Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_03390
- Subject:
- NR_045673.1
- Aligned Length:
- 5550
- Identities:
- 548
- Gaps:
- 4943
Alignment
Query 1 -----------------ATGACAGACTCGGCGACAGCTAACGGGGA--CGACAGGGACCCCGAGATCGAGCTCT 55
||| |.||||| | |.|||||||.|...|.|.|.|| |..
Sbjct 1 CAAAGTCATTGCCCTCCATG--------------AACTAAC----AATCTACAGGGAGCTGTAAAACAAG-TAC 55
Query 56 TTGTGAA------------GGCTGGAATC------------GATGGAGAAAGCATCGGCAACTGTCCTTTCTCT 105
.||||.| ||.|.||||| |.||.|.|| ||||..|.
Sbjct 56 ATGTGCAATTCCCGGCCTGGGTTTGAATCCCAGCACTTCTAGCTGCACAA----------------CTTTACCC 113
Query 106 CAGCGCC----TCTTCATGATCCTCTGG--CTGAAAGGAGTCGTGTTCAATG----TCAC---CA----CTGTG 162
.||.|.| ||||..|||.||||||| |||.| || |||..|||| |.|| || ||.|
Sbjct 114 AAGAGGCTTATTCTTTCTGAGCCTCTGGCTCTGCA-----TC-TGTAAAATGGACTTTACATTCAGTTTCTTT- 180
Query 163 GATCTGAAAAGAAAGCCAGCTGACCTG----CACAACCTAGCCCCCGGCACGCACCCGCCCTTCCTGACCTTCA 232
|||||..||.| ||||| |||| .|.|| || .||||.| ||||.
Sbjct 181 -ATCTGGCAATA-----AGCTG-CCTGTGGAAAGAA---AG------------------GCTTCTT---CTTCC 223
Query 233 ACGGGGACGTGAAGACAGACGTCAATAAGATC----------GAGGAGTTCCTGG-----------AGGAGAC- 284
| |||||.|...|| || |.|||| |||| |||.|||
Sbjct 224 A-------------ACAGATGAGTAT----TCTGCAGTGTGTGGGGAG---CTGGCAGTGTGATGAAGGGGACA 277
Query 285 -----CTTGACCCCTGAAAAG-TACCCCAAACTGGCTGCAAAACACCGGGA----ATCCAACACAGCGGGCA-- 346
||.|| || || |||.|||..||| ||.||.|...|| ||||| |.||||
Sbjct 278 GGATTCTAGA----TG---AGCTACTCCACTCTG-----AAGACCCTATGACTGTATCCA------CTGGCAAG 333
Query 347 ----TCGACAT-------CTTTTCCAAGT-TTTCTGCCTACATCAAAAATACCAAGCAGCAGAACAATGCTGCT 408
|.|| || ||||| |.| |||| ||.||| |||
Sbjct 334 AAGTTTGA-ATAAAGGCCCTTTT---ACTCTTTC--------------ATGCCA-----------------GCT 372
Query 409 CTTGAAAGAGGCCTAACCAAGGCTCTAAAGAAATTGGATGACTACCTGAACACCCCTCTACCAGAGGAGATTGA 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 373 CTTGAAAGAGGCCTAACCAAGGCTCTAAAGAAATTGGATGACTACCTGAACACCCCTCTACCAGAGGAGATTGA 446
Query 483 CGCCAACACTTGTGGGGAAGACAAGGGGTCCCGGCGCAAGTTCCTGGATGGGGATGAGCTGACCCTGGCTGACT 556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 447 CGCCAACACTTGTGGGGAAGACAAGGGGTCCCGGCGCAAGTTCCTGGATGGGGATGAGCTGACCCTGGCTGACT 520
Query 557 GCAATCTGTTGCCCAAGCTCCATGTGGTC-----------------------------------AAGATTGTGG 595
||||||||||||||||||||||||||||| ||||||||||
Sbjct 521 GCAATCTGTTGCCCAAGCTCCATGTGGTCAAGACCCACCTTCTCACTTCCTCCAGCAACTTCCTAAGATTGTGG 594
Query 596 CCAAGAAATACCGCAACTATGATATCCCGGCTGAGATGACAGGCCTGTGGCGGTACCTCAAGAACGCCTATGCC 669
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 595 CCAAGAAATACCGCAACTATGATATCCCGGCTGAGATGACAGGCCTGTGGCGGTACCTCAAGAACGCCTATGCC 668
Query 670 CGTGATGAGTTCACCAACACCTGTGCAGCTGACAGTGAGATCGAGTTGGCCTACGCTGATGTCGCCAAACGCCT 743
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 669 CGTGATGAGTTCACCAACACCTGTGCAGCTGACAGTGAGATCGAGTTGGCCTACGCTGATGTCGCCAAACGCCT 742
Query 744 CAGCCGATCC---------------------------------------------------------------- 753
||||||||||
Sbjct 743 CAGCCGATCCTGAGCACAGCCATTTTGCCCCATCCCCGCTGCAGAAGGACTCAACCACTCCCCTAAGACTCCAG 816
Query 754 -------------------------------------------------------------------------- 753
Sbjct 817 CTTCATAGACTCCTCTGTATCACTGCCTTGAGGCGCACTTTTTATAATCAAGCCTCATCTTGCTGGTATCATGG 890
Query 754 -------------------------------------------------------------------------- 753
Sbjct 891 GAACTCCAGCCTGCTATCTTTCATGAAGGTCAGCACCATCCCTGGCCTCCTCACATAGGAATCTAGCAGAAATG 964
Query 754 -------------------------------------------------------------------------- 753
Sbjct 965 ATAGACACAGTCCACCTTTCGGCCGGCCAGCCTGATCTGGGCTCAGCATGTTTGGGGTCAGTCAGTGTTGGAGA 1038
Query 754 -------------------------------------------------------------------------- 753
Sbjct 1039 GCCCACATATGGGATTGCCACTAGCTTCTTCTGCCAATATCAAAATACCTTCTCAGATGCTTTAGAAACATGCA 1112
Query 754 -------------------------------------------------------------------------- 753
Sbjct 1113 ACACCAACTCCTTTTCTACCCTCCTCTCCGTCCATACCTACAAGGCCAAGGACAAACGCCATCTTCATCCTTCT 1186
Query 754 -------------------------------------------------------------------------- 753
Sbjct 1187 TAGAAAGAGATCTATTACCCCATTAGGGGAGACAGAGAGAGTGAATGGAGGAGTACCGAGCTGGCTATGGACTT 1260
Query 754 -------------------------------------------------------------------------- 753
Sbjct 1261 GGGTGTCTGGCAAACACAGCTTCAGTCTCACTACTTCTGACACTCTGGTTATTGGGCACTAAGGGCCAGACTGG 1334
Query 754 -------------------------------------------------------------------------- 753
Sbjct 1335 AAAGTCACTTGAGACACATTCTCAGTTTGTTGCAGTGCCAGGAATGCTGCGCTGCTGCTGCTGCGCACCTGGCC 1408
Query 754 -------------------------------------------------------------------------- 753
Sbjct 1409 CATGCTGTCCCTGGCTTCCATGCCGTCCAGGCCCTGCCAGAAAAGGAAATTGGCATGCAATTCTAAACTGCAGT 1482
Query 754 -------------------------------------------------------------------------- 753
Sbjct 1483 GACTGGGATGGGAGGGGAGGGGAGCAGTGTTGATGCCAAAATACCCACGGGGTCTACCAGCCATGGGGTTTGCT 1556
Query 754 -------------------------------------------------------------------------- 753
Sbjct 1557 TGCTTAGGAGTAGTTGTTTCAGAGGTGATTACAGGCCTGGGTTTGACTGTGCTTACCAATGAGTGGTTTTTGAG 1630
Query 754 -------------------------------------------------------------------------- 753
Sbjct 1631 CTATGAGAAAGTGGATGGGAGTGGGAGGAGGAGAGATGGGTGAAGACAAAAGAGTTCTTTATGAGCCTCGATGT 1704
Query 754 -------------------------------------------------------------------------- 753
Sbjct 1705 TCCCTGGTAAACTTTTAAAAAGGCCTTCTCTCATGATCTAAGTCTTGGACTGGTGGCATCATGTAACTGCTAAC 1778
Query 754 -------------------------------------------------------------------------- 753
Sbjct 1779 CTTACAGTAAAAACCCAAGAATGGGTCAAAAATGTCTTCCCAGTTTCTCCAAGCTGCTTCTGGAATGCAGGTCT 1852
Query 754 -------------------------------------------------------------------------- 753
Sbjct 1853 GTCGGCTGGGTGCTCTCCAGCAGCTGCTCCTGCCTGATTCAACTGTAGCCTGTAATGGGTAAAAGCCACATTTA 1926
Query 754 -------------------------------------------------------------------------- 753
Sbjct 1927 GGAGGTGGTCTGATCATAGAACACCTTAGGAAGAAAGTCCATGAGACTTTCTGACTAGGAAACCATGTGGTTTG 2000
Query 754 -------------------------------------------------------------------------- 753
Sbjct 2001 AACTTGAAGAAAAATGTAGACCCATCTGGGTTAATTTTCCTACAATCTGACTCAACTGCCAGGTGAAAAAAAAA 2074
Query 754 -------------------------------------------------------------------------- 753
Sbjct 2075 AGGAAAAATTTTTAAGCTAATATTTCACTCTTTTGTCATTCTCCTTAAGTTTCATCTCCTAAAAAGCTTACCCA 2148
Query 754 -------------------------------------------------------------------------- 753
Sbjct 2149 GCCTGAGCTTGGGGACCTGTGCAGAGGAAACTAAGAAAAATGCACTCATCAACTCCTTCTCCCAGTGAACGCCC 2222
Query 754 -------------------------------------------------------------------------- 753
Sbjct 2223 GGTGAGAAAATCCATTTGCCACAGGCCCTTACCTTCAACAATCCCCCTTCTATAGTGTTCGCTGGTAAAGGGTG 2296
Query 754 -------------------------------------------------------------------------- 753
Sbjct 2297 AGGCTCCCAAGTGCTGGAAAGCCCCTGGACTTGGCTCATTTCTCAGCAAGGGCAGGATAGCACGGGTCCTTTCC 2370
Query 754 -------------------------------------------------------------------------- 753
Sbjct 2371 ATAGAAATATCAACAAATTCTAACCCAAGCAATCCCTGGACCTACCTGCCTCCAGGGATCTCTGAAGAAAAAAA 2444
Query 754 -------------------------------------------------------------------------- 753
Sbjct 2445 GTAACCCATTGATCAAATCAGAGGAGAGGAAGCAGGAGGTCTCCTAGAGCCCATTGAGGAAGAGGAACTTTCTC 2518
Query 754 -------------------------------------------------------------------------- 753
Sbjct 2519 AGTAGGACACTTTATAAGCCTGAGAAAGCTTTGAAAAGGCGGAATGAGTTGATTCATTTCCACCTCAAAAGGAA 2592
Query 754 -------------------------------------------------------------------------- 753
Sbjct 2593 CCTTTCCAGGTCCCCCTGGAAATTGTGCCCTGGAGATGTTTAACAAGGAGAACTGGTGAGGAAAGAGTCCTTTT 2666
Query 754 -------------------------------------------------------------------------- 753
Sbjct 2667 TTACTGTAGGGAAAAGCCCCAAACTGGCCTCCTGGGGGATGAGGGCTGAAATGATCCCGAAGGCCTTTTAATTA 2740
Query 754 -------------------------------------------------------------------------- 753
Sbjct 2741 GTGTGAAATCCTGCTGTACTCAGAAATCCTTCCCCGAATTTACAGCACAGGCAGGATGACCTAAGAGGCAGTTT 2814
Query 754 -------------------------------------------------------------------------- 753
Sbjct 2815 ACTTCCCTGAGACCCACAGTTGGGCTGTTCTGGAAACACATCTGTGAATCATAGCCAATTGCCACAGAGAAAAC 2888
Query 754 -------------------------------------------------------------------------- 753
Sbjct 2889 AGAACCAAGCCTCCGGTGAGGCCACTCCACCCCAGAGAAGTCTGCAGAATTCCAAGGACTCGGATTGGATGTTC 2962
Query 754 -------------------------------------------------------------------------- 753
Sbjct 2963 AGAATTCAGCAACTGGAAAGTCCTTAAAAACAAACAGGCCAAACCAAATCAATATTGCTGTTTCTAGATGTCCC 3036
Query 754 -------------------------------------------------------------------------- 753
Sbjct 3037 TTCTGTGGTTGAGCTAGTTTTACAGAGATAAATATATTAAGACAAGGAGGTGGGGGTGTTATATGATCAATGAT 3110
Query 754 -------------------------------------------------------------------------- 753
Sbjct 3111 AGCCATTTGAAAGAGAGGGAGGAGTACAGAAGGAAGGCACTTCTGGGTACTTAATTCAGAAATTTCTTTATATT 3184
Query 754 -------------------------------------------------------------------------- 753
Sbjct 3185 TCAGCACTGGATTATCATATAATGCAAGTGACTATGGACTAAGAGTTAGTTATGGTGTCTTATGACTAGATTTA 3258
Query 754 -------------------------------------------------------------------------- 753
Sbjct 3259 TTATGGTATATTAAAGTAACAATAATATTAATATTACCTTCCTTTTTTTTTTTGTTTCAAAAGAGATCTTTCTC 3332
Query 754 -------------------------------------------------------------------------- 753
Sbjct 3333 CAGATGCTTCAGCCTGTCTGGCCTTCTTATCATATGTGCAGCACATCATGTCTCAGCAACAGTGTGGTGAGGTC 3406
Query 754 -------------------------------------------------------------------------- 753
Sbjct 3407 CTTAGGTGTCCCAAGAACAACTCAGGGAGCACGGGAGGGTCTGCAGTTGGGACCCCACAACTATACAGCTATAG 3480
Query 754 -------------------------------------------------------------------------- 753
Sbjct 3481 GGTAGGAGGCTTCCTTTTCATTGGTCCTGAATGAATACAAATCGCTCAGAAAGCATTTTGGTGGCACAGAAAGG 3554
Query 754 -------------------------------------------------------------------------- 753
Sbjct 3555 GGATGTATTTGTGTTGAGATCTTATTTTATTTTGTATTTATTTATCTTCTTTGACTTGCACAGCACTATTGGGG 3628
Query 754 -------------------------------------------------------------------------- 753
Sbjct 3629 GTGGGGGAAGCAGGGTAGTGGGAGACGAAGGCAGAAGCAAGAGTCAAACTCAGAATGACTGAGTTGAATTCACT 3702
Query 754 -------------------------------------------------------------------------- 753
Sbjct 3703 GTCTAGTCAGCAATGCCTGCTTCTGAGTTTGGCCCAGAGAGAAGGTATTGAGTAAGATTTTAATAACTGTAAAA 3776
Query 754 -------------------------------------------------------------------------- 753
Sbjct 3777 AGTAAGCTGGATAAGTAAAATCATGATGGATCCAAAGCACAGTTTCTTCATCTCCTGATAAAGAAAGTCAAATG 3850
Query 754 -------------------------------------------------------------------------- 753
Sbjct 3851 CTTGATAAATTCAGAGTCACAGATGTGAGCATAGCTATATTCTTTTAAACGAGAGGTAGAGTGACCTAGCACTA 3924
Query 754 -------------------------------------------------------------------------- 753
Sbjct 3925 AGCAAATGAGCTGAAATGTCGGAAACAGAGTCCATCAGCTTATTTGGCCACACGATCCCAAACTAGTTTTATCT 3998
Query 754 -------------------------------------------------------------------------- 753
Sbjct 3999 TGGGAAATGGCCCTGTCCTCAGCATTCCCTTCTTGTGCTGGTGGGGCCAGTGAAGTCTTGATCTTATCAGAAAA 4072
Query 754 -------------------------------------------------------------------------- 753
Sbjct 4073 AGGCCACACCAAGTGCGAGTTTTCCCAGGCTGACTTTCCAGGCCCTTATCAAATGAAACAACAGAAGCTCTTCA 4146
Query 754 -------------------------------------------------------------------------- 753
Sbjct 4147 CAGTTCTGTGCCCCATGGCCACTCCACAGACAGACAATACCAAGCATCTTAGAACTGTCATAAGATAGGTCATG 4220
Query 754 -------------------------------------------------------------------------- 753
Sbjct 4221 CCTGAAATAGATCTTGACCATATGAGAGTCCCAGAAATCAGCAAGGCCTGGACAAATAGAACTAAGAGAGAGGC 4294
Query 754 -------------------------------------------------------------------------- 753
Sbjct 4295 AGAGGCAGGAAGCTGCGGGTCTATCTTGTAAAGAGTTTAGCATCACTGTGAGAGTGTGTGTCTAAAATTAAATT 4368
Query 754 -------------------------------------------------------------------------- 753
Sbjct 4369 AAACTAGAAGCAGCAGGTGAGTATTTGGTAAGTACTTCTGTGACTCGCCTCAATTCCCACTGGCCAGGGGCCAT 4442
Query 754 -------------------------------------------------------------------------- 753
Sbjct 4443 CTCAACTGCACGGTGAATCAAGATGCTGGTGTCATCCTCCTTGGAAAAAGGAAATGTTAACTCATGGTTAAAAC 4516
Query 754 -------------------------------------------------------------------------- 753
Sbjct 4517 TAAGTACAATGATTCCCAAGGGATCACTTTCTTATTTTTTTAAATGACATTAAGGAGAATCTTAAGAAAGCATC 4590
Query 754 -------------------------------------------------------------------------- 753
Sbjct 4591 AGAGAAAGACATGTGCATGTGAAGCACCCTGATTCTGATGTTAGGAAAACTTAAGCGAACAGGACCTGCTGCAC 4664
Query 754 -------------------------------------------------------------------------- 753
Sbjct 4665 ACAGCCCCATTGTCTTCTATCCATTTCTCTTTATCATTCAAATCAAGCAACATGTGCCCTCCTCATCAACACAC 4738
Query 754 -------------------------------------------------------------------------- 753
Sbjct 4739 ATTCTTCCCCTTTGTCAGTATGCATCTCCCAGCTTAGTGTCAGGATACTTTCGATTCATAATTATGTATGATCC 4812
Query 754 -------------------------------------------------------------------------- 753
Sbjct 4813 AAAGTGTGCATAATTTCATTTAACGTTAAAGAAATAGATCCAATTCCTTTCTTGCAACCAAAAATAAATAAAAT 4886
Query 754 -------------------------------------------------------------------------- 753
Sbjct 4887 ACGTTGCCTCAATATAAGGTTTGGGCTATTCTGTGTTTCTATAGAAGCAATCTGTTTTTGGTAAAATGTACTTT 4960
Query 754 -------------------------------------------------------------------------- 753
Sbjct 4961 TAAGGATCCAGTCATCTGAAGTATTTTATGTAGAGTTAGAGATTTCACAATATTGACTATACATATATTTAAAA 5034
Query 754 -------------------------------------------------------------------------- 753
Sbjct 5035 TATAAATTATCCAGCTGATGTTTGAATTTGTCTTACTTTCCTGGCCACCTCGTTGTCCTATTTTATAAGCTGGG 5108
Query 754 -------------------------------------------------------------------------- 753
Sbjct 5109 GAGTTAACTAGCTTAACAAAAGATGCTTAGCTTTTGTAAAAGAACAAGTGTTTCATTTTACAAAGACACTCCAA 5182
Query 754 -------------------------------------------------------------------------- 753
Sbjct 5183 ATGATAGTTACTTGATTTTCTCGAGACCTTTAACTATGGTGATGAATAACAGGACTTGCTTTCAAGCCTTAATA 5256
Query 754 -------------------------------------------------------------------------- 753
Sbjct 5257 AATGTAAAATGCCTTTTAATGAAGATACAGCTGAGTGTTTTCCTCATGAATCTGAACCAATTACCAATTTGTGT 5330
Query 754 -------------------------------------------------------------------------- 753
Sbjct 5331 TCCAGTCTTGATTGGTATTGACTGATTCAAATAAAGTTGGTTTATTTTCAAATATTACAAAAAAAAAAAAAAAA 5404
