC 1554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 185 CAATGGCATATAGGAAAGATTTTCAACAACTCCTCCAGGGAATTTCAGAGGATGTCCCTCACAGACTGCTAGAC 258
Query 1555 CTTAATATGAAGGAATACACTGGGTTCCAAGTTGCTTTGCTGAATAAGGATTTGAAGCCACAGACATTTAGAAA 1628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 259 CTTAATATGAAGGAATACACTGGGTTCCAAGTTGCTTTGCTGAATAAGGATTTGAAGCCACAGACATTTAGAAA 332
Query 1629 TGCTTATGACATACCAAGACGAAATCTTTTGGATCACTTAACAAGAATGAGATCTAATCTTTTGAAGAGCACTC 1702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 333 TGCTTATGACATACCAAGACGAAATCTTTTGGATCACTTAACAAGAATGAGATCTAATCTTTTGAAGAGCACTC 406
Query 1703 GCAGATTTCTGAAAGGACAGGACGAAGATCAAGTGCACAGTGTTCCTATAGCACAAATGGGGAACTACCAGGAA 1776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 407 GCAGATTTCTGAAAGGACAGGACGAAGATCAAGTGCACAGTGTTCCTATAGCACAAATGGGGAACTACCAGGAA 480
Query 1777 TACCTCAAGCAAGTACCTTCTCCACTAAGAGAACTTGATCCTGATCAGCCACGAAGGTTGCATACATTTGGCAA 1850
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 481 TACCTCAAGCAAGTACCTTCTCCACTAAGAGAACTTGATCCTGATCAGCCACGAAGGTTGCATACATTTGGCAA 554
Query 1851 CCCCTTTAAGCTGGATAAGAAGGGTATGATGATAGATGAAGCAGATGAATTTGTGGCTGGACCTCAAAATAAAC 1924
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 555 CCCCTTTAAGCTGGATAAGAAGGGTATGATGATAGATGAAGCAGATGAATTTGTGGCTGGACCTCAAAATAAAC 628
Query 1925 ATAAACGACCCGGAGAACCAAATATGCAAGGGATCCCTAAAAGACGTCGGTGTATGTCTCCACTACTAAGAGGC 1998
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 629 ATAAACGACCCGGAGAACCAAATATGCAAGGGATCCCTAAAAGACGTCGGTGTATGTCTCCACTACTAAGAGGC 702
Query 1999 AGACAGCAGAATCCTGTTGTAAACAATCATATTGGGGGAAAAGGACCACCTGCACCTACAACTCAAGCACAGCC 2072
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 703 AGACAGCAGAATCCTGTTGTAAACAATCATATTGGGGGAAAAGGACCACCTGCACCTACAACTCAAGCACAGCC 776
Query 2073 AGATCTTATTAAACCTCTTCCTCTTCATAAAATTTCAGAAACCACTAATGATTCGATAATACATGATGTGGTTG 2146
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 777 AGATCTTATTAAACCTCTTCCTCTTCATAAAATTTCAGAAACCACTAATGATTCGATAATACATGATGTGGTTG 850
Query 2147 AAAATCATGTTGCAGACCAACTTTCATCAGACATTACACCAAATGCTATGGATACGGAATTTTCAGCATCTTCT 2220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 851 AAAATCATGTTGCAGACCAACTTTCATCAGACATTACACCAAATGCTATGGATACGGAATTTTCAGCATCTTCT 924
Query 2221 CCAGCCAGTTTACTGGAACGGCCAACCAATCATATGGAGGCTCTTGGTCATGACCATTTAGGAACCAATGACCT 2294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 925 CCAGCCAGTTTACTGGAACGGCCAACCAATCATATGGAGGCTCTTGGTCATGACCATTTAGGAACCAATGACCT 998
Query 2295 CACTGTTGGTGGATTTTTAGAAAATCATGAGGAGCCAAGAGATAAAGAACAATGTGCTGAAGAGAACATACCAG 2368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 999 CACTGTTGGTGGATTTTTAGAAAATCATGAGGAGCCAAGAGATAAAGAACAATGTGCTGAAGAGAACATACCAG 1072
Query 2369 CATCTTCACTCAACAAAGGAAAGAAATTGATGCATTGCAGAAGCCATGAAGAGGTCAATACTGAACTAAAAGCA 2442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1073 CATCTTCACTCAACAAAGGAAAGAAATTGATGCATTGCAGAAGCCATGAAGAGGTCAATACTGAACTAAAAGCA 1146
Query 2443 CAAATAATGAAAGAGATCCGAAAGCCAGGAAGAAAATATGAAAGAATCTTCACTTTACTGAAGCATGTGCAAGG 2516
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1147 CAAATAATGAAAGAGATCCGAAAGCCAGGAAGAAAATATGAAAGAATCTTCACTTTACTGAAGCATGTGCAAGG 1220
Query 2517 CAGTTTACAAACAAGACTAATATTTTTACAAAATGTCATTAAAGAAGCATCAAGGTTTAAAAAACGAATGCTAA 2590
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1221 CAGTTTACAAACAAGACTAATATTTTTACAAAATGTCATTAAAGAAGCATCAAGGTTTAAAAAACGAATGCTAA 1294
Query 2591 TAGAACAACTGGAGAACTTCTTGGATGAAATTCATCGAAGAGCCAATCAGATCAACCATATTAATAGCAAT 2661
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1295 TAGAACAACTGGAGAACTTCTTGGATGAAATTCATCGAAGAGCCAATCAGATCAACCATATTAATAGCAAT 1365
