Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_03431
- Subject:
- XM_005269920.4
- Aligned Length:
- 2712
- Identities:
- 1458
- Gaps:
- 1254
Alignment
Query 1 ATGAGTGGAGGATCTCAAGTCCACATTTTTTGGGGTGCTCCAATTGCTCCACTGAAAATCACAGTATCAGAAGA 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGAGTGGAGGATCTCAAGTCCACATTTTTTGGGGTGCTCCAATTGCTCCACTGAAAATCACAGTATCAGAAGA 74
Query 75 CACAGCTTCTTTAATGTCTGTTGCTGACCCCTGGAAAAAAATTCAGCTTTTATACAGTCAACATTCTTTATATC 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CACAGCTTCTTTAATGTCTGTTGCTGACCCCTGGAAAAAAATTCAGCTTTTATACAGTCAACATTCTTTATATC 148
Query 149 TGAAGGATGAAAAACAGCACAAAAATCTTGAAAACTATAAAGTCCCAGAATCTATTGGTTCTCCAGATCTTAGT 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TGAAGGATGAAAAACAGCACAAAAATCTTGAAAACTATAAAGTCCCAGAATCTATTGGTTCTCCAGATCTTAGT 222
Query 223 GGTCATTTCTTAGCAAACTGTATGAATAGACATGTTCATGTGAAAGATGACTTTGTACGTTCTGTTTCTGAAAC 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GGTCATTTCTTAGCAAACTGTATGAATAGACATGTTCATGTGAAAGATGACTTTGTACGTTCTGTTTCTGAAAC 296
Query 297 ACAGAATATAGAATCCCAGAAGATTCACTCCTCTAGACTGAGTGATATAACTAGCTCTAATATGCAAATATGTG 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 ACAGAATATAGAATCCCAGAAGATTCACTCCTCTAGACTGAGTGATATAACTAGCTCTAATATGCAAATATGTG 370
Query 371 GATTTAAAAGCACAGTTCCGCATTTCACCGAAGAAGAAAAGTATCAAAAGCTTCTCAGTGAAAATAAAATTAGA 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GATTTAAAAGCACAGTTCCGCATTTCACCGAAGAAGAAAAGTATCAAAAGCTTCTCAGTGAAAATAAAATTAGA 444
Query 445 GATGAACAGCCTAAACATCAGCCAGATATATGTGGTAAGAACTTTAACACAAATTTGTTTCAGTTGGGCCATAA 518
|||||||||||||||||||||||||||||||||
Sbjct 445 GATGAACAGCCTAAACATCAGCCAGATATATGT----------------------------------------- 477
Query 519 ATGTGCAGCTGTGTTGGATTTGGTTTGTAGTACTGAAAAAATTAATATAGGGCCTGAAGTGGTACAAAGAGAGT 592
Sbjct 478 -------------------------------------------------------------------------- 477
Query 593 GTGTGCCAACAGAATATCATGAAATACAAAACCAGTGTTTGGGATTATTTTCCTCGAACGCAGTAGATAAGTCA 666
Sbjct 478 -------------------------------------------------------------------------- 477
Query 667 AGGTCTGAAGCAGCAGTTAGGAAGGTCTCAGACCTTAAAATATCAACTGATACAGAATTTCTCAGTATAATTAC 740
Sbjct 478 -------------------------------------------------------------------------- 477
Query 741 CTCCAGCCAGGTTGCTTTTTTAGCTCAAAAGAAAGATAAAAGGCGGAGTCCTGTAAATAAAGGGAATGTAAACA 814
Sbjct 478 -------------------------------------------------------------------------- 477
Query 815 TGGAGACTGAACCAAAGGCAAGTTACGGGGAGATAAGAATACCTGAAGAGAATTCGATTCAGCTTGATGGTTTT 888
Sbjct 478 -------------------------------------------------------------------------- 477
Query 889 ACAGAAGCATATGAAAGTGGACAAAACCAAGCATATTCCCTTGAACTTTTTAGTCCTGTTTGTCCTAAAACAGA 962
Sbjct 478 -------------------------------------------------------------------------- 477
Query 963 AAATAGCCGCATTCACATAAACTCTGATAAAGGTCTTGAAGAACATACAGGATCTCAAGAACTTTTCAGTTCTG 1036
Sbjct 478 -------------------------------------------------------------------------- 477
Query 1037 AAGATGAACTGCCACCAAATGAGATACGTATTGAGTTGTGTAGCTCAGGAATACTGTGTTCCCAACTAAATACC 1110
Sbjct 478 -------------------------------------------------------------------------- 477
Query 1111 TTCCACAAAAGTGCTATTAAAAGAAGCTGTACCTCTGAAGATAAAGTGGGCCAGTCTGAAGCTCTATCTAGAGT 1184
Sbjct 478 -------------------------------------------------------------------------- 477
Query 1185 CCTTCAAGTAGCTAAGAAAATGAAGTTGATTTCTAATGGAGGAGATTCTGCTGTAGAAATGGATCGGAGAAATG 1258
Sbjct 478 -------------------------------------------------------------------------- 477
Query 1259 TGTCTGAATTTAAGAGTATTAAAAAAACATCATTAATAAAAAACTGTGATTCTAAAAGCCAGAAGTATAATTGT 1332
Sbjct 478 -------------------------------------------------------------------------- 477
Query 1333 TTAGTCATGGTGCTATCTCCATGCCATGTGAAGGAAATAAACATAAAATTCGGACCAAATTCTGGCTCTAAAGT 1406
Sbjct 478 -------------------------------------------------------------------------- 477
Query 1407 GCCTTTAGCAACAGTTACAGTAATTGATCAATCAGAAACTAAGAAGAAGGTTTTTCTGTGGAGGACTGCAGCAT 1480
Sbjct 478 -------------------------------------------------------------------------- 477
Query 1481 TTTGGGCATTTACAGTGTTTCTTGGAGATATAATTTTACTCACAGATGTTGTTATTCATGAGGACCAATGGATT 1554
||||||||||||||||||||||||||||||
Sbjct 478 --------------------------------------------GATGTTGTTATTCATGAGGACCAATGGATT 507
Query 1555 GGCGAGACAGTACTACAATCAACATTTAGCAGTCAGTTATTAAATCTTGGGAGTTATTCATCTATTCAGCCTGA 1628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 508 GGCGAGACAGTACTACAATCAACATTTAGCAGTCAGTTATTAAATCTTGGGAGTTATTCATCTATTCAGCCTGA 581
Query 1629 AGAATATTCCAGTGTAGTTAGTGAAGTTGTACTTCAAGACTTACTGGCATATGTGTCCTCAAAACATTCCTACC 1702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 582 AGAATATTCCAGTGTAGTTAGTGAAGTTGTACTTCAAGACTTACTGGCATATGTGTCCTCAAAACATTCCTACC 655
Query 1703 TCAGAGATCTTCCTCCGAGGCAGCCTCAGAGGGTGAACAGTATAGACTTTGTAGAATTGGAGCACCTTCAACCT 1776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 656 TCAGAGATCTTCCTCCGAGGCAGCCTCAGAGGGTGAACAGTATAGACTTTGTAGAATTGGAGCACCTTCAACCT 729
Query 1777 GATGTATTAGTCCACGCAGTACTAAGAGTTGTTGATTTCACTATACTGACAGAGGCAGTATACAGTTATAGAGG 1850
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 730 GATGTATTAGTCCACGCAGTACTAAGAGTTGTTGATTTCACTATACTGACAGAGGCAGTATACAGTTATAGAGG 803
Query 1851 ACAGAAGCAGAAAAAAGTTATGTTAACAGTGGAACAGGCCCAAGATCAACATTATGCGCTTGTATTATGGGGTC 1924
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 804 ACAGAAGCAGAAAAAAGTTATGTTAACAGTGGAACAGGCCCAAGATCAACATTATGCGCTTGTATTATGGGGTC 877
Query 1925 CTGGAGCAGCCTGGTACCCTCAACTTCAAAGGAAAAA------------------------------------- 1961
|||||||||||||||||||||||||||||||||||||
Sbjct 878 CTGGAGCAGCCTGGTACCCTCAACTTCAAAGGAAAAAAGGTTATATTTGGGAATTTAAATATCTTTTTGTTCAG 951
Query 1962 -------------------------------------------------------------------------- 1961
Sbjct 952 TGCAATTACACACTAGAAAACCTAGAATTGCATACAACGCCTTGGTCATCCTGTGAGTGCTTGTTTGATGATGA 1025
Query 1962 -------------------------------------------------------------------------- 1961
Sbjct 1026 TATAAGGGCAATTACATTTAAAGCAAAATTTCAAAAAAGTGCACCCTCCTTTGTGAAGATATCAGACTTAGCAA 1099
Query 1962 ----------------------AGGAGTGGTTCTGATTAAAGCCCAGATTTCAGAGCTGGCATTTCCTATTACA 2013
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1100 CCCACCTAGAGGATAAGTGTTCAGGAGTGGTTCTGATTAAAGCCCAGATTTCAGAGCTGGCATTTCCTATTACA 1173
Query 2014 GCATCTCAGAAGATAGCGCTAAATGCTCACAGTTCTCTGAAGAGTATTTTTTCTTCTCTTCCCAACATCGTATA 2087
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1174 GCATCTCAGAAGATAGCGCTAAATGCTCACAGTTCTCTGAAGAGTATTTTTTCTTCTCTTCCCAACATCGTATA 1247
Query 2088 TACTGGTTGTGCAAAATGTGGATTGGAACTAGAAACAGATGAGAACAGGATCTACAAACAATGTTTTAGCTGCT 2161
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1248 TACTGGTTGTGCAAAATGTGGATTGGAACTAGAAACAGATGAGAACAGGATCTACAAACAATGTTTTAGCTGCT 1321
Query 2162 TGCCATTTACTATGAAGAAAATATATTATAGGCCAGCGTTAATGACTGCCATTGATGGAAGACATGATGTTTGT 2235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1322 TGCCATTTACTATGAAGAAAATATATTATAGGCCAGCGTTAATGACTGCCATTGATGGAAGACATGATGTTTGT 1395
Query 2236 ATCCGTGTAGAATCAAAGCTGATAGAGAAGATTCTTCTCAACATTTCTGCAGACTGCCTCAACAGAGTGATAGT 2309
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1396 ATCCGTGTAGAATCAAAGCTGATAGAGAAGATTCTTCTCAACATTTCTGCAGACTGCCTCAACAGAGTGATAGT 1469
Query 2310 TCCTTCCTCAGAGATCACCTATGGGATGGTCGTGGCAGACCTGTTCCACTCCTTGTTGGCAGTCAGCGCAGAAC 2383
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1470 TCCTTCCTCAGAGATCACCTATGGGATGGTCGTGGCAGACCTGTTCCACTCCTTGTTGGCAGTCAGCGCAGAAC 1543
Query 2384 CTTGTGTATTAAAGATTCAGAGCCTTTTTGTGTTAGATGAAAACAGCTATCCATTACAACAAGATTTCTCCCTC 2457
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1544 CTTGTGTATTAAAGATTCAGAGCCTTTTTGTGTTAGATGAAAACAGCTATCCATTACAACAAGATTTCTCCCTC 1617
Query 2458 CTGGATTTTTATCCTGACATTGTAAAGCATGGAGCCAATGCCCGTCTC 2505
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1618 CTGGATTTTTATCCTGACATTGTAAAGCATGGAGCCAATGCCCGTCTC 1665
