Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_03390
- Subject:
- XM_011514694.3
- Aligned Length:
- 1254
- Identities:
- 461
- Gaps:
- 762
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAATGACGAAGACTACAGCACCATCTATGACACAATCCAAAATGAGAGGACGTATGAGGTTCCAGACCAGCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGAAGAAAATGAAAGTCCCCATTATGATGATGTCCATGAGTACTTAAGGCCAGAAAATGATTTATATGCCACTC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGCTGAATACCCATGAGTATGATTTTGTGTCAGTCTATACCATTAAGGGTGAAGAGACCAGCTTGGCCTCTGTC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CAGTCAGAAGACAGAGGCTACCTCCTGCCTGATGAGATATACTCTGAACTCCAGGAGGCTCATCCAGGTGAGCC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCAGGAGGACAGGGGCATCTCAATGGAAGGGTTATATTCATCAACCCAGGACCAGCAACTCTGCGCAGCAGAAC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TCCAGGAGAATGGGAGTGTGATGAAGGAAGATCTGCCTTCTCCTTCAAGCTTCACCATTCAGCACAGTAAGGCC 444
Query 1 ------------------------------------------ATGACAGACTCGGCGACAGCTAACGGGGACGA 32
.||..|||...||.|..|||| .|
Sbjct 445 TTCTCTACCACCAAGTATTCCTGCTATTCTGATGCTGAAGGTTTGGAAGAAAAGGAGGGAGCT---------CA 509
Query 33 CAGGGACCCCGAGATCGAGCTCTTTGTGAAGGCTGGAATCGATGGAGAAAGCATCGGCAACTGTCCTTTCTCTC 106
||.|.||||.|||||..|.|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 510 CATGAACCCTGAGATTTACCTCTTTGTGAAGGCTGGAATCGATGGAGAAAGCATCGGCAACTGTCCTTTCTCTC 583
Query 107 AGCGCCTCTTCATGATCCTCTGGCTGAAAGGAGTCGTGTTCAATGTCACCACTGTGGATCTGAAAAGAAAGCCA 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 584 AGCGCCTCTTCATGATCCTCTGGCTGAAAGGAGTCGTGTTCAATGTCACCACTGTGGATCTGAAAAGAAAGCCA 657
Query 181 GCTGACCTGCACAACCTAGCCCCCGGCACGCACCCGCCCTTCCTGACCTTCAACGGGGACGTGAAGACAGACGT 254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 658 GCTGACCTGCACAACCTAGCCCCCGGCACGCACCCGCCCTTCCTGACCTTCAACGGGGACGTGAAGACAGACGT 731
Query 255 CAATAAGATCGAGGAGTTCCTGGAGGAGACCTTGACCCCTGAAAAGTACCCCAAACTGGCTGCAAAACACCGGG 328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 732 CAATAAGATCGAGGAGTTCCTGGAGGAGACCTTGACCCCTGAAAAGTACCCCAAACTGGCTGCAAAACACCGGG 805
Query 329 AATCCAACACAGCGGGCATCGACATCTTTTCCAAGTTTTCTGCCTACATCAAAAATACCAAGCAGCAGAACAAT 402
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 806 AATCCAACACAGCGGGCATCGACATCTTTTCCAAGTTTTCTGCCTACATCAAAAATACCAAGCAGCAGAACAAT 879
Query 403 GCTGCTCTTGAAAGAGGCCTAACCAAGGCTCTAAAGAAATTGGATGACTACCTGAACACCCCTCTACCAGAGGA 476
||||.|.|| ||| |||.|
Sbjct 880 GCTGGTATT------------------------------------------CTG-------------CAGTG-- 896
Query 477 GATTGACGCCAACACTTGTGGGGAAGACAAGGGGTCCCGGCGCAAGT-TCCTGGATGGG-----------GATG 538
|||||||| .|.||| ||| |..||.|.||| ||||
Sbjct 897 ----------------TGTGGGGA-----------GCTGGC---AGTGTGATGAAGGGGACAGGATTCTAGATG 940
Query 539 AGCTGACCCTGGCTGACTGCAATCTGTTGCCCAAGCTCCATGTGGTCAAGATTGTGGCCAAGAAATACCGCAAC 612
|||| |||.||.|||| ||.||| |
Sbjct 941 AGCT-----------ACTCCACTCTG-------------------------------------AAGACC----C 962
Query 613 TATGA---TATCCCGGCTGAGATGACAGGCCTGTGGCGGTACCTCAAGAACGCCTATGCCCGTGATGAGTTCAC 683
||||| ||||| ||.|| |||||| || .|||.
Sbjct 963 TATGACTGTATCC-----------ACTGG---------------CAAGAA-----------GT-TTGAA----- 993
Query 684 CAACACCTGTGCAGCTGACAGTGAGATCGAGTTGGCCTACGCTGATGTCGCCAAACGCCTCAGCCGATCC 753
Sbjct 994 ---------------------------------------------------------------------- 993
