Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_03496
- Subject:
- XR_001751341.2
- Aligned Length:
- 1670
- Identities:
- 958
- Gaps:
- 701
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATAGCCCTTCCCCTAGGCCGGGAACCCCTCCCCCCCACCAGCCCCAGTTCCTTTATCCCTGGGCCCAACCTCCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGCCGACCCGCGGTCCAGGCCTCGGTCTCTCTCTTCGGCGGCGAGCCGCGGCCCAGACCCCGGCAGAGGACACT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGTCGGCACGTTCTCACCCCTGTCATCTCAGCCCCCTGCCTAGCTCCACCCCAGGCTTGGGAACCCGGCCCCTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ACGGCCCATTGTCCGCGGGCCCAGCCCCCGCGCTGAACGCACGCTCGCCCTTGCCCCTAACCAGCGCGTCTACC 296
Query 1 -----------------------ATGCAGCCCTCAGGCTGGGCGGCCGCCAGGGAGGCGGCGGGCCGCGACATG 51
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CCGGCAACGCGCAGTGACCTGGGATGCAGCCCTCAGGCTGGGCGGCCGCCAGGGAGGCGGCGGGCCGCGACATG 370
Query 52 CTGGCCGCCGACCTCCGGTGCAGCCTCTTCGCCTCGGCCCTGCAGAGCTACAAGCGCGACTCGGTGCTGCGGCC 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CTGGCCGCCGACCTCCGGTGCAGCCTCTTCGCCTCGGCCCTGCAGAGCTACAAGCGCGACTCGGTGCTGCGGCC 444
Query 126 CTTCCCCGCGTCCTACGCCCGCGGCGACTGTAAGGACTTTGAAGCCCTGCTTGCAGATGCCAGCAAGTTACCTA 199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CTTCCCCGCGTCCTACGCCCGCGGCGACTGTAAGGACTTTGAAGCCCTGCTTGCAGATGCCAGCAAGTTACCTA 518
Query 200 ACCTGAAAGAACTTCTCCAGTCCTCCGGAGACAACCACAAACGGGCCTGGGACCTGGTGAGCTGGATTTTATCC 273
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 ACCTGAAAGAACTTCTCCAGTCCTCCGGAGACAACCACAAACGGGCCTGGGACCTGGTGAGCTGGATTTTATCC 592
Query 274 TCAAAGGTCCTGACAATCCACAGTGCAGGGAAGGCAGAGTTTGAAAAGATCCAAAAGCTGACTGGGGCTCCTCA 347
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TCAAAGGTCCTGACAATCCACAGTGCAGGGAAGGCAGAGTTTGAAAAGATCCAAAAGCTGACTGGGGCTCCTCA 666
Query 348 CACGCCTGTTCCTGCACCGGACTTCCTGTTTGAAATTGAGTACTTTGACCCAGCCAACGCCAAATTTTATGAGA 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CACGCCTGTTCCTGCACCGGACTTCCTGTTTGAAATTGAGTACTTTGACCCAGCCAACGCCAAATTTTATGAGA 740
Query 422 CCAAAGGAGAACGAGACCTAATCTATGCATTTCATGGTAGCCGCCTAGAAAACTTCCATTCCATTATCCACAAT 495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CCAAAGGAGAACGAGACCTAATCTATGCATTTCATGGTAGCCGCCTAGAAAACTTCCATTCCATTATCCACAAT 814
Query 496 GGCCTGCACTGCCATCTGAACAAGACATCCTTGTTCGGAGAGGGGACCTACCTCACCAGTGACTTGAGCCTGGC 569
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 GGCCTGCACTGCCATCTGAACAAGACATCCTTGTTCGGAGAGGGGACCTACCTCACCAGTGACTTGAGCCTGGC 888
Query 570 CCTCATATACAGCCCCCATGGCCATGGGTGGCAGCACAGCCTCCTCGGCCCCATCCTTAGCTGTGTGGCCGTGT 643
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 CCTCATATACAGCCCCCATGGCCATGGGTGGCAGCACAGCCTCCTCGGCCCCATCCTTAGCTGTGTGGCCGTGT 962
Query 644 GTGAGGTCATTGACCATCCGGACGTCAAGTGCCAAACCAAGAAGAAGGATTCCAAGGAGATAGATCGCAGACGA 717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GTGAGGTCATTGACCATCCGGACGTCAAGTGCCAAACCAAGAAGAAGGATTCCAAGGAGATAGATCGCAGACGA 1036
Query 718 GCGAGAATCAAACATAGTGAAGGGGGAGACATCCCTCCCAAGTACTTCGTGGTCACCAATAACCAGCTGCTGCG 791
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 GCGAGAATCAAACATAGTGAAGGGGGAGACATCCCTCCCAAGTACTTCGTGGTCACCAATAACCAGCTGCTGCG 1110
Query 792 AGTGAAGTACCTCCTGGTGTATTCACAGAAGCCACCCAAGAGCAGGGCTTCGAGCCAGCTCTCCTGGTTTTCCA 865
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 AGTGAAGTACCTCCTGGTGTATTCACAGAAGCCACCCAAGAGCAGGGCTTCGAGCCAGCTCTCCTGGTTTTCCA 1184
Query 866 GCCATTGGTTTACCGTCATGATATCCCTGTATCTGCTGCTGCTGCTCATA-----------------GTGAG-- 920
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1185 GCCATTGGTTTACCGTCATGATATCCCTGTATCTGCTGCTGCTGCTCATAGACCCACCTGCCATGCTGTGAGGA 1258
Query 921 --------------------------------TGT--------------------------------------- 923
|||
Sbjct 1259 CACCCAGGCCACATAGAGAGAGTGAGGCCACATGTAGGTTTTACAGCCAGAAGCCCCACTGAAAACCAAACCTG 1332
Query 924 -------CATCAACT------CCTCTGCT----------------TTCCAACACTTTTGGAATCGTGCGA---- 964
|||||||| |.|.|.|| |||||.|||||.||||....|||.|
Sbjct 1333 CAACCAGCATCAACTGCCAAACATGTACTGAAGAGGCTGAGATGATTCCAGCACTTGTGGATGACTGCAACCAC 1406
Query 965 ---AAAGA------------------------------------------------------------------ 969
|.|||
Sbjct 1407 ATGAGAGACCCAGAGCAAGAGCTACCTAGCTGAGCCCAGTTACTCCCAGAATCATGAGAGAACTATGCAGAAAT 1480
Query 970 -------------------------------------------------------------------------- 969
Sbjct 1481 AAAAAGTGATCCTAGATGGAAAAAATGAGAGACAAGAAGGAATATGGAACAAAGAAAATGGTACATGTGTGGGT 1554
Query 970 -------------------------------------------------------------------------- 969
Sbjct 1555 AAGTCTAAACAAATGTTGTATTAACATTAATAACAATGTCTTATGGGCTTAAAAACACAGGCCAAGCATGGCGG 1628
Query 970 ------------------------------------------ 969
Sbjct 1629 CTCACACCCGTAATTGCAGCACTTTGGGAGGCCGAGATGGGC 1670
