Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_03449
• Subject: XM_017316992.1
• Aligned Length: 1340
• Identities: 993
• Gaps: 235

Alignment

Query    1  ATGCTG--GCGTCTCAAGGAGTTCTCCTGCATCCTTATGG----------CGTGCCTATGATTGTACCGGCAGC  62
            ||||.|  .|.|||.|.||.|..|.|||||      .|||          ||||...|||  |||.||  ||||
Sbjct    1  ATGCAGCATCCTCTGACGGGGGCCACCTGC------GTGGCACTCCCCAACGTGGGCATG--TGTCCC--CAGC  64

Query   63  T--------CCTT-ACCTTCCTGGACTGA-TTCAGGGTAATCAGGAAGCAGCCGCTGCCCCTGACACAATGGCT  126
            |        |||| ||.||..||.|||.| ..|||||||||||||||||||||||.||||||||||||||||||
Sbjct   65  TCTCCTGTGCCTTGACTTTTATGTACTTACAGCAGGGTAATCAGGAAGCAGCCGCCGCCCCTGACACAATGGCT  138

Query  127  CAGCCTTACGCTTCGGCCCAGTTTGCTCCCCCGCAGAACGGTATCCCCGCGGAATACACGGCCCCTCATCCCCA  200
            ||||||||.||.||.||.|||||.||.||.||.|||||.||.|||||.||.||||||||||||||||||||.||
Sbjct  139  CAGCCTTATGCCTCAGCGCAGTTCGCACCACCCCAGAATGGCATCCCTGCAGAATACACGGCCCCTCATCCTCA  212

Query  201  CCCCGCGCCAGAGTACACAGGCCAGACCACGGTTCCCGAGCACACATTAAACCTGTACCCTCCCGCCCAGACGC  274
            .|||||||||||||||||.|||||||||||.||.||.||.|||||||||||||||||.|||||..|.|||||||
Sbjct  213  TCCCGCGCCAGAGTACACCGGCCAGACCACTGTCCCTGACCACACATTAAACCTGTATCCTCCTACACAGACGC  286

Query  275  ACTCCGAGCAGAGCCCGGCGGACACGAGCGCTCAGACCGTCTCTGGCACCGCCACACAGACAGATGACGCAGCA  348
            ||||.||||||||   .||.|||||.||.||.|||||||||||.|||||||||||||||||||||||.|||||.
Sbjct  287  ACTCGGAGCAGAG---TGCTGACACCAGTGCGCAGACCGTCTCCGGCACCGCCACACAGACAGATGATGCAGCC  357

Query  349  CCGACGGATGGCCAGCCCCAGACACAACCTTCTGAAAACACGGAAAACAAGTCTCAGCCCAAGCGGCTGCATGT  422
            |||||.||.||||||||||||||||||||||||||||||||.||||.||||||.||||||||||||||||||||
Sbjct  358  CCGACCGACGGCCAGCCCCAGACACAACCTTCTGAAAACACAGAAAGCAAGTCCCAGCCCAAGCGGCTGCATGT  431

Query  423  CTCCAATATCCCCTTCAGGTTCCGGGATCCGGACCTCAGACAAATGTTTGGTCAATTTGGTAAAATCTTAGATG  496
            .|||||.|||||.|||.|||||||||||||.||||||.||||||||||||||||||||||||||||.|||||||
Sbjct  432  GTCCAACATCCCTTTCCGGTTCCGGGATCCAGACCTCCGACAAATGTTTGGTCAATTTGGTAAAATATTAGATG  505

Query  497  TTGAAATTATTTTTAATGAGCGAGGCTCAAAGGGATTTGGTTTCGTAACTTTCGAAAATAGTGCCGATGCGGAC  570
            ||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||.|||||||||
Sbjct  506  TTGAAATTATTTTTAATGAGCGAGGCTCCAAGGGATTTGGTTTCGTAACTTTCGAAAATAGTGCGGATGCGGAC  579

Query  571  AGGGCGAGGGAGAAATTACACGGCACCGTGGTAGAGGGCCGTAAAATCGAGGTAAATAATGCCACAGCACGTGT  644
            |||||||||||||||||.|||||.|||||||||||||||||||||||||||||.||||||||.||||||||.||
Sbjct  580  AGGGCGAGGGAGAAATTGCACGGTACCGTGGTAGAGGGCCGTAAAATCGAGGTTAATAATGCGACAGCACGCGT  653

Query  645  AATGACAAATAAAAAGACCGTCAACCCTTATACAAATGGCTGGAAATTGAATCCAGTTGTGGGTGCAGTCTACA  718
            .|||||||||||.|||||.||||||||.||.||.||||||||||||||.||||||||||||||.||.|||||||
Sbjct  654  GATGACAAATAAGAAGACTGTCAACCCCTACACCAATGGCTGGAAATTAAATCCAGTTGTGGGCGCGGTCTACA  727

Query  719  GTCCCGAATTCTATGCAGGCACGGTCCTGTTGTGCCAGGCCAACCAGGAGGGATCTTCCATGTACAGTGCCCCC  792
            |.|||||.|||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||.||||
Sbjct  728  GCCCCGACTTCTATGCAGGCACGGTGCTGTTGTGCCAGGCCAACCAGGAGGGATCTTCCATGTACAGTGGCCCC  801

Query  793  AGTTCACTTGTATATACTTCTGCAATGCCAGGCTTCCCGTATCCAGCAGCCACCGCCGCGGCCGCCTACCGAGG  866
            |||||||||||||||||||||||||||||.||||||||.|||||.||.|||||.||.||.||.||.||||||||
Sbjct  802  AGTTCACTTGTATATACTTCTGCAATGCCTGGCTTCCCATATCCGGCCGCCACTGCTGCAGCTGCATACCGAGG  875

Query  867  GGCGCACCTGCGAGGCCGCGGTCGCACCGTGTACAACACCTTCAGGGCCGCGGCGCCCCCGCCCCCGATCCCGG  940
            |||.|||||.||||||||.|||||||||||||||||||||||||||||.||.||||||||||||||.|||||||
Sbjct  876  GGCTCACCTTCGAGGCCGTGGTCGCACCGTGTACAACACCTTCAGGGCTGCAGCGCCCCCGCCCCCAATCCCGG  949

Query  941  CCTACGGCGGAGTAGTGTATCAAGAGCCTG---TGTATGGCAATAAATTGCTGCAG--------GGTGGTTATG  1003
            ||||.|||||.||.||.||.||.||   ||   |.|||||           |||||        ||||||||||
Sbjct  950  CCTATGGCGGTGTTGTTTACCAGGA---TGGATTTTATGG-----------TGCAGACATTTATGGTGGTTATG  1009

Query 1004  CTGCATACCGCTACGCCCAGCCTACCCCTGCCACTGCCGCTGCCTACAGTGACAGAAATCAGTTCGTCTTCGTT  1077
            ||||.||||||||.||||||||.|||||||||||||||||||||||||||||                      
Sbjct 1010  CTGCGTACCGCTATGCCCAGCCCACCCCTGCCACTGCCGCTGCCTACAGTGA----------------------  1061

Query 1078  GCAGCAGATGAAATTTCTTGTAACACCTCTGCAGTTACGGACGAGTTTATGCTGCCGACCCCTACCACCACGCA  1151
                                           ||||||||||||||||||||||||||||||||||||||||.||
Sbjct 1062  -------------------------------CAGTTACGGACGAGTTTATGCTGCCGACCCCTACCACCACACA  1104

Query 1152  CTTGCTCCAGCCCCCACCTACGGCGTTGGTGCCA----------------------------------------  1185
            ||||||||||||||||||||||||||||||||||                                        
Sbjct 1105  CTTGCTCCAGCCCCCACCTACGGCGTTGGTGCCATGAATGCTTTTGCGCCCTTGACCGATGCCAAGACTAGGAG  1178

Query 1186  --------------------------------------------------------------------------  1185
                                                                                      
Sbjct 1179  CCATGCTGATGATGTGGGTCTCGTTCTTTCTTCATTGCAGGCTAGTATATACCGAGGGGGATACAACCGTTTTG  1252

Query 1186  --------  1185
                    
Sbjct 1253  CTCCATAT  1260