Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_03082
- Subject:
- NR_126037.1
- Aligned Length:
- 2758
- Identities:
- 811
- Gaps:
- 1947
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CACAACCCCAACTCAGAGAAGCCAAAGCGCTGGGAATTCAGCTTTAGGCAGAACCCACGCAATCTTATATCCGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGCGCAGTGATGACGTAGCGCGAGCGCTGGCATGAGGGCGGAGCCAGGCGCAGGAAACTGCCGTTTTGATTGGT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TTCCAGTGTGGCGCGGGGGTCTCCTGGGATCCGAAAGAACCTGCCTTTCCGCCCGGAAGTCGGCGTCTTGAGTC 222
Query 1 -----------------------------------ATGGCGGGGAAGAAGAATGTTCTGTCGTCTCTCGCAGTT 39
|||||||||||||||||||||||||||||||||||||||
Sbjct 223 ATAGGAGTGAGCCACGCCCGGGCTGTGGGAATAAGATGGCGGGGAAGAAGAATGTTCTGTCGTCTCTCGCAGTT 296
Query 40 TACGCGGAAGATTCAGAGCCCGAGTCTGATGGCGAGGCTGGAATCGAGGCGGTGGGCAGCGCGGCTGAGGAGAA 113
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TACGCGGAAGATTCAGAGCCCGAGTCTGATGGCGAGGCTGGAATCGAGGCGGTGGGCAGCGCGGCTGAGGAGAA 370
Query 114 AGGCGGATTGGTATCTGATGCCTATGGGGAGGATGACTTTTCTCGTCTAGGGGGTGATGAAGATGGTTATGAAG 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AGGCGGATTGGTATCTGATGCCTATGGGGAGGATGACTTTTCTCGTCTAGGGGGTGATGAAGATGGTTATGAAG 444
Query 188 AAGAAGAAGATGAGAACAGTAGACAGTCGGAAGATGACGATTCAGAGACTGAAAAACCTGAGGCTGATGACCCA 261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 AAGAAGAAGATGAGAACAGTAGACAGTCGGAAGATGACGATTCAGAGACTGAAAAACCTGAGGCTGATGACCCA 518
Query 262 AAGGATAATACAGAAGCAGAAAAGCGAGACCCCCAGGAACTCGTGGCCTCCTTTTCTGAAAGAGTTCGGAACAT 335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 AAGGATAATACAGAAGCAGAAAAGCGAGACCCCCAGGAACTCGTGGCCTCCTTTTCTGAAAGAGTTCGGAACAT 592
Query 336 GTCGCCTGATGAAATCAAGATCCCGCCAGAACCCCCTGGCAGATGTTCAAATCACTTGCAAGACAAGATCCAGA 409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GTCGCCTGATGAAATCAAGATCCCGCCAGAACCCCCTGGCAGATGTTCAAATCACTTGCAAGACAAGATCCAGA 666
Query 410 AGCTTTATGAACGAAAGATAAAGGAGGGAATGGATATGAACTACATTATCCAAAGGAAGAAAGAATTTCGGAAC 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 AGCTTTATGAACGAAAGATAAAGGAGGGAATGGATATGAACTACATTATCCAAAGGAAGAAAGAATTTCGGAAC 740
Query 484 CCTAGCATCTACGAGAAGCTGATCCAGTTCTGTGCCATTGACGAGCTTGGCACCAACTACCCAAAGGATATGTT 557
||
Sbjct 741 CC------------------------------------------------------------------------ 742
Query 558 TGATCCCCATGGCTGGTCTGAGGACTCCTACTATGAGGCATTAGCCAAGGCCCAGAAAATTGAGATGGACAAAT 631
|||||||||||||||||||||||||||||||||
Sbjct 743 -----------------------------------------TAGCCAAGGCCCAGAAAATTGAGATGGACAAAT 775
Query 632 TGGAAAAGGCCAAAAAGGAGCGAACAAAAATTGAGTTTGTGACGGGCACCAAAAAAGGCACCACGACCAACGCC 705
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 776 TGGAAAAGGCCAAAAAGGAGCGAACAAAAATTGAGTTTGTGACGGGCACCAAAAAAGGCACCACGACCAACGCC 849
Query 706 ACGTCCACCACCACTACCACTGCCAGCACAGCTGTTGCAGATGCTCAGAAGAGAAAGAGCAAGTGGGATTCGGC 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 850 ACGTCCACCACCACTACCACTGCCAGCACAGCTGTTGCAGATGCTCAGAAGAGAAAGAGCAAGTGGGATTCGGC 923
Query 780 TATCCCAGTGACAACGATAGCCCAGCCCACCATCCTCACCACCACAGCCACCCTGCCAGCTGTTGTCACGGTCA 853
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 924 TATCCCAGTGACAACGATAGCCCAGCCCACCATCCTCACCACCACAGCCACCCTGCCAGCTGTTGTCACGGTCA 997
Query 854 CCACCAGCGCCAGCGGCTCCAAGACCACCGTCATCTCTGCTGTGGGCACCATTGTGAAGAAGGCCAAGCAG--- 924
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 998 CCACCAGCGCCAGCGGCTCCAAGACCACCGTCATCTCTGCTGTGGGCACCATTGTGAAGAAGGCCAAGCAGTGA 1071
Query 925 -------------------------------------------------------------------------- 924
Sbjct 1072 CCTGAGGGGCCACCCTAGGACTTGAAAGGACCGTGCAGCCCAGTGACCACTGCCCAGTGGGAGGCGCCACTTTG 1145
Query 925 -------------------------------------------------------------------------- 924
Sbjct 1146 TATATTTCAGGACTGGGACCTACTCCCCAGATGCCACCTGAGAGGAGCTTCTGTTTGGCATTCCAGATGGAAGG 1219
Query 925 -------------------------------------------------------------------------- 924
Sbjct 1220 ACAGGCAGCACGGGAGCCAGGCGCTGTGGACAGGGTCTGTCCACGCACCACCTGGGGTCTGCCGCCTATTAAAA 1293
Query 925 -------------------------------------------------------------------------- 924
Sbjct 1294 GTGCCGTATTCTTACCTCTTGGCATCTCAGATGCACTGGCCTCTCCTGCATTCTGTTTGCAGGCAAATGCTTCA 1367
Query 925 -------------------------------------------------------------------------- 924
Sbjct 1368 GCTCACATGTCCCCCAAGACTCAATAGTCTTGGTTGGGACTATTGCCTCAGGGTTGACAACAGGGTGATGGAGG 1441
Query 925 -------------------------------------------------------------------------- 924
Sbjct 1442 CCTGGGACGCTGTTCAGAGGGGTGACCCAAGAAGTCACCGTTGTTATCCGTGTATGCCTCTGGGCATGGACAGG 1515
Query 925 -------------------------------------------------------------------------- 924
Sbjct 1516 CGGGAGTCCCCGAGCCCCACGTATGCCCCATCTGCCGCCTTGATCCCAAAACCCAGCCAGTTCTCGGGTGATGG 1589
Query 925 -------------------------------------------------------------------------- 924
Sbjct 1590 TGGAGCTGTGCTCCCTTGAGTGCACTTGAGCACTCCCCAGACCAGATCACTTTTTGGACACACCCAGGAAGGCT 1663
Query 925 -------------------------------------------------------------------------- 924
Sbjct 1664 TTTGAAGTCAAGCCAGTTTCCAGAAGGGCTGGGGTGAGATCCTGACCTGTGCAGAGAGTGGGGAGGCGTCAGCG 1737
Query 925 -------------------------------------------------------------------------- 924
Sbjct 1738 CCTGGCCAGGGCTGCCCCAGTCCTTTGGTGCCCGGTGAGCGCAGCCAGCAGGAGCTGAGCAGCGGGGGAGATGA 1811
Query 925 -------------------------------------------------------------------------- 924
Sbjct 1812 ATCACCTCCTGCCTTGGCGAGGCGGCAGCTCATTGTTTACAGGCAAGCCCTGCTCCTGGGAGGGCTCCTGCCAC 1885
Query 925 -------------------------------------------------------------------------- 924
Sbjct 1886 CCCACCCTTCCTCTGTGTGTTATCTCTGCCCCACAGCAGCCCCTGGGCAGCACCAGTGGCCACTGGGCTCCCCC 1959
Query 925 -------------------------------------------------------------------------- 924
Sbjct 1960 CGGGGTTGAAACGGGTTTCCCAGACCAGGGGTTCAGAGGAGACTATTTACCCTTCATGATCTTTGGCGATTCTC 2033
Query 925 -------------------------------------------------------------------------- 924
Sbjct 2034 CACTGGAGCGGAAGGGCTGTGTGTCAAAAGAAGGAAGCCAGGCTGTGAAGGGCCGTGTTGCTTTCAGTGGGTGG 2107
Query 925 -------------------------------------------------------------------------- 924
Sbjct 2108 GCAGAGGTTTAGAAAGGTGGTTCTGAAATGGCACCTGGTACTCTTGTGGGACCTGGGGAATATAAGGAACTCTG 2181
Query 925 -------------------------------------------------------------------------- 924
Sbjct 2182 TGCATGAGGTTTCAAAAATAAAAATTGAGTCCACTCTCCCCGTACACACACACTCGGGCACTTCAGGAGGTCAG 2255
Query 925 -------------------------------------------------------------------------- 924
Sbjct 2256 TTCTCACCCCTTCCTCGATGGGGCTTTAAAGCTCTGGGGAGAAGAGCTGCTCCCCACTCATGCCCCAGAGGGAC 2329
Query 925 -------------------------------------------------------------------------- 924
Sbjct 2330 TGTGAAAAGGCTTCCTGTGACCTCCGATGGCGGCCCCTCATTGGCCAAGGGCACTGTGGATGTTTTGTGGGAGG 2403
Query 925 -------------------------------------------------------------------------- 924
Sbjct 2404 CAGCATGGCACCGTGGAAAGGGCAGTAGACGTGGAGCCGGCACCTCTGGTCTGGATTCCACTTAAAACCAGTTG 2477
Query 925 -------------------------------------------------------------------------- 924
Sbjct 2478 AGTGGTCTCAAGCCCTTAACCTCTGTAAGCCTGTTTCTTCTCTGAAATCACAGTAATAAAGCGTCGTAAGATGG 2551
Query 925 -------------------------------------------------------------------------- 924
Sbjct 2552 TTGGGAAGAACCAGAGGTGACTTATGCAAAAGCTTTATAAACTGTAAAGTTCCTGCCAGTGAAAAAAAAAAAAA 2625
Query 925 -------------------- 924
Sbjct 2626 AAAAAAAAAAAAAAAAAAAA 2645
